Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0392031 Lupinus albus HOM05D003438 ORTHO05D004235 6.3e-141 504.2 277 100.0
Ca_22511_v3 Cicer arietinum L. HOM05D003438 ORTHO05D004235 9.0e-55 218.0 195 59.5
Lj4g0011234 Lotus japonicus HOM05D003438 ORTHO05D004235 1.7e-53 213.8 140 71.4
arahy.Tifrunner.gnm1.ann1.2XHE7W Arachis hypogaea HOM05D003438 ORTHO05D004235 3.8e-53 212.6 181 58.6
arahy.Tifrunner.gnm1.ann1.KJ79M0 Arachis hypogaea HOM05D003438 ORTHO05D004235 6.5e-53 211.8 181 60.2
Medtr8g069840 Medicago truncatula HOM05D003438 ORTHO05D004235 8.5e-53 211.5 161 65.8
TWI75G0189 Tripterygium wilfordii HOM05D003438 ORTHO05D004235 6.3e-40 168.7 138 56.5
COL.COLO4_27762 Corchorus olitorius HOM05D003438 ORTHO05D004235 1.8e-39 167.2 136 59.6
Glyma.15G276800 Glycine max HOM05D003438 ORTHO05D004235 4.1e-39 166.0 144 61.1
Thecc.02G318900 Theobroma cacao HOM05D003438 ORTHO05D004235 2.6e-38 163.3 136 58.8
CANSAT64G0670 Cannabis sativa HOM05D003438 ORTHO05D004235 4.5e-38 162.5 130 60.8
Duzib251G0072 Durio zibethinus HOM05D003438 ORTHO05D004235 4.5e-38 162.5 125 60.8
RcHm_v2.0_Chr4g0436931 Rosa chinensis HOM05D003438 ORTHO05D004235 5.9e-38 162.2 148 54.7
Phvul.005G022900 Phaseolus vulgaris HOM05D003438 ORTHO05D004235 1.0e-37 161.4 182 50.0
QL03p047190 Quercus lobata HOM05D003438 ORTHO05D004235 1.0e-37 161.4 146 54.1
Cfa008813 Carpinus fangiana HOM05D003438 ORTHO05D004235 1.3e-37 161.0 181 46.4
FAN17G0827 Fragaria x ananassa HOM05D003438 ORTHO05D004235 1.7e-37 160.6 128 60.2
Cpa.g.sc570.4 Carica papaya HOM05D003438 ORTHO05D004235 2.9e-37 159.8 142 57.0
Haze_11830 Corylus avellana HOM05D003438 ORTHO05D004235 2.9e-37 159.8 174 46.6
Dinv16579 Davidia involucrata HOM05D003438 ORTHO05D004235 2.9e-37 159.8 134 59.7
Dinv16582 Davidia involucrata HOM05D003438 ORTHO05D004235 2.9e-37 159.8 134 59.7
Manes.14G092500 Manihot esculenta HOM05D003438 ORTHO05D004235 5.0e-37 159.1 168 50.6
FAN07G2974 Fragaria x ananassa HOM05D003438 ORTHO05D004235 8.5e-37 158.3 128 60.2
THA.LOC104821983 Tarenaya hassleriana HOM05D003438 ORTHO05D004235 1.9e-36 157.1 142 54.9
FvH4_4g28800 Fragaria vesca HOM05D003438 ORTHO05D004235 2.5e-36 156.8 128 59.4
FAN12G2600 Fragaria x ananassa HOM05D003438 ORTHO05D004235 2.5e-36 156.8 128 59.4
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 2.5e-36 156.8 141 57.4
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 5.5e-36 155.6 184 47.8
Sed0018972 Sechium edule HOM05D003438 ORTHO05D004235 9.4e-36 154.8 141 56.0
Gohir.A03G107450 Gossypium hirsutum HOM05D003438 ORTHO05D004235 1.6e-35 154.1 138 54.3
Cfa008819 Carpinus fangiana HOM05D003438 ORTHO05D004235 2.1e-35 153.7 111 60.4
Ciclev10030492m.g Citrus clementina HOM05D003438 ORTHO05D004235 2.1e-35 153.7 126 58.7
Prupe.1G298000 Prunus persica HOM05D003438 ORTHO05D004235 2.1e-35 153.7 173 47.4
Gorai.005G148400 Gossypium raimondii HOM05D003438 ORTHO05D004235 2.7e-35 153.3 138 54.3
MD16G1052600 Malus domestica HOM05D003438 ORTHO05D004235 2.7e-35 153.3 151 51.0
PGR119G1138 Punica granatum HOM05D003438 ORTHO05D004235 3.6e-35 152.9 188 49.5
C02p25570 Brassica napus HOM05D003438 ORTHO05D004235 2.6e-33 146.7 195 44.1
CSS0008902 Camellia sinensis var. sinensis HOM05D003438 ORTHO05D004235 2.6e-33 146.7 108 63.9
CsaV3_5G033620 Cucumis sativus L. HOM05D003438 ORTHO05D004235 3.3e-33 146.4 141 53.2
Eucgr.G02401 Eucalyptus grandis HOM05D003438 ORTHO05D004235 3.3e-33 146.4 127 56.7
Thhalv10017999m.g Eutrema salsugineum HOM05D003438 ORTHO05D004235 5.7e-33 145.6 147 51.0
Aa31sc12G150 Aethionema arabicum HOM05D003438 ORTHO05D004235 7.5e-33 145.2 134 53.0
MSTRG.795 Avicennia marina HOM05D003438 ORTHO05D004235 7.5e-33 145.2 132 53.0
BolC2t08622H Brassica oleracea HOM05D003438 ORTHO05D004235 9.7e-33 144.8 195 43.6
BcaB05g24430 Brassica carinata HOM05D003438 ORTHO05D004235 1.7e-32 144.1 137 54.0
Solyc04g005180.4 Solanum lycopersicum HOM05D003438 ORTHO05D004235 2.2e-32 143.7 112 58.0
AT1G68890 Arabidopsis thaliana HOM05D003438 ORTHO05D004235 3.7e-32 142.9 139 52.5
BcaC03g15011 Brassica carinata HOM05D003438 ORTHO05D004235 3.7e-32 142.9 159 48.4
BraA02t06607Z Brassica rapa HOM05D003438 ORTHO05D004235 3.7e-32 142.9 150 50.7
Migut.L01140 Erythranthe guttata HOM05D003438 ORTHO05D004235 4.8e-32 142.5 133 51.9
Potri.010G135500 Populus trichocarpa HOM05D003438 ORTHO05D004235 6.3e-32 142.1 144 50.0
A02p15460 Brassica napus HOM05D003438 ORTHO05D004235 8.2e-32 141.7 150 50.0
Gohir.D02G132532 Gossypium hirsutum HOM05D003438 ORTHO05D004235 8.2e-32 141.7 122 57.4
Hma1.2p1_0762F.1_g214430 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 8.2e-32 141.7 106 64.2
Sabra10G0104000 Salix brachista HOM05D003438 ORTHO05D004235 8.2e-32 141.7 134 53.0
ClCG05G023390 Citrullus lanatus HOM05D003438 ORTHO05D004235 1.1e-31 141.4 141 51.8
MELO3C012178.2 Cucumis melo HOM05D003438 ORTHO05D004235 1.8e-31 140.6 141 51.1
Carub.0002s1550 Capsella rubella HOM05D003438 ORTHO05D004235 3.1e-31 139.8 150 50.0
Nitab4.5_0000149g0210 Nicotiana tabacum HOM05D003438 ORTHO05D004235 1.6e-30 137.5 103 60.2
Glyma.01G000322 Glycine max HOM05D003438 ORTHO05D004235 3.5e-30 136.3 110 66.4
SalBow8G3833 Salvia bowleyana HOM05D003438 ORTHO05D004235 5.9e-30 135.6 124 52.4
Actinidia30181 Actinidia chinensis HOM05D003438 ORTHO05D004235 7.7e-30 135.2 111 58.6
Lj3C1025G4 Lonicera japonica HOM05D003438 ORTHO05D004235 2.2e-29 133.7 114 54.4
Ah.12g061030 Amaranthus hybridus HOM05D003438 ORTHO05D004235 2.9e-29 133.3 181 40.9
Glyma.15G277502 Glycine max HOM05D003438 ORTHO05D004235 5.0e-29 132.5 110 65.5
SGA_v2.0_scaffold16G07841 Striga asiatica HOM05D003438 ORTHO05D004235 6.5e-29 132.1 150 45.3
Ah.12g061020 Amaranthus hybridus HOM05D003438 ORTHO05D004235 8.5e-29 131.7 122 51.6
AUR62007840 Chenopodium quinoa HOM05D003438 ORTHO05D004235 8.5e-29 131.7 111 56.8
CAN.G822.4 Capsicum annuum HOM05D003438 ORTHO05D004235 1.9e-28 130.6 111 53.2
Nitab4.5_0000591g0090 Nicotiana tabacum HOM05D003438 ORTHO05D004235 2.5e-28 130.2 103 57.3
Rhsim09G0118400 Rhododendron simsii HOM05D003438 ORTHO05D004235 7.2e-28 128.6 132 52.3
unitig_699.g19901 Utricularia gibba HOM05D003438 ORTHO05D004235 9.4e-28 128.3 114 50.9
AUR62003033 Chenopodium quinoa HOM05D003438 ORTHO05D004235 3.6e-27 126.3 111 54.1
GSVIVG01010143001 Vitis vinifera HOM05D003438 ORTHO05D004235 2.3e-26 123.6 160 44.4
Cc11_g11300 Coffea canephora HOM05D003438 ORTHO05D004235 3.0e-26 123.2 119 50.4
Sc04g0007220 Simmondsia chinensis HOM05D003438 ORTHO05D004235 9.8e-25 118.2 126 44.4
TAR629G1044 Trochodendron aralioides HOM05D003438 ORTHO05D004235 1.8e-23 114.0 129 46.5
Hund25139 Selenicereus undatus HOM05D003438 ORTHO05D004235 7.0e-23 112.1 108 47.2
DCAR_023734 Daucus carota HOM05D003438 ORTHO05D004235 2.0e-22 110.5 107 50.5
ECA234G3211 Erigeron canadensis HOM05D003438 ORTHO05D004235 2.7e-22 110.2 108 47.2
HanXRQChr16g0528311 Helianthus annuus HOM05D003438 ORTHO05D004235 3.5e-22 109.8 110 50.0
Atru.chr11.1518 Acer truncatum HOM05D003438 ORTHO05D004235 7.7e-22 108.6 88 60.2
Lsat_1_v5_gn_4_21341 Lactuca sativa HOM05D003438 ORTHO05D004235 7.7e-22 108.6 107 50.5
Peaxi162Scf00396g01322 Petunia axillaris HOM05D003438 ORTHO05D004235 1.9e-20 104.0 124 41.9
MBI14_g11750_MAGBIO Magnolia biondii HOM05D003438 ORTHO05D004235 3.6e-19 99.8 113 45.1
Nn4g23587 Nelumbo nucifera HOM05D003438 ORTHO05D004235 4.0e-18 96.3 101 51.5
PSO478G2917 Papaver somniferum HOM05D003438 ORTHO05D004235 6.8e-18 95.5 124 43.5
PSO017G4740 Papaver somniferum HOM05D003438 ORTHO05D004235 4.4e-17 92.8 124 42.7
Glyma.U045802 Glycine max HOM05D003438 ORTHO05D004235 1.3e-16 91.3 76 65.8
SEGI_10147 Sequoiadendron giganteum HOM05D003553 ORTHO05D005072 2.8e-16 90.1 137 39.4
SEGI_27806 Sequoiadendron giganteum HOM05D003553 ORTHO05D005072 2.8e-16 90.1 137 39.4
CDE02G4531 Ceratophyllum demersum HOM05D003438 ORTHO05D004235 8.6e-13 78.6 113 38.9
Os02g0581400 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 7.3e-12 75.5 156 30.1
HPP92_019428 Vanilla planifolia HOM05D003438 ORTHO05D004235 9.5e-12 75.1 114 36.8
MD13G1054200 Malus domestica HOM05D003438 ORTHO05D022225 2.9e-08 63.5 69 49.3
SEGI_02517 Sequoiadendron giganteum HOM05D003553 ORTHO05D005072 2.9e-08 63.5 129 34.1
ATR0691G173 Amborella trichopoda HOM05D003438 ORTHO05D004235 1.4e-07 61.2 105 37.1
Cpa.g.sc48.236 Carica papaya HOM05D003438 ORTHO05D022225 7.8e-06 55.5 67 44.8
Cpa.g.sc878.3 Carica papaya HOM05D003438 ORTHO05D022225 7.8e-06 55.5 67 44.8


User provided reference genes

Program Settings