Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 9.0e-109 397.1 229 100.0
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 1.2e-97 360.1 229 84.3
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 2.1e-97 359.4 229 91.3
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 6.0e-97 357.8 229 89.1
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 3.9e-96 355.1 229 86.5
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 1.5e-95 353.2 230 89.6
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 1.5e-95 353.2 229 83.8
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 9.7e-95 350.5 231 83.1
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 9.7e-95 350.5 231 83.1
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 1.3e-94 350.1 230 86.5
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 2.8e-94 349.0 231 87.9
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 1.8e-93 346.3 230 87.0
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 2.4e-93 345.9 230 82.6
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 3.1e-93 345.5 229 85.6
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 9.0e-93 344.0 230 82.6
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 3.4e-92 342.0 230 82.2
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 1.0e-91 340.5 229 88.2
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 1.7e-91 339.7 230 80.9
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 5.0e-91 338.2 233 81.1
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 1.4e-90 336.7 231 84.8
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.4e-90 336.7 229 82.1
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 1.9e-90 336.3 230 87.0
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 4.2e-90 335.1 235 80.0
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 1.2e-89 333.6 229 78.6
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 4.6e-89 331.6 230 80.9
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 4.6e-89 331.6 230 83.5
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 6.1e-89 331.3 246 74.8
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 1.8e-88 329.7 230 85.7
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 3.0e-88 328.9 232 81.0
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 6.7e-88 327.8 231 81.0
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 8.8e-88 327.4 231 85.7
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 8.8e-88 327.4 231 81.0
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 1.5e-87 326.6 230 80.9
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 1.5e-87 326.6 231 77.9
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 2.5e-87 325.9 231 77.9
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 3.3e-87 325.5 229 78.6
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 4.3e-87 325.1 233 80.7
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 4.3e-87 325.1 230 79.1
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 1.3e-86 323.6 230 80.4
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 1.7e-86 323.2 231 77.1
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 2.2e-86 322.8 229 79.0
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 3.7e-86 322.0 232 78.0
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 3.7e-86 322.0 230 78.3
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 4.8e-86 321.6 230 79.1
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 6.3e-86 321.2 231 77.9
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 1.1e-85 320.5 229 78.6
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 1.1e-85 320.5 232 77.6
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.4e-85 320.1 231 76.6
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 2.4e-85 319.3 232 77.2
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 2.4e-85 319.3 232 77.2
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 3.1e-85 318.9 231 79.2
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 3.1e-85 318.9 231 76.2
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 5.3e-85 318.2 232 76.7
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 6.9e-85 317.8 231 76.2
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 6.9e-85 317.8 231 80.5
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 9.1e-85 317.4 232 76.7
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 9.1e-85 317.4 234 81.6
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 9.1e-85 317.4 234 78.2
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 2.0e-84 316.2 232 76.7
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 2.6e-84 315.8 232 78.4
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 2.6e-84 315.8 231 76.6
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 3.4e-84 315.5 230 78.3
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 3.4e-84 315.5 233 80.3
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.4e-84 315.5 233 80.3
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 3.4e-84 315.5 231 78.4
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 4.5e-84 315.1 232 81.9
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 4.5e-84 315.1 232 80.2
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 5.9e-84 314.7 232 76.3
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 5.9e-84 314.7 232 76.3
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 5.9e-84 314.7 231 80.1
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 7.7e-84 314.3 229 77.7
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 7.7e-84 314.3 234 79.9
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 1.0e-83 313.9 233 76.0
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 1.0e-83 313.9 233 76.0
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 1.3e-83 313.5 229 80.8
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.7e-83 313.2 235 78.7
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 2.9e-83 312.4 230 76.1
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 2.9e-83 312.4 234 79.9
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 6.5e-83 311.2 232 75.9
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 6.5e-83 311.2 232 75.9
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 1.1e-82 310.5 229 75.1
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 2.5e-82 309.3 230 81.7
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 2.5e-82 309.3 231 79.2
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 3.2e-82 308.9 243 73.3
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 4.2e-82 308.5 233 76.0
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 1.2e-81 307.0 229 70.3
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 1.6e-81 306.6 229 70.7
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 2.1e-81 306.2 232 76.7
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 2.1e-81 306.2 234 78.2
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 3.6e-81 305.4 230 80.4
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 3.6e-81 305.4 232 75.0
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 3.6e-81 305.4 232 74.1
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 7.9e-81 304.3 232 74.6
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 1.4e-80 303.5 231 74.5
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 1.8e-80 303.1 230 79.6
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 2.3e-80 302.8 231 76.6
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 6.7e-80 301.2 229 74.7
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 8.8e-80 300.8 230 73.9
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 1.5e-79 300.1 225 80.4
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 5.7e-79 298.1 237 77.2
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 5.7e-79 298.1 231 77.9
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 7.4e-79 297.7 233 73.8
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 7.4e-79 297.7 229 69.0
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 7.4e-79 297.7 234 78.2
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 7.4e-79 297.7 234 78.2
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 2.2e-78 296.2 233 78.5
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 2.8e-78 295.8 284 59.9
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 2.8e-78 295.8 233 76.4
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 4.8e-78 295.0 232 76.7
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.8e-78 295.0 229 76.0
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 1.4e-77 293.5 231 67.5
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 2.4e-77 292.7 232 70.3
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 4.1e-77 292.0 231 77.9
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 1.0e-75 287.3 229 75.1
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.7e-75 286.6 229 72.1
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 2.2e-75 286.2 229 71.2
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 2.2e-75 286.2 251 63.3
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 5.0e-75 285.0 229 71.2
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 7.2e-74 281.2 229 66.8
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 2.1e-73 279.6 232 71.1
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 3.6e-73 278.9 232 75.0
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 1.4e-72 276.9 233 69.1
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.3e-72 276.2 229 75.5
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 6.7e-72 274.6 217 78.3
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 8.8e-72 274.2 232 63.4
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.5e-71 273.5 229 75.1
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 2.6e-71 272.7 232 68.5
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 3.3e-71 272.3 229 75.1
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.4e-71 271.2 229 74.7
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.3e-70 270.4 229 74.2
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 3.7e-70 268.9 271 64.6
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 1.2e-68 263.8 229 66.4
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.2e-68 263.8 233 74.2
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 2.6e-68 262.7 229 72.1
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 3.5e-68 262.3 232 72.4
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 5.0e-67 258.5 229 70.7
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 4.0e-64 248.8 231 65.8
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 6.1e-57 224.9 188 70.2
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 3.0e-56 222.6 186 72.0
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 6.3e-54 214.9 254 57.1
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 8.3e-54 214.5 149 82.6
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 3.1e-53 212.6 122 86.9
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.6e-52 210.3 231 61.5
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 7.7e-52 208.0 187 69.0
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 2.9e-51 206.1 238 59.2
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 6.6e-51 204.9 149 79.9
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 4.7e-49 198.7 121 82.6
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.7e-46 190.3 121 79.3
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 8.3e-46 188.0 234 53.8
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 7.0e-45 184.9 241 52.3
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.0e-43 178.7 113 82.3
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 6.6e-43 178.3 113 81.4
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.3e-42 174.9 113 80.5
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 2.8e-41 172.9 155 73.5
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 2.6e-39 166.4 123 74.8
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 3.9e-35 152.5 174 60.9
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 8.6e-35 151.4 93 81.7
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.1e-34 151.0 95 80.0
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 2.0e-31 140.2 96 76.0
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 1.3e-30 137.5 70 91.4
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 9.2e-29 131.3 70 88.6
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 2.8e-25 119.8 229 42.8
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 2.3e-24 116.7 178 48.9
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.1e-24 116.3 184 48.9
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 2.0e-23 113.6 146 48.6
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 4.4e-23 112.5 88 68.2
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 5.8e-23 112.1 96 66.7
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 7.6e-23 111.7 72 76.4
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 5.1e-19 99.0 74 73.0
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 8.6e-19 98.2 227 35.7
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 2.6e-15 86.7 44 93.2
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 6.4e-14 82.0 56 73.2
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 1.0e-11 74.7 65 56.9
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 2.3e-11 73.6 110 39.1
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.3e-10 69.3 94 53.2
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.8e-09 66.6 89 47.2
Zm00001eb225910 Zea mays HOM05D003885 ORTHO05D444501 7.6e-07 58.5 49 65.3


User provided reference genes

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