Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0384901 Lupinus albus HOM05D000215 ORTHO05D005049 3.7e-82 308.1 155 100.0
Lalb_Chr05g0219391 Lupinus albus HOM05D000215 ORTHO05D005049 3.9e-55 218.4 155 74.8
Ca_18723_v3 Cicer arietinum L. HOM05D000215 ORTHO05D005049 7.8e-48 194.1 155 67.1
Ca_30815_v3 Cicer arietinum L. HOM05D000215 ORTHO05D005049 7.8e-48 194.1 155 67.1
Psat7g127320 Pisum sativum HOM05D000215 ORTHO05D005049 4.3e-46 188.3 155 67.7
Lj4g0017059 Lotus japonicus HOM05D000215 ORTHO05D005049 1.6e-45 186.4 151 64.9
Phvul.002G092600 Phaseolus vulgaris HOM05D000215 ORTHO05D005049 2.8e-45 185.7 157 65.0
VMungo0251G2432 Vigna mungo HOM05D000215 ORTHO05D005049 4.8e-45 184.9 154 64.9
Medtr4g485520 Medicago truncatula HOM05D000215 ORTHO05D005049 1.8e-44 183.0 155 67.1
arahy.Tifrunner.gnm1.ann1.0GVW71 Arachis hypogaea HOM05D000215 ORTHO05D005049 2.7e-40 169.1 175 56.6
TPR.G35411 Trifolium pratense HOM05D000001 ORTHO05D000003 1.7e-39 166.4 123 73.2
Thecc.02G280200 Theobroma cacao HOM05D000215 ORTHO05D005049 5.1e-31 138.3 154 50.0
Prupe.1G323500 Prunus persica HOM05D000215 ORTHO05D005049 2.1e-29 132.9 158 46.2
Thhalv10018269m.g Eutrema salsugineum HOM05D000215 ORTHO05D005049 8.1e-29 131.0 141 51.8
Sed0000487 Sechium edule HOM05D000215 ORTHO05D005049 8.1e-29 131.0 153 49.7
BcaB03g14174 Brassica carinata HOM05D000215 ORTHO05D005049 1.1e-28 130.6 141 51.8
C07p20750 Brassica napus HOM05D000215 ORTHO05D005049 1.4e-28 130.2 117 59.0
BolC7t42606H Brassica oleracea HOM05D000215 ORTHO05D005049 1.4e-28 130.2 117 59.0
Carub.0001s2253 Capsella rubella HOM05D000215 ORTHO05D005049 1.8e-28 129.8 147 51.7
Carub.0002s1783 Capsella rubella HOM05D000215 ORTHO05D005049 1.8e-28 129.8 147 49.7
CARHR023410 Cardamine hirsuta HOM05D000215 ORTHO05D005049 1.8e-28 129.8 149 51.0
ECA233G5564 Erigeron canadensis HOM05D000215 ORTHO05D005049 2.4e-28 129.4 137 51.1
BcaC06g35010 Brassica carinata HOM05D000215 ORTHO05D005049 4.0e-28 128.6 117 58.1
ClCG07G006340 Citrullus lanatus HOM05D000215 ORTHO05D005049 4.0e-28 128.6 160 48.8
AT1G23030 Arabidopsis thaliana HOM05D000215 ORTHO05D005049 5.3e-28 128.3 147 51.7
CiPaw.05G248800 Carya illinoinensis HOM05D000215 ORTHO05D005049 5.3e-28 128.3 140 52.9
MD16G1029300 Malus domestica HOM05D000215 ORTHO05D005049 5.3e-28 128.3 159 44.0
Aa31LG4G10030 Aethionema arabicum HOM05D000215 ORTHO05D005049 6.9e-28 127.9 147 49.7
AT1G71020 Arabidopsis thaliana HOM05D000215 ORTHO05D005049 6.9e-28 127.9 147 49.0
AL1G36600 Arabidopsis lyrata HOM05D000215 ORTHO05D005049 1.2e-27 127.1 147 51.7
GSVIVG01011767001 Vitis vinifera HOM05D000215 ORTHO05D005049 1.2e-27 127.1 138 49.3
C06p45140 Brassica napus HOM05D000215 ORTHO05D005049 2.6e-27 125.9 140 49.3
BolC6t39571H Brassica oleracea HOM05D000215 ORTHO05D005049 2.6e-27 125.9 140 49.3
AL2G30590 Arabidopsis lyrata HOM05D000215 ORTHO05D005049 3.4e-27 125.6 147 47.6
Manes.17G075700 Manihot esculenta HOM05D000215 ORTHO05D005049 4.5e-27 125.2 156 44.2
QL01p001904 Quercus lobata HOM05D000215 ORTHO05D005049 4.5e-27 125.2 139 50.4
Sp5g26190 Schrenkiella parvula HOM05D000215 ORTHO05D005049 4.5e-27 125.2 141 52.5
A07p14090 Brassica napus HOM05D000215 ORTHO05D005049 5.8e-27 124.8 140 52.1
A09p41690 Brassica napus HOM05D000215 ORTHO05D005049 7.6e-27 124.4 147 48.3
BraA09t39658Z Brassica rapa HOM05D000215 ORTHO05D005049 7.6e-27 124.4 147 48.3
Sp1g20480 Schrenkiella parvula HOM05D000215 ORTHO05D005049 7.6e-27 124.4 141 50.4
BraA07t31301Z Brassica rapa HOM05D000215 ORTHO05D005049 1.0e-26 124.0 140 48.6
Atru.chr11.435 Acer truncatum HOM05D000215 ORTHO05D005049 1.3e-26 123.6 137 49.6
BcaB07g32300 Brassica carinata HOM05D000215 ORTHO05D005049 1.7e-26 123.2 147 49.7
BcaC05g26214 Brassica carinata HOM05D000215 ORTHO05D005049 1.7e-26 123.2 147 49.7
C05p22240 Brassica napus HOM05D000215 ORTHO05D005049 1.7e-26 123.2 147 49.7
BolC5t30924H Brassica oleracea HOM05D000215 ORTHO05D005049 1.7e-26 123.2 147 49.7
Rhsim09G0098300 Rhododendron simsii HOM05D000215 ORTHO05D005049 1.7e-26 123.2 138 48.6
Cfa008599 Carpinus fangiana HOM05D000215 ORTHO05D005049 2.2e-26 122.9 154 46.8
Duzib251G0104 Durio zibethinus HOM05D000215 ORTHO05D005049 2.2e-26 122.9 148 45.3
BraA07t29167Z Brassica rapa HOM05D000215 ORTHO05D005049 2.9e-26 122.5 140 50.7
Dinv12997 Davidia involucrata HOM05D000215 ORTHO05D005049 2.9e-26 122.5 151 51.0
PGR119G1977 Punica granatum HOM05D000215 ORTHO05D005049 2.9e-26 122.5 159 45.3
TWI79G1266 Tripterygium wilfordii HOM05D000215 ORTHO05D005049 2.9e-26 122.5 137 46.0
A07p37430 Brassica napus HOM05D000215 ORTHO05D005049 3.8e-26 122.1 140 49.3
Oeu059505.1 Olea europaea HOM05D000215 ORTHO05D005049 3.8e-26 122.1 136 52.2
BcaB03g14864 Brassica carinata HOM05D000215 ORTHO05D005049 6.5e-26 121.3 141 49.6
Eucgr.G02194 Eucalyptus grandis HOM05D000215 ORTHO05D005049 6.5e-26 121.3 160 46.2
THA.LOC104823016 Tarenaya hassleriana HOM05D000215 ORTHO05D005049 6.5e-26 121.3 147 48.3
Gohir.A01G153100 Gossypium hirsutum HOM05D000215 ORTHO05D005049 8.4e-26 120.9 137 49.6
Nitab4.5_0004776g0040 Nicotiana tabacum HOM05D000215 ORTHO05D005049 8.4e-26 120.9 145 47.6
Sed0005333 Sechium edule HOM05D000215 ORTHO05D005049 8.4e-26 120.9 157 47.1
TWI75G0005 Tripterygium wilfordii HOM05D000215 ORTHO05D005049 1.1e-25 120.6 147 42.9
Cpa.g.sc65.125 Carica papaya HOM05D000215 ORTHO05D005049 1.4e-25 120.2 144 48.6
Migut.E00414 Erythranthe guttata HOM05D000215 ORTHO05D005049 1.4e-25 120.2 138 48.6
Gorai.002G180200 Gossypium raimondii HOM05D000215 ORTHO05D005049 1.4e-25 120.2 137 48.9
Aa31LG7G7030 Aethionema arabicum HOM05D000215 ORTHO05D005049 2.5e-25 119.4 147 49.0
CsaV3_5G013610 Cucumis sativus L. HOM05D000215 ORTHO05D005049 2.5e-25 119.4 165 45.5
Dinv05164 Davidia involucrata HOM05D000215 ORTHO05D005049 3.2e-25 119.0 152 46.1
Gohir.D01G145900 Gossypium hirsutum HOM05D000215 ORTHO05D005049 3.2e-25 119.0 137 48.9
RcHm_v2.0_Chr4g0441091 Rosa chinensis HOM05D000215 ORTHO05D005049 3.2e-25 119.0 145 47.6
CSS0030029 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D005049 7.1e-25 117.9 149 45.6
Lsat_1_v5_gn_8_43480 Lactuca sativa HOM05D000215 ORTHO05D005049 9.3e-25 117.5 141 49.6
FvH4_4g32300 Fragaria vesca HOM05D000215 ORTHO05D005049 1.2e-24 117.1 151 47.0
FAN12G4249 Fragaria x ananassa HOM05D000215 ORTHO05D005049 1.2e-24 117.1 151 47.0
FAN17G1245 Fragaria x ananassa HOM05D000215 ORTHO05D005049 1.2e-24 117.1 151 45.7
TWI31G1284 Tripterygium wilfordii HOM05D000215 ORTHO05D005049 1.2e-24 117.1 137 45.3
MSTRG.892 Avicennia marina HOM05D000215 ORTHO05D005049 2.1e-24 116.3 123 49.6
Nitab4.5_0001832g0010 Nicotiana tabacum HOM05D000215 ORTHO05D005049 2.1e-24 116.3 136 49.3
MELO3C018328.2 Cucumis melo HOM05D000215 ORTHO05D005049 2.7e-24 115.9 167 43.7
FAN22G1930 Fragaria x ananassa HOM05D000215 ORTHO05D005049 2.7e-24 115.9 143 45.5
FAN07G2877 Fragaria x ananassa HOM05D000215 ORTHO05D005049 3.5e-24 115.5 151 46.4
Solyc04g007640.3 Solanum lycopersicum HOM05D000215 ORTHO05D005049 3.5e-24 115.5 147 46.3
Sopen04g002720 Solanum pennellii HOM05D000215 ORTHO05D005049 3.5e-24 115.5 147 46.3
Haze_11014 Corylus avellana HOM05D000215 ORTHO05D005049 4.6e-24 115.2 181 42.0
Lj6A747G70 Lonicera japonica HOM05D000215 ORTHO05D005049 4.6e-24 115.2 145 49.0
Hma1.2p1_1319F.1_g275230 Hydrangea macrophylla HOM05D000215 ORTHO05D005049 6.0e-24 114.8 136 48.5
Nitab4.5_0007425g0030 Nicotiana tabacum HOM05D000215 ORTHO05D005049 7.9e-24 114.4 136 48.5
Actinidia14961 Actinidia chinensis HOM05D000215 ORTHO05D005049 1.0e-23 114.0 140 47.9
PGSC0003DMG400005987 Solanum tuberosum HOM05D000215 ORTHO05D005049 1.0e-23 114.0 136 48.5
MSTRG.13577 Avicennia marina HOM05D000215 ORTHO05D005049 1.8e-23 113.2 137 49.6
Potri.008G128600 Populus trichocarpa HOM05D000215 ORTHO05D005049 1.8e-23 113.2 140 48.6
Sabra08G0097400 Salix brachista HOM05D000215 ORTHO05D005049 1.8e-23 113.2 153 45.1
Solyc05g008230.3 Solanum lycopersicum HOM05D000215 ORTHO05D005049 1.8e-23 113.2 145 44.8
Cc11_g08810 Coffea canephora HOM05D000215 ORTHO05D005049 5.1e-23 111.7 145 45.5
Sopen05g004080 Solanum pennellii HOM05D000215 ORTHO05D005049 6.7e-23 111.3 145 44.1
PGSC0003DMG400030547 Solanum tuberosum HOM05D000215 ORTHO05D005049 6.7e-23 111.3 145 44.1
CSS0019138 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D005049 1.1e-22 110.5 140 47.1
HanXRQChr08g0212691 Helianthus annuus HOM05D000215 ORTHO05D005049 1.1e-22 110.5 137 43.8
Potri.010G113900 Populus trichocarpa HOM05D000215 ORTHO05D005049 1.1e-22 110.5 140 48.6
COL.COLO4_20472 Corchorus olitorius HOM05D000215 ORTHO05D005049 1.5e-22 110.2 156 44.2
Lj3A874G70 Lonicera japonica HOM05D000215 ORTHO05D005049 1.5e-22 110.2 151 44.4
HanXRQChr10g0317191 Helianthus annuus HOM05D000215 ORTHO05D005049 1.9e-22 109.8 148 43.2
Sabra10G0083800 Salix brachista HOM05D000215 ORTHO05D005049 1.9e-22 109.8 153 45.1
SGA_v2.0_scaffold39G15157 Striga asiatica HOM05D000215 ORTHO05D005049 2.5e-22 109.4 137 48.2
SGA_v2.0_scaffold38G15075 Striga asiatica HOM05D000215 ORTHO05D005049 4.3e-22 108.6 142 45.8
Nn3g18206 Nelumbo nucifera HOM05D000215 ORTHO05D005049 9.6e-22 107.5 137 43.1
SalBow8G1830 Salvia bowleyana HOM05D000215 ORTHO05D005049 9.6e-22 107.5 139 43.2
MSTRG.2182 Avicennia marina HOM05D000215 ORTHO05D005049 1.6e-21 106.7 154 45.5
SGA_v2.0_scaffold50G18525 Striga asiatica HOM05D000215 ORTHO05D005049 2.1e-21 106.3 172 39.0
arahy.Tifrunner.gnm1.ann1.HRHY9P Arachis hypogaea HOM05D000215 ORTHO05D005049 3.7e-21 105.5 152 46.1
Thhalv10007104m.g Eutrema salsugineum HOM05D000215 ORTHO05D005049 4.8e-21 105.1 142 45.8
Lsat_1_v5_gn_3_54620 Lactuca sativa HOM05D000215 ORTHO05D005049 8.2e-21 104.4 145 42.8
TAR629G2870 Trochodendron aralioides HOM05D000215 ORTHO05D005049 8.2e-21 104.4 138 46.4
DCAR_026770 Daucus carota HOM05D000215 ORTHO05D005049 5.3e-20 101.7 157 40.1
Sc04g0005660 Simmondsia chinensis HOM05D000215 ORTHO05D005049 9.0e-20 100.9 141 43.3
HanXRQChr15g0488651 Helianthus annuus HOM05D000215 ORTHO05D005049 1.2e-19 100.5 155 40.0
DCAR_023611 Daucus carota HOM05D000215 ORTHO05D005049 4.5e-19 98.6 149 38.9
Nn4g24128 Nelumbo nucifera HOM05D000215 ORTHO05D005049 4.5e-19 98.6 137 38.7
EL10Ac6g14228 Beta vulgaris HOM05D000215 ORTHO05D005049 1.3e-18 97.1 160 38.1
Ah.03g137260 Amaranthus hybridus HOM05D000215 ORTHO05D005049 1.7e-18 96.7 130 43.1
ECA246G5272 Erigeron canadensis HOM05D000215 ORTHO05D005049 1.7e-18 96.7 138 39.9
Aqoxy3G04037 Aquilegia oxysepala HOM05D000215 ORTHO05D005049 2.9e-18 95.9 137 40.9
TAR019G0002 Trochodendron aralioides HOM05D000215 ORTHO05D005049 2.9e-18 95.9 137 42.3
DCAR_007288 Daucus carota HOM05D000215 ORTHO05D005049 5.0e-18 95.1 145 38.6
Oeu022839.1 Olea europaea HOM05D000215 ORTHO05D005049 5.0e-18 95.1 109 49.5
Hund24986 Selenicereus undatus HOM05D000215 ORTHO05D005049 5.0e-18 95.1 152 41.4
vmacro10640 Vaccinium macrocarpon HOM05D000215 ORTHO05D005049 1.3e-15 87.0 154 37.7
CARHR064310 Cardamine hirsuta HOM05D000215 ORTHO05D005049 1.8e-15 86.7 142 39.4
AUR62041234 Chenopodium quinoa HOM05D000215 ORTHO05D005049 1.1e-14 84.0 130 39.2
AUR62014201 Chenopodium quinoa HOM05D000215 ORTHO05D005049 1.5e-14 83.6 130 39.2
Ciclev10014584m.g Citrus clementina HOM05D000215 ORTHO05D005049 5.7e-14 81.6 145 34.5
unitig_8.g3990 Utricularia gibba HOM05D000215 ORTHO05D005049 9.7e-14 80.9 143 41.3
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 2.8e-13 79.3 151 37.1
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 6.3e-13 78.2 132 40.9
CsaV3_5G028570 Cucumis sativus L. HOM05D000215 ORTHO05D005049 6.3e-13 78.2 147 36.7
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 6.3e-13 78.2 106 43.4
MELO3C005318.2 Cucumis melo HOM05D000215 ORTHO05D005049 1.4e-12 77.0 147 37.4
CAN.G359.11 Capsicum annuum HOM05D000215 ORTHO05D005049 9.0e-12 74.3 62 59.7
CDE05G3230 Ceratophyllum demersum HOM05D000215 ORTHO05D005049 9.0e-12 74.3 124 40.3
QL08p021062 Quercus lobata HOM05D001314 ORTHO05D001165 1.2e-11 73.9 103 46.6
Zm00001eb190130 Zea mays HOM05D000215 ORTHO05D005049 2.0e-11 73.2 136 34.6
Os02g0732200 Oryza sativa ssp. japonica HOM05D000215 ORTHO05D005049 1.0e-10 70.9 138 34.1
Sed0019410 Sechium edule HOM05D000215 ORTHO05D005049 8.5e-10 67.8 137 33.6
CDE05G1855 Ceratophyllum demersum HOM05D000215 ORTHO05D005049 1.9e-09 66.6 124 35.5
Actinidia13026 Actinidia chinensis HOM05D000215 ORTHO05D005049 4.2e-09 65.5 47 63.8
SMO270G0065 Selaginella moellendorffii HOM05D000215 ORTHO05D001676 1.2e-08 63.9 120 39.2
Peaxi162Scf00253g01410 Petunia axillaris HOM05D000215 ORTHO05D005049 1.4e-07 60.5 151 32.5
BolC1t03267H Brassica oleracea HOM05D000215 ORTHO05D001676 2.3e-07 59.7 129 34.1
A01p26270 Brassica napus HOM05D000215 ORTHO05D001676 3.0e-07 59.3 129 34.9
BraA01t02552Z Brassica rapa HOM05D000215 ORTHO05D001676 3.0e-07 59.3 129 34.9
SEGI_34272 Sequoiadendron giganteum HOM05D000215 ORTHO05D001676 3.0e-07 59.3 122 36.9
HPP92_009643 Vanilla planifolia HOM05D000215 ORTHO05D005049 3.9e-07 58.9 111 32.4
BcaB05g23562 Brassica carinata HOM05D000215 ORTHO05D001676 5.1e-07 58.5 129 32.6
BcaC09g49749 Brassica carinata HOM05D000215 ORTHO05D001676 5.1e-07 58.5 129 33.3
C01p33340 Brassica napus HOM05D000215 ORTHO05D001676 5.1e-07 58.5 129 33.3
COL.COLO4_17935 Corchorus olitorius HOM05D000215 ORTHO05D004644 6.7e-07 58.2 113 36.3
MD13G1026300 Malus domestica HOM05D000215 ORTHO05D005049 8.8e-07 57.8 40 62.5
ATR0022G047 Amborella trichopoda HOM05D000215 ORTHO05D001676 1.1e-06 57.4 119 31.9
Duzib132G0739 Durio zibethinus HOM05D000215 ORTHO05D004644 1.1e-06 57.4 113 36.3
BcaC01g01912 Brassica carinata HOM05D000215 ORTHO05D001676 1.5e-06 57.0 142 34.5
C03p70680 Brassica napus HOM05D000215 ORTHO05D001676 1.5e-06 57.0 142 34.5
BolC3t19313H Brassica oleracea HOM05D000215 ORTHO05D001676 1.5e-06 57.0 142 34.5
Glyma.10G208200 Glycine max HOM05D000215 ORTHO05D001676 1.5e-06 57.0 137 35.0
Prupe.8G178000 Prunus persica HOM05D000215 ORTHO05D004644 1.5e-06 57.0 156 32.7
Aa31LG4G15510 Aethionema arabicum HOM05D000215 ORTHO05D001676 2.0e-06 56.6 144 30.6
arahy.Tifrunner.gnm1.ann1.JKJ6M9 Arachis hypogaea HOM05D000215 ORTHO05D001676 2.0e-06 56.6 108 38.9
arahy.Tifrunner.gnm1.ann1.U5RGLT Arachis hypogaea HOM05D000215 ORTHO05D001676 2.0e-06 56.6 108 38.9
BcaB01g01012 Brassica carinata HOM05D000215 ORTHO05D001676 2.0e-06 56.6 142 34.5
SalBow1G2780 Salvia bowleyana HOM05D000215 ORTHO05D004644 2.5e-06 56.2 113 35.4
Sp5g15170 Schrenkiella parvula HOM05D000215 ORTHO05D001676 2.5e-06 56.2 120 33.3
Lsat_1_v5_gn_8_119901 Lactuca sativa HOM05D000215 ORTHO05D004644 4.3e-06 55.5 113 38.9
Manes.04G067400 Manihot esculenta HOM05D000215 ORTHO05D004644 4.3e-06 55.5 154 29.9
CiPaw.05G091500 Carya illinoinensis HOM05D000215 ORTHO05D004644 5.7e-06 55.1 113 36.3
Haze_02018 Corylus avellana HOM05D000215 ORTHO05D004644 5.7e-06 55.1 113 34.5
AL5G25380 Arabidopsis lyrata HOM05D000215 ORTHO05D001676 7.4e-06 54.7 120 33.3
Carub.0005s1278 Capsella rubella HOM05D000215 ORTHO05D001676 7.4e-06 54.7 120 33.3
Cfa005348 Carpinus fangiana HOM05D000215 ORTHO05D004644 7.4e-06 54.7 113 35.4
Dinv31227 Davidia involucrata HOM05D000215 ORTHO05D001676 7.4e-06 54.7 138 34.8
MD05G1134200 Malus domestica HOM05D000215 ORTHO05D004644 7.4e-06 54.7 119 35.3
Duzib052G0654 Durio zibethinus HOM05D000215 ORTHO05D004644 9.7e-06 54.3 113 34.5
Sabra09G0129700 Salix brachista HOM05D000215 ORTHO05D004644 9.7e-06 54.3 117 35.0
Thecc.08G060000 Theobroma cacao HOM05D000215 ORTHO05D004644 9.7e-06 54.3 119 29.4
GSVIVG01023893001 Vitis vinifera HOM05D000215 ORTHO05D004644 9.7e-06 54.3 113 35.4


User provided reference genes

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