Gene: Sopen05g004080
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen05g004080
- Transcript Identifier Sopen05g004080.1
- Gene Type Coding gene
- Location Spenn-ch05 : 2859623-2863576 : negative
Gene Family Information
- ID HOM05D000215
- #Genes/#Species 1875/100
- Phylogenetic origin
- ID ORTHO05D005049
- #Genes/#Species 165/87
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen05g004080.1
Descriptions
- Description ARM repeat superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: response to chitin | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:0090333 | ISO | PLAZA Integrative Orthology | regulation of stomatal closure | AT1G23030 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT1G23030 |
| GO:0051865 | ISO | PLAZA Integrative Orthology | protein autoubiquitination | AT1G23030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.2.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase |