Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 9.4e-270 932.9 474 100.0
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 5.5e-177 624.8 483 67.1
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 3.6e-176 622.1 477 66.9
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 6.1e-176 621.3 478 67.8
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 2.4e-172 609.4 478 67.2
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 3.1e-172 609.0 480 69.0
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.3e-170 603.6 479 67.2
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 3.9e-167 592.0 436 70.6
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 1.4e-164 583.6 480 65.4
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 3.6e-160 568.9 488 64.3
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 8.0e-160 567.8 481 63.4
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 1.2e-147 527.3 462 63.0
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 5.6e-121 438.7 479 48.9
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 7.3e-121 438.3 469 52.0
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 8.1e-120 434.9 469 48.6
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 7.5e-118 428.3 482 48.8
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 7.1e-116 421.8 479 49.7
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 3.0e-114 416.4 482 49.0
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 8.6e-114 414.8 325 65.2
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 4.3e-113 412.5 480 49.0
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 5.6e-113 412.1 465 48.6
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 6.2e-112 408.7 465 49.5
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.1e-112 408.3 488 48.4
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 3.1e-111 406.4 466 46.8
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 2.6e-110 403.3 465 48.2
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 4.4e-110 402.5 467 47.8
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.4e-109 398.3 490 47.8
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.1e-108 396.0 481 48.2
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 2.1e-107 393.7 486 47.5
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 4.6e-107 392.5 466 48.1
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 3.3e-105 386.3 463 46.7
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 1.2e-104 384.4 468 48.3
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 2.8e-104 383.3 466 47.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 8.1e-104 381.7 457 47.3
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 2.4e-103 380.2 465 47.7
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 3.1e-103 379.8 412 50.2
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 4.0e-103 379.4 465 46.7
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 6.9e-103 378.6 480 43.8
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 6.9e-103 378.6 470 44.7
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 3.4e-102 376.3 450 45.8
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 5.8e-102 375.6 466 45.7
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 7.6e-102 375.2 481 47.0
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.1e-100 371.3 491 44.0
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 9.3e-100 368.2 481 43.7
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.5e-99 366.3 455 44.8
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 6.0e-99 365.5 480 45.2
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.1e-98 362.5 468 46.2
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 8.7e-98 361.7 465 43.0
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.5e-97 360.1 466 45.3
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 2.1e-96 357.1 472 44.5
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 3.1e-95 353.2 470 42.6
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 3.1e-95 353.2 477 45.3
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 2.0e-94 350.5 479 43.2
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 4.5e-94 349.4 481 43.7
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.3e-93 347.8 478 44.6
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.2e-93 347.1 481 43.5
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 5.4e-92 342.4 498 41.4
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 2.7e-91 340.1 469 43.3
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 2.7e-91 340.1 441 44.4
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.0e-90 338.2 484 42.6
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 6.2e-88 328.9 453 42.8
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 6.9e-87 325.5 473 41.9
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.2e-86 324.7 468 39.7
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.7e-85 320.9 464 40.9
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 2.2e-85 320.5 412 43.2
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.2e-85 320.5 467 42.0
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 3.8e-85 319.7 330 50.9
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 6.4e-85 318.9 471 43.7
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 4.2e-84 316.2 403 45.2
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 2.7e-83 313.5 468 41.5
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 3.5e-83 313.2 482 40.9
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.3e-82 311.2 482 41.1
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 3.0e-82 310.1 482 40.7
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 5.1e-82 309.3 463 39.3
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.1e-81 308.1 482 40.5
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.9e-81 307.4 468 41.2
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 2.5e-81 307.0 482 41.1
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 4.3e-81 306.2 463 39.7
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 1.3e-80 304.7 479 39.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.3e-80 304.7 482 40.2
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.8e-80 303.5 468 41.7
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 3.7e-80 303.1 471 40.3
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 1.2e-78 298.1 465 40.2
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.5e-78 297.7 316 51.9
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 3.8e-77 293.1 359 49.0
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 6.5e-77 292.4 498 39.0
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.3e-74 284.6 451 39.9
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.8e-74 284.3 364 45.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.8e-74 284.3 350 46.9
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.8e-74 284.3 462 39.6
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 5.7e-73 279.3 469 38.0
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.3e-72 278.1 460 37.4
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 3.7e-72 276.6 456 38.8
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 4.1e-71 273.1 442 39.8
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.5e-70 271.2 302 47.4
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 2.6e-62 243.8 475 34.9
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 7.4e-57 225.7 312 48.7
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 9.7e-57 225.3 333 39.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 2.0e-54 217.6 158 67.1
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 6.5e-53 212.6 468 34.8
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.5e-44 184.1 160 58.1
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.1e-43 181.0 160 57.5
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.1e-43 181.0 160 57.5
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.4e-42 178.3 182 49.5
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 4.8e-40 169.9 372 34.1
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.1e-36 158.7 154 61.0
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.7e-35 153.3 118 64.4
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.7e-30 137.5 119 61.3
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 3.0e-26 124.0 225 37.8
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.7e-24 117.1 249 31.7
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 8.0e-19 99.4 78 60.3
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 1.0e-18 99.0 500 25.4
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.4e-17 93.6 162 33.3
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.4e-17 93.6 162 33.3
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 8.6e-13 79.3 82 53.7
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 1.1e-12 79.0 479 24.0
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 9.5e-12 75.9 123 36.6
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 3.6e-11 73.9 53 64.2
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 8.0e-11 72.8 113 38.1
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 4.4e-09 67.0 427 23.4
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.4e-09 67.0 112 34.8
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 4.1e-07 60.5 55 49.1
TPR.G16274 Trifolium pratense HOM05D006143 ORTHO05D007587 7.0e-07 59.7 61 50.8
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 1.2e-06 58.9 112 39.3


User provided reference genes

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