Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 3.1e-305 1051.2 628 100.0
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 4.5e-251 871.3 661 76.6
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 2.1e-240 835.9 662 73.4
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 9.0e-236 820.5 662 71.8
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 2.1e-232 809.3 663 71.0
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.0e-231 807.0 663 71.3
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 7.7e-227 790.8 662 70.2
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 8.5e-226 787.3 664 69.1
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 8.5e-226 787.3 661 66.9
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 9.4e-225 783.9 662 67.1
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 2.5e-217 759.2 662 66.6
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 1.2e-208 730.3 660 64.1
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 6.1e-208 728.0 658 63.2
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 3.7e-205 718.8 659 63.7
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 8.2e-205 717.6 667 60.7
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 7.7e-203 711.1 663 64.0
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 7.7e-203 711.1 663 64.0
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 2.2e-202 709.5 661 62.6
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 5.0e-202 708.4 661 61.9
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 2.5e-201 706.1 667 60.6
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 3.2e-201 705.7 653 61.9
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 9.4e-201 704.1 658 62.9
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 3.6e-200 702.2 662 61.5
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 6.1e-200 701.4 657 62.4
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 6.1e-200 701.4 662 64.7
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 8.0e-200 701.0 661 64.6
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 3.0e-199 699.1 661 65.5
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 4.0e-199 698.7 663 63.2
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 5.2e-199 698.4 664 62.3
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.2e-198 697.2 662 64.7
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 9.8e-198 694.1 661 62.0
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 1.4e-196 690.3 661 61.4
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 2.4e-196 689.5 673 62.0
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 4.1e-196 688.7 662 62.7
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.5e-195 685.3 661 60.4
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 5.9e-195 684.9 655 66.9
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 5.9e-195 684.9 653 60.9
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 7.7e-195 684.5 676 64.6
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 3.8e-194 682.2 659 61.6
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 8.6e-194 681.0 666 61.6
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.1e-193 680.6 661 60.1
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.1e-193 680.6 661 60.1
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 3.6e-192 675.6 661 59.8
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 1.4e-191 673.7 658 60.5
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.4e-191 673.7 659 60.1
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 4.0e-191 672.2 650 61.1
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 2.6e-190 669.5 654 58.7
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 4.4e-190 668.7 660 66.8
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 5.7e-190 668.3 656 64.8
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 3.7e-189 665.6 660 65.9
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.2e-187 660.6 543 69.8
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.2e-187 660.6 543 69.8
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 1.3e-186 657.1 676 57.1
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 1.7e-186 656.8 656 63.3
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 3.3e-185 652.5 653 58.3
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 9.5e-185 651.0 652 58.4
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 3.6e-184 649.0 657 59.5
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 4.7e-184 648.7 650 60.3
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 8.0e-184 647.9 666 58.1
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 5.2e-183 645.2 635 59.7
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 1.5e-182 643.7 650 58.2
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 2.0e-182 643.3 643 58.2
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 2.0e-182 643.3 645 61.7
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 9.8e-182 641.0 652 57.8
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 3.2e-180 636.0 651 58.8
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 2.3e-178 629.8 651 58.8
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 3.0e-178 629.4 651 58.7
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 3.9e-178 629.0 654 57.6
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 2.5e-177 626.3 652 56.1
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 5.6e-177 625.2 654 60.2
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 9.5e-177 624.4 661 58.9
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 2.1e-176 623.2 658 55.9
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 2.8e-176 622.9 649 58.6
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 3.6e-176 622.5 655 57.1
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 8.9e-175 617.8 653 59.1
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 1.5e-174 617.1 645 59.7
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 7.5e-174 614.8 655 58.8
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 2.2e-173 613.2 653 56.4
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 2.9e-173 612.8 648 55.7
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 6.4e-173 611.7 645 56.1
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 1.1e-172 610.9 654 55.4
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 1.4e-172 610.5 648 58.0
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 2.4e-172 609.8 668 57.0
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 3.2e-172 609.4 658 54.3
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.2e-172 609.4 657 53.7
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 3.2e-172 609.4 600 58.2
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 5.4e-172 608.6 653 56.8
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 7.0e-172 608.2 655 56.2
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 7.0e-172 608.2 655 56.2
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 9.2e-172 607.8 656 55.3
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 9.2e-172 607.8 656 58.5
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 1.2e-171 607.4 656 58.4
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 2.1e-171 606.7 664 56.2
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 2.7e-171 606.3 655 57.9
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.0e-170 604.4 658 54.0
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 1.3e-170 604.0 659 56.0
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 1.3e-170 604.0 654 55.4
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 6.6e-170 601.7 644 55.3
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 1.5e-169 600.5 660 55.3
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.9e-169 600.1 658 53.3
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 2.1e-168 596.7 658 53.2
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 1.1e-167 594.3 669 53.5
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 1.5e-166 590.5 635 58.1
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 2.0e-166 590.1 656 54.1
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-166 589.3 615 57.7
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 3.4e-166 589.3 651 57.0
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 4.4e-166 589.0 537 62.8
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 1.3e-165 587.4 657 55.3
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 4.6e-163 578.9 649 55.2
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 6.0e-163 578.6 638 54.2
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 1.2e-160 570.9 638 53.9
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 3.6e-160 569.3 652 54.3
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 3.6e-160 569.3 650 54.0
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 8.1e-160 568.2 672 51.5
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 1.8e-159 567.0 663 51.6
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 2.4e-159 566.6 659 50.4
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 2.0e-158 563.5 651 54.8
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 2.6e-158 563.1 656 51.5
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 4.9e-157 558.9 661 51.0
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 4.9e-157 558.9 646 58.0
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.4e-156 555.4 660 54.2
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.2e-155 554.3 657 51.0
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 1.3e-154 550.8 655 54.5
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 6.6e-154 548.5 671 51.4
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.2e-152 544.3 660 50.3
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 4.7e-152 542.3 671 50.8
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 6.2e-152 542.0 639 52.4
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 1.1e-151 541.2 649 51.8
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 3.8e-149 532.7 667 48.1
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 3.5e-147 526.2 657 52.2
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.7e-146 523.9 656 50.6
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.8e-144 515.8 689 49.9
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.2e-142 511.1 675 49.5
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.4e-140 504.2 654 49.7
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.4e-140 503.4 650 49.7
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 3.2e-140 503.1 649 48.2
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 3.5e-139 499.6 678 49.6
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 7.9e-139 498.4 678 49.0
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 3.1e-135 486.5 660 48.5
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 2.6e-134 483.4 655 48.1
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 1.7e-133 480.7 664 46.7
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 7.1e-132 475.3 533 53.7
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 7.1e-132 475.3 403 71.2
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.1e-131 473.8 641 51.8
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 7.9e-131 471.9 655 48.9
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 3.9e-130 469.5 648 51.7
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 7.4e-129 465.3 544 51.3
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.6e-128 464.2 651 46.1
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 2.0e-118 430.6 651 42.4
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 5.5e-116 422.5 596 46.3
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 4.6e-115 419.5 621 44.4
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 1.6e-99 367.9 402 56.2
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 1.8e-98 364.4 402 56.7
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 3.3e-97 360.1 418 54.3
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 5.0e-93 346.3 648 43.2
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 3.7e-88 330.1 656 39.3
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 1.3e-85 321.6 550 42.5
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 5.7e-81 306.2 537 44.1
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 4.7e-75 286.6 226 68.1
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 1.8e-74 284.6 310 53.2
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 9.2e-71 272.3 237 61.2
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 1.6e-62 245.0 381 43.0
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 6.6e-61 239.6 398 42.7
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 6.6e-53 213.0 273 45.1
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 2.8e-35 154.5 114 66.7
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 7.3e-28 129.8 78 76.9
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 6.2e-27 126.7 216 44.0
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 5.3e-26 123.6 149 50.3
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.7e-24 118.6 113 54.9
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 4.3e-20 104.0 73 67.1
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 9.0e-18 96.3 134 38.8
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.3e-16 92.4 60 70.0
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 4.9e-16 90.5 78 66.7
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 4.2e-15 87.4 281 27.4
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 4.6e-14 84.0 74 58.1
Cfa025708 Carpinus fangiana HOM05D003743 ORTHO05D004311 3.9e-13 80.9 265 27.5
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 2.1e-11 75.1 46 76.1
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 5.3e-10 70.5 126 41.3
arahy.Tifrunner.gnm1.ann1.8T1JJH Arachis hypogaea HOM05D003743 ORTHO05D004311 1.3e-08 65.9 97 47.4
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 5.0e-08 63.9 274 24.8


User provided reference genes

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