Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0381641 Lupinus albus HOM05D004350 ORTHO05D005260 4.1e-23 110.5 56 100.0
Lalb_Chr05g0216341 Lupinus albus HOM05D004350 ORTHO05D005260 3.6e-19 97.4 48 97.9
Prupe.6G201300 Prunus persica HOM05D004350 ORTHO05D005260 1.8e-18 95.1 48 89.6
Aqoxy5G01391 Aquilegia oxysepala HOM05D004350 ORTHO05D005260 4.0e-18 94.0 48 91.7
Peaxi162Scf00196g00225 Petunia axillaris HOM05D004350 ORTHO05D005260 4.0e-18 94.0 49 91.8
arahy.Tifrunner.gnm1.ann1.4PU0PP Arachis hypogaea HOM05D004350 ORTHO05D005260 5.2e-18 93.6 48 91.7
arahy.Tifrunner.gnm1.ann1.Y3UPDN Arachis hypogaea HOM05D004350 ORTHO05D005260 5.2e-18 93.6 48 91.7
CiPaw.08G140000 Carya illinoinensis HOM05D004350 ORTHO05D005260 5.2e-18 93.6 48 89.6
RcHm_v2.0_Chr2g0111251 Rosa chinensis HOM05D004350 ORTHO05D005260 8.9e-18 92.8 48 89.6
CSS0009628 Camellia sinensis var. sinensis HOM05D004350 ORTHO05D005260 1.2e-17 92.4 48 87.5
CANSAT01G3290 Cannabis sativa HOM05D004350 ORTHO05D005260 1.2e-17 92.4 48 89.6
Dinv36926 Davidia involucrata HOM05D004350 ORTHO05D005260 1.2e-17 92.4 48 87.5
Nitab4.5_0000902g0360 Nicotiana tabacum HOM05D004350 ORTHO05D005260 1.2e-17 92.4 48 89.6
Solyc04g014370.4 Solanum lycopersicum HOM05D004350 ORTHO05D005260 1.2e-17 92.4 48 89.6
Sopen04g006490 Solanum pennellii HOM05D004350 ORTHO05D005260 1.2e-17 92.4 48 89.6
PGSC0003DMG400023576 Solanum tuberosum HOM05D004350 ORTHO05D005260 1.2e-17 92.4 48 89.6
CiPaw.07G047800 Carya illinoinensis HOM05D004350 ORTHO05D005260 1.5e-17 92.0 48 85.4
MD01G1038800 Malus domestica HOM05D004350 ORTHO05D005260 1.5e-17 92.0 48 87.5
Nitab4.5_0001468g0120 Nicotiana tabacum HOM05D004350 ORTHO05D005260 1.5e-17 92.0 52 82.7
Glyma.08G279700 Glycine max HOM05D004350 ORTHO05D005260 2.0e-17 91.7 48 89.6
Glyma.18G146900 Glycine max HOM05D004350 ORTHO05D005260 2.0e-17 91.7 48 89.6
VMungo0251G2520 Vigna mungo HOM05D004350 ORTHO05D005260 2.0e-17 91.7 48 87.5
ATR0767G219 Amborella trichopoda HOM05D004350 ORTHO05D005260 2.6e-17 91.3 48 87.5
Lj4g0019109 Lotus japonicus HOM05D004350 ORTHO05D005260 2.6e-17 91.3 48 87.5
Medtr8g471160 Medicago truncatula HOM05D004350 ORTHO05D005260 2.6e-17 91.3 48 87.5
Os01g0150200 Oryza sativa ssp. japonica HOM05D004350 ORTHO05D005260 2.6e-17 91.3 48 87.5
Os04g0271200 Oryza sativa ssp. japonica HOM05D004350 ORTHO05D005260 2.6e-17 91.3 48 87.5
Phvul.003G289100 Phaseolus vulgaris HOM05D004350 ORTHO05D005260 2.6e-17 91.3 48 87.5
PGR031G0248 Punica granatum HOM05D004350 ORTHO05D005260 2.6e-17 91.3 48 87.5
Zm00001eb124340 Zea mays HOM05D004350 ORTHO05D005260 3.4e-17 90.9 48 85.4
FvH4_1g19690 Fragaria vesca HOM05D004350 ORTHO05D005260 4.4e-17 90.5 48 87.5
Hma1.2p1_0433F.1_g152050 Hydrangea macrophylla HOM05D004350 ORTHO05D005260 4.4e-17 90.5 48 83.3
GSVIVG01005931001 Vitis vinifera HOM05D004350 ORTHO05D005260 4.4e-17 90.5 48 85.4
Cpa.g.sc55.29 Carica papaya HOM05D004350 ORTHO05D005260 5.8e-17 90.1 48 85.4
CDE06G0701 Ceratophyllum demersum HOM05D004350 ORTHO05D005260 5.8e-17 90.1 48 85.4
Actinidia30847 Actinidia chinensis HOM05D004350 ORTHO05D005260 7.5e-17 89.7 48 83.3
CAN.G525.29 Capsicum annuum HOM05D004350 ORTHO05D005260 7.5e-17 89.7 48 85.4
Nitab4.5_0009469g0010 Nicotiana tabacum HOM05D004350 ORTHO05D005260 7.5e-17 89.7 48 87.5
Psat4g119600 Pisum sativum HOM05D004350 ORTHO05D005260 7.5e-17 89.7 48 85.4
PSO017G6956 Papaver somniferum HOM05D004350 ORTHO05D005260 9.8e-17 89.4 48 83.3
PSO170G2632 Papaver somniferum HOM05D004350 ORTHO05D005260 9.8e-17 89.4 48 83.3
PSO170G6309 Papaver somniferum HOM05D004350 ORTHO05D005260 9.8e-17 89.4 48 83.3
Thecc.01G091200 Theobroma cacao HOM05D004350 ORTHO05D005260 9.8e-17 89.4 48 83.3
CDE04G1055 Ceratophyllum demersum HOM05D004350 ORTHO05D005260 1.3e-16 89.0 48 83.3
CsaV3_3G006860 Cucumis sativus L. HOM05D004350 ORTHO05D005260 1.3e-16 89.0 48 83.3
Eucgr.K02898 Eucalyptus grandis HOM05D004350 ORTHO05D005260 1.3e-16 89.0 48 83.3
Sc03g0000310 Simmondsia chinensis HOM05D004350 ORTHO05D005260 1.3e-16 89.0 48 85.4
TPR.G14596 Trifolium pratense HOM05D004350 ORTHO05D005260 1.3e-16 89.0 48 85.4
Ca_22608_v3 Cicer arietinum L. HOM05D004350 ORTHO05D005260 1.7e-16 88.6 48 83.3
Cc07_g14130 Coffea canephora HOM05D004350 ORTHO05D005260 1.7e-16 88.6 48 85.4
HPP92_014310 Vanilla planifolia HOM05D004350 ORTHO05D005260 1.7e-16 88.6 48 81.2
Duzib187G1704 Durio zibethinus HOM05D004350 ORTHO05D005260 2.2e-16 88.2 48 81.2
Oeu003728.1 Olea europaea HOM05D004350 ORTHO05D005260 2.9e-16 87.8 48 85.4
Sed0019313 Sechium edule HOM05D004350 ORTHO05D005260 2.9e-16 87.8 48 83.3
VMungo1215G0627 Vigna mungo HOM05D004350 ORTHO05D005260 2.9e-16 87.8 48 83.3
Aa31LG3G16680 Aethionema arabicum HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 87.5
Aa31LG5G22920 Aethionema arabicum HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 87.5
CARHR202810 Cardamine hirsuta HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 87.5
MELO3C016419.2 Cucumis melo HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 79.2
Gohir.A11G206700 Gossypium hirsutum HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 81.2
Gohir.D11G216900 Gossypium hirsutum HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 81.2
Gorai.007G233000 Gossypium raimondii HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 81.2
Phvul.002G147400 Phaseolus vulgaris HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 81.2
Hund16535 Selenicereus undatus HOM05D004350 ORTHO05D005260 3.7e-16 87.4 48 85.4
Atru.chr3.1251 Acer truncatum HOM05D004350 ORTHO05D005260 4.9e-16 87.0 48 77.1
Cfa006886 Carpinus fangiana HOM05D004350 ORTHO05D005260 4.9e-16 87.0 51 76.5
Nn1g05564 Nelumbo nucifera HOM05D004350 ORTHO05D005260 4.9e-16 87.0 48 81.2
vmacro18559 Vaccinium macrocarpon HOM05D004350 ORTHO05D005260 4.9e-16 87.0 48 81.2
Actinidia28826 Actinidia chinensis HOM05D004350 ORTHO05D005260 6.4e-16 86.7 48 83.3
PSO170G2166 Papaver somniferum HOM05D004350 ORTHO05D005260 6.4e-16 86.7 48 79.2
EL10Ac6g15209 Beta vulgaris HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 79.2
BcaB01g05531 Brassica carinata HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 85.4
BcaB01g06282 Brassica carinata HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 85.4
BcaB08g37102 Brassica carinata HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 85.4
A03p04570 Brassica napus HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 85.4
BraA10t44761Z Brassica rapa HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 85.4
Oeu055598.1 Olea europaea HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 83.3
PSO541G1644 Papaver somniferum HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 81.2
TWI74G1117 Tripterygium wilfordii HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 81.2
TAR381G0377 Trochodendron aralioides HOM05D004350 ORTHO05D005260 8.3e-16 86.3 48 83.3
BraA03t09799Z Brassica rapa HOM05D004350 ORTHO05D005260 1.1e-15 85.9 52 78.8
AUR62003659 Chenopodium quinoa HOM05D004350 ORTHO05D005260 1.1e-15 85.9 49 79.6
PSO170G6456 Papaver somniferum HOM05D004350 ORTHO05D005260 1.1e-15 85.9 48 79.2
THA.LOC104798725 Tarenaya hassleriana HOM05D004350 ORTHO05D005260 1.1e-15 85.9 48 83.3
arahy.Tifrunner.gnm1.ann1.H8MGJA Arachis hypogaea HOM05D004350 ORTHO05D005260 1.4e-15 85.5 49 79.6
Rhsim08G0016400 Rhododendron simsii HOM05D004350 ORTHO05D005260 1.4e-15 85.5 48 79.2
C03p05130 Brassica napus HOM05D004350 ORTHO05D005260 1.9e-15 85.1 48 83.3
THA.LOC104819292 Tarenaya hassleriana HOM05D004350 ORTHO05D005260 1.9e-15 85.1 48 83.3
AagrBONN_evm.TU.Sc2ySwM_228.1037 Anthoceros agrestis HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 77.1
AL6G21000 Arabidopsis lyrata HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 83.3
AT5G10480 Arabidopsis thaliana HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 83.3
BolC3t13038H Brassica oleracea HOM05D004350 ORTHO05D005260 2.4e-15 84.7 52 76.9
Carub.0006s0896 Capsella rubella HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 83.3
AUR62017968 Chenopodium quinoa HOM05D004350 ORTHO05D005260 2.4e-15 84.7 51 76.5
Duzib264G0362 Durio zibethinus HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 77.1
Thhalv10014620m.g Eutrema salsugineum HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 83.3
Lsat_1_v5_gn_2_70580 Lactuca sativa HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 81.2
Nn5g29888 Nelumbo nucifera HOM05D004350 ORTHO05D005260 2.4e-15 84.7 48 79.2
TWI53G1737 Tripterygium wilfordii HOM05D004350 ORTHO05D005260 3.2e-15 84.3 48 77.1
Zm00001eb335910 Zea mays HOM05D004350 ORTHO05D005260 3.2e-15 84.3 49 73.5
Mapoly0034s0103 Marchantia polymorpha HOM05D004350 ORTHO05D005260 4.1e-15 84.0 48 77.1
Manes.13G099500 Manihot esculenta HOM05D004350 ORTHO05D005260 7.0e-15 83.2 48 79.2
Sabra07G0008400 Salix brachista HOM05D004350 ORTHO05D005260 7.0e-15 83.2 51 78.4
Ca_22603_v3 Cicer arietinum L. HOM05D004350 ORTHO05D005260 9.2e-15 82.8 50 74.0
SGA_v2.0_scaffold58G20514 Striga asiatica HOM05D004350 ORTHO05D005260 9.2e-15 82.8 49 73.5
SMO266G0038 Selaginella moellendorffii HOM05D004350 ORTHO05D005260 1.2e-14 82.4 52 73.1
HanXRQChr14g0442921 Helianthus annuus HOM05D004350 ORTHO05D005260 1.6e-14 82.0 48 77.1
A10p27090 Brassica napus HOM05D004350 ORTHO05D005260 2.0e-14 81.6 49 83.7
C09p66790 Brassica napus HOM05D004350 ORTHO05D005260 2.0e-14 81.6 49 83.7
BolC9t59459H Brassica oleracea HOM05D004350 ORTHO05D005260 2.0e-14 81.6 49 83.7
SalBow6G1994 Salvia bowleyana HOM05D004350 ORTHO05D005260 2.7e-14 81.3 49 73.5
ECA238G4457 Erigeron canadensis HOM05D004350 ORTHO05D005260 3.5e-14 80.9 48 79.2
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 4.6e-14 80.5 48 77.1
Potri.007G010900 Populus trichocarpa HOM05D004350 ORTHO05D005260 4.6e-14 80.5 48 79.2
Dinv13605 Davidia involucrata HOM05D004350 ORTHO05D005260 1.0e-13 79.3 48 75.0
HanXRQChr11g0346981 Helianthus annuus HOM05D004350 ORTHO05D005260 1.0e-13 79.3 48 75.0
Migut.B00221 Erythranthe guttata HOM05D004350 ORTHO05D005260 1.7e-13 78.6 48 70.8
Sp6g32950 Schrenkiella parvula HOM05D004350 ORTHO05D005260 2.3e-13 78.2 47 80.9
SGA_v2.0_scaffold32G13177 Striga asiatica HOM05D004350 ORTHO05D005260 1.5e-12 75.5 49 65.3
Os01g0150800 Oryza sativa ssp. japonica HOM05D004350 ORTHO05D005260 1.9e-12 75.1 50 68.0
Pp3c2_13410 Physcomitrium patens HOM05D004350 ORTHO05D005260 1.2e-11 72.4 48 60.4
Manes.03G203600 Manihot esculenta HOM05D004350 ORTHO05D005260 3.1e-10 67.8 46 71.7
DCAR_014186 Daucus carota HOM05D004350 ORTHO05D005260 7.5e-09 63.2 41 68.3
MD15G1312800 Malus domestica HOM05D004350 ORTHO05D005260 9.8e-09 62.8 30 93.3
ECA246G1176 Erigeron canadensis HOM05D004350 ORTHO05D005260 3.7e-08 60.8 40 65.0
FAN19G1284 Fragaria x ananassa HOM05D004350 ORTHO05D005260 3.7e-08 60.8 33 81.8
FAN19G0871 Fragaria x ananassa HOM05D004350 ORTHO05D005260 6.4e-08 60.1 30 86.7
FAN23G0465 Fragaria x ananassa HOM05D004350 ORTHO05D005260 6.4e-08 60.1 30 86.7
FAN26G2403 Fragaria x ananassa HOM05D004350 ORTHO05D005260 6.4e-08 60.1 30 86.7
FAN28G1749 Fragaria x ananassa HOM05D004350 ORTHO05D005260 6.4e-08 60.1 30 86.7
Sopen11g005390 Solanum pennellii HOM05D004350 ORTHO05D005260 6.4e-08 60.1 49 65.3


User provided reference genes

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