Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0366131 Lupinus albus HOM05D004312 ORTHO05D005394 7.8e-250 866.7 448 100.0
Lalb_Chr14g0366111 Lupinus albus HOM05D004312 ORTHO05D005394 5.7e-200 701.0 373 88.2
VMungo1215G3096 Vigna mungo HOM05D004312 ORTHO05D005394 6.1e-186 654.4 366 80.3
CiPaw.11G183600 Carya illinoinensis HOM05D004312 ORTHO05D005394 8.0e-186 654.1 364 82.7
Glyma.02G152200 Glycine max HOM05D004312 ORTHO05D005394 1.8e-185 652.9 363 81.0
Glyma.10G022000 Glycine max HOM05D004312 ORTHO05D005394 4.0e-185 651.7 363 80.7
Gohir.A13G141400 Gossypium hirsutum HOM05D004312 ORTHO05D005394 5.2e-185 651.4 362 82.6
Cfa020416 Carpinus fangiana HOM05D004312 ORTHO05D005394 6.8e-185 651.0 364 81.0
Nitab4.5_0009192g0020 Nicotiana tabacum HOM05D004312 ORTHO05D005394 1.2e-184 650.2 362 81.8
Gohir.D13G146100 Gossypium hirsutum HOM05D004312 ORTHO05D005394 1.5e-184 649.8 362 82.3
Dinv22305 Davidia involucrata HOM05D004312 ORTHO05D005394 3.4e-184 648.7 362 82.0
Thecc.07G052900 Theobroma cacao HOM05D004312 ORTHO05D005394 5.7e-184 647.9 362 82.0
Nitab4.5_0000397g0030 Nicotiana tabacum HOM05D004312 ORTHO05D005394 1.3e-183 646.7 362 81.2
Manes.15G076500 Manihot esculenta HOM05D004312 ORTHO05D005394 2.2e-183 646.0 370 81.1
arahy.Tifrunner.gnm1.ann1.IBM9RL Arachis hypogaea HOM05D004312 ORTHO05D005394 3.7e-183 645.2 369 79.7
arahy.Tifrunner.gnm1.ann1.Z28QK4 Arachis hypogaea HOM05D004312 ORTHO05D005394 3.7e-183 645.2 369 79.7
GSVIVG01014605001 Vitis vinifera HOM05D004312 ORTHO05D005394 3.7e-183 645.2 362 81.5
Cc05_g13230 Coffea canephora HOM05D004312 ORTHO05D005394 1.1e-182 643.7 362 81.2
Duzib213G0708 Durio zibethinus HOM05D004312 ORTHO05D005394 1.1e-182 643.7 362 81.8
QL08p013340 Quercus lobata HOM05D004312 ORTHO05D005394 1.1e-182 643.7 364 80.5
Ca_12696_v3 Cicer arietinum L. HOM05D004312 ORTHO05D005394 1.4e-182 643.3 365 80.0
CANSAT25G0949 Cannabis sativa HOM05D004312 ORTHO05D005394 2.4e-182 642.5 364 80.8
TPR.G33318 Trifolium pratense HOM05D004312 ORTHO05D005394 2.4e-182 642.5 365 79.7
QL08p013781 Quercus lobata HOM05D004312 ORTHO05D005394 5.4e-182 641.3 364 80.2
Eucgr.F03425 Eucalyptus grandis HOM05D004312 ORTHO05D005394 7.0e-182 641.0 361 81.2
TWI39G0013 Tripterygium wilfordii HOM05D004312 ORTHO05D005394 7.0e-182 641.0 364 80.8
PSO541G5632 Papaver somniferum HOM05D004312 ORTHO05D005394 9.1e-182 640.6 362 80.7
Sed0007148 Sechium edule HOM05D004312 ORTHO05D005394 9.1e-182 640.6 364 80.8
Psat6g038960 Pisum sativum HOM05D004312 ORTHO05D005394 1.2e-181 640.2 363 80.2
PSO675G7739 Papaver somniferum HOM05D004312 ORTHO05D005394 1.6e-181 639.8 362 80.4
CSS0011160 Camellia sinensis var. sinensis HOM05D004312 ORTHO05D005394 2.0e-181 639.4 362 81.2
FvH4_3g21810 Fragaria vesca HOM05D004312 ORTHO05D005394 3.5e-181 638.6 362 80.1
FAN11G3136 Fragaria x ananassa HOM05D004312 ORTHO05D005394 3.5e-181 638.6 362 80.1
RcHm_v2.0_Chr5g0037411 Rosa chinensis HOM05D004312 ORTHO05D005394 3.5e-181 638.6 362 80.1
MD11G1227100 Malus domestica HOM05D004312 ORTHO05D005394 1.0e-180 637.1 362 80.1
PGR031G3547 Punica granatum HOM05D004312 ORTHO05D005394 1.0e-180 637.1 362 80.1
TAR624G0412 Trochodendron aralioides HOM05D004312 ORTHO05D005394 1.0e-180 637.1 360 80.6
MD03G1211700 Malus domestica HOM05D004312 ORTHO05D005394 1.3e-180 636.7 362 79.8
Actinidia35316 Actinidia chinensis HOM05D004312 ORTHO05D005394 3.8e-180 635.2 361 79.2
Haze_09609 Corylus avellana HOM05D004312 ORTHO05D005394 6.6e-180 634.4 383 77.0
FAN25G1427 Fragaria x ananassa HOM05D004312 ORTHO05D005394 6.6e-180 634.4 362 79.3
Nn1g06998 Nelumbo nucifera HOM05D004312 ORTHO05D005394 8.6e-180 634.0 363 79.3
MBI18_g30687_MAGBIO Magnolia biondii HOM05D004312 ORTHO05D005394 1.1e-179 633.6 362 79.8
DCAR_008679 Daucus carota HOM05D004312 ORTHO05D005394 2.5e-179 632.5 362 79.6
Phvul.005G091500 Phaseolus vulgaris HOM05D004312 ORTHO05D005394 5.5e-179 631.3 366 77.3
Ciclev10008697m.g Citrus clementina HOM05D004312 ORTHO05D005394 1.6e-178 629.8 362 79.0
Potri.001G417300 Populus trichocarpa HOM05D004312 ORTHO05D005394 1.6e-178 629.8 362 79.0
THA.LOC104825403 Tarenaya hassleriana HOM05D004312 ORTHO05D005394 1.6e-178 629.8 363 78.5
PGSC0003DMG401019226 Solanum tuberosum HOM05D004312 ORTHO05D005394 2.8e-178 629.0 362 78.2
Solyc07g064090.3 Solanum lycopersicum HOM05D004312 ORTHO05D005394 3.6e-178 628.6 362 77.9
Sopen07g032230 Solanum pennellii HOM05D004312 ORTHO05D005394 3.6e-178 628.6 362 77.9
Migut.M01812 Erythranthe guttata HOM05D004312 ORTHO05D005394 4.7e-178 628.2 362 79.0
HanXRQChr11g0332981 Helianthus annuus HOM05D004312 ORTHO05D005394 6.1e-178 627.9 362 78.7
AUR62015644 Chenopodium quinoa HOM05D004312 ORTHO05D005394 4.0e-177 625.2 362 78.5
ECA236G2119 Erigeron canadensis HOM05D004312 ORTHO05D005394 5.2e-177 624.8 362 77.3
Cpa.g.sc97.70 Carica papaya HOM05D004312 ORTHO05D005394 6.8e-177 624.4 362 78.2
Lsat_1_v5_gn_7_108381 Lactuca sativa HOM05D004312 ORTHO05D005394 6.8e-177 624.4 362 78.2
Atru.chr2.3209 Acer truncatum HOM05D004312 ORTHO05D005394 1.2e-176 623.6 362 78.2
vmacro09746 Vaccinium macrocarpon HOM05D004312 ORTHO05D005394 2.0e-176 622.9 394 74.4
CDE05G1308 Ceratophyllum demersum HOM05D004312 ORTHO05D005394 5.7e-176 621.3 360 78.1
Lj3g0015514 Lotus japonicus HOM05D004312 ORTHO05D005394 3.7e-175 618.6 362 77.6
HPP92_002196 Vanilla planifolia HOM05D004312 ORTHO05D005394 3.7e-175 618.6 363 76.9
Medtr1g028310 Medicago truncatula HOM05D004312 ORTHO05D005394 4.1e-174 615.1 370 74.1
FAN21G3328 Fragaria x ananassa HOM05D004312 ORTHO05D005394 2.0e-173 612.8 411 69.8
COL.COLO4_09570 Corchorus olitorius HOM05D004312 ORTHO05D005394 2.3e-172 609.4 362 77.9
MSTRG.6890 Avicennia marina HOM05D004312 ORTHO05D005394 3.8e-172 608.6 372 75.5
SGA_v2.0_scaffold9G04799 Striga asiatica HOM05D004312 ORTHO05D005394 6.6e-172 607.8 398 71.4
Glyma.13G287200 Glycine max HOM05D004312 ORTHO05D005394 2.5e-171 605.9 362 75.1
Lj8A165T113 Lonicera japonica HOM05D004312 ORTHO05D005394 3.3e-171 605.5 345 80.3
SEGI_02518 Sequoiadendron giganteum HOM05D004312 ORTHO05D005394 3.4e-168 595.5 364 74.5
PSO384G4488 Papaver somniferum HOM05D004312 ORTHO05D005394 5.8e-168 594.7 362 77.1
arahy.Tifrunner.gnm1.ann1.08T3T7 Arachis hypogaea HOM05D004312 ORTHO05D005394 6.4e-167 591.3 369 74.8
arahy.Tifrunner.gnm1.ann1.43SLKT Arachis hypogaea HOM05D004312 ORTHO05D005394 6.4e-167 591.3 369 74.8
unitig_746.g26649 Utricularia gibba HOM05D004312 ORTHO05D005394 1.2e-165 587.0 344 77.0
EL10Ac4g07972 Beta vulgaris HOM05D004312 ORTHO05D005394 1.0e-164 583.9 407 69.8
Os08g0137100 Oryza sativa ssp. japonica HOM05D004312 ORTHO05D005394 2.5e-163 579.3 363 71.6
Aa31LG8G7480 Aethionema arabicum HOM05D004312 ORTHO05D005394 1.6e-162 576.6 369 71.3
Carub.0003s2070 Capsella rubella HOM05D004312 ORTHO05D005394 5.2e-161 571.6 360 69.7
Thhalv10020971m.g Eutrema salsugineum HOM05D004312 ORTHO05D005394 5.2e-161 571.6 360 70.6
AT3G20740 Arabidopsis thaliana HOM05D004312 ORTHO05D005394 1.5e-160 570.1 360 70.0
CsaV3_3G022910 Cucumis sativus L. HOM05D004312 ORTHO05D005394 2.6e-160 569.3 321 80.7
Sp3g18760 Schrenkiella parvula HOM05D004312 ORTHO05D005394 2.2e-159 566.2 360 70.3
AL3G34660 Arabidopsis lyrata HOM05D004312 ORTHO05D005394 3.7e-159 565.5 360 70.0
HanXRQChr15g0495681 Helianthus annuus HOM05D004312 ORTHO05D005394 8.3e-159 564.3 358 71.8
BcaB04g20634 Brassica carinata HOM05D004312 ORTHO05D005394 4.1e-158 562.0 360 69.4
A01p34090 Brassica napus HOM05D004312 ORTHO05D005394 9.2e-158 560.8 360 69.4
BraA01t03513Z Brassica rapa HOM05D004312 ORTHO05D005394 9.2e-158 560.8 360 69.4
BcaC09g49015 Brassica carinata HOM05D004312 ORTHO05D005394 2.1e-157 559.7 360 69.4
Hma1.2p1_1549F.1_g290070 Hydrangea macrophylla HOM05D004312 ORTHO05D005394 2.1e-157 559.7 307 82.7
BolC1t04310H Brassica oleracea HOM05D004312 ORTHO05D005394 2.7e-157 559.3 360 69.4
CARHR096560 Cardamine hirsuta HOM05D004312 ORTHO05D005394 3.5e-157 558.9 362 68.5
Zm00001eb416950 Zea mays HOM05D004312 ORTHO05D005394 1.3e-156 557.0 364 71.2
C01p43500 Brassica napus HOM05D004312 ORTHO05D005394 1.7e-156 556.6 360 69.2
Hund23308 Selenicereus undatus HOM05D004312 ORTHO05D005394 3.9e-156 555.4 362 71.8
ATR0073G014 Amborella trichopoda HOM05D004312 ORTHO05D005394 9.5e-155 550.8 327 76.5
RhsimUnG0253200 Rhododendron simsii HOM05D004312 ORTHO05D005394 1.2e-152 543.9 606 48.5
Pp3c24_1010 Physcomitrium patens HOM05D004312 ORTHO05D005394 3.4e-152 542.3 368 66.8
MELO3C018124.2 Cucumis melo HOM05D004312 ORTHO05D005394 4.4e-152 542.0 307 80.5
PSO339G5963 Papaver somniferum HOM05D004312 ORTHO05D005394 5.8e-152 541.6 370 70.8
Gorai.013G163900 Gossypium raimondii HOM05D004312 ORTHO05D005394 4.9e-151 538.5 303 81.2
AagrBONN_evm.TU.Sc2ySwM_117.25 Anthoceros agrestis HOM05D004312 ORTHO05D005394 1.6e-149 533.5 348 69.3
Mapoly0006s0078 Marchantia polymorpha HOM05D004312 ORTHO05D005394 2.7e-149 532.7 369 66.1
Sabra16G0283500 Salix brachista HOM05D004312 ORTHO05D005394 6.0e-149 531.6 393 65.6
Os08g0137250 Oryza sativa ssp. japonica HOM05D004312 ORTHO05D005394 1.9e-147 526.6 363 62.5
Peaxi162Scf01086g00145 Petunia axillaris HOM05D004312 ORTHO05D005394 2.5e-147 526.2 286 82.5
SalBow3G2463 Salvia bowleyana HOM05D004312 ORTHO05D005394 7.3e-147 524.6 362 68.8
AUR62020555 Chenopodium quinoa HOM05D004312 ORTHO05D005394 1.2e-146 523.9 362 68.8
Phvul.007G166700 Phaseolus vulgaris HOM05D004312 ORTHO05D005394 1.2e-146 523.9 286 81.5
Aqoxy6G01703 Aquilegia oxysepala HOM05D004312 ORTHO05D005394 8.1e-146 521.2 364 67.6
BcaB06g26144 Brassica carinata HOM05D004312 ORTHO05D005394 4.0e-145 518.8 368 62.0
Sc07g0002710 Simmondsia chinensis HOM05D004312 ORTHO05D005394 2.0e-144 516.5 305 76.7
DCAR_006577 Daucus carota HOM05D004312 ORTHO05D005394 2.2e-143 513.1 365 64.4
A05p28030 Brassica napus HOM05D004312 ORTHO05D005394 8.4e-143 511.1 362 63.5
BraA05t21685Z Brassica rapa HOM05D004312 ORTHO05D005394 1.1e-142 510.8 362 63.3
SMO347G0342 Selaginella moellendorffii HOM05D004312 ORTHO05D005394 3.2e-142 509.2 362 64.1
ClCG05G014780 Citrullus lanatus HOM05D004312 ORTHO05D005394 9.2e-142 507.7 373 66.0
BraA05t21689Z Brassica rapa HOM05D004312 ORTHO05D005394 2.7e-141 506.1 370 60.8
A05p28070 Brassica napus HOM05D004312 ORTHO05D005394 6.0e-141 505.0 370 60.8
BcaC05g28288 Brassica carinata HOM05D004312 ORTHO05D005394 2.3e-140 503.1 368 60.3
BolC5t33070H Brassica oleracea HOM05D004312 ORTHO05D005394 2.3e-140 503.1 368 60.3
C05p43470 Brassica napus HOM05D004312 ORTHO05D005394 8.7e-140 501.1 368 60.1
Zm00001eb173090 Zea mays HOM05D004312 ORTHO05D005394 2.6e-136 489.6 371 60.4
BcaC05g28285 Brassica carinata HOM05D004312 ORTHO05D005394 3.0e-132 476.1 363 59.2
Prupe.4G202200 Prunus persica HOM05D004312 ORTHO05D005394 1.8e-129 466.8 256 82.0
BolC5t33065H Brassica oleracea HOM05D004312 ORTHO05D005394 6.4e-127 458.4 362 58.3
Hma1.2p1_0562F.1_g179020 Hydrangea macrophylla HOM05D004312 ORTHO05D005394 3.0e-124 449.5 255 80.4
QL08p013465 Quercus lobata HOM05D004312 ORTHO05D005394 8.7e-124 448.0 253 80.2
BcaB06g26146 Brassica carinata HOM05D004312 ORTHO05D005394 5.5e-110 402.1 353 51.3
CBR_g21046 Chara braunii HOM05D004312 ORTHO05D005394 1.5e-107 394.0 369 55.0
BcaC05g28287 Brassica carinata HOM05D004312 ORTHO05D005394 2.2e-98 363.6 337 51.3
SalBow1G0135 Salvia bowleyana HOM05D004312 ORTHO05D005394 2.1e-93 347.1 200 79.5
A05p28060 Brassica napus HOM05D004312 ORTHO05D005394 1.8e-89 334.0 360 46.1
Glyma.12G214400 Glycine max HOM05D004312 ORTHO05D005394 5.3e-89 332.4 246 63.4
Actinidia10705 Actinidia chinensis HOM05D004312 ORTHO05D005394 4.5e-88 329.3 324 53.1
C05p43330 Brassica napus HOM05D004312 ORTHO05D005394 2.1e-77 293.9 293 48.5
BolC5t33069H Brassica oleracea HOM05D004312 ORTHO05D005394 4.8e-74 282.7 251 52.2
C05p43450 Brassica napus HOM05D004312 ORTHO05D005394 8.3e-74 282.0 248 52.8
PRCOL_00001232 Prasinoderma coloniale HOM05D004312 ORTHO05D005394 9.4e-70 268.5 399 34.1
Haze_27219 Corylus avellana HOM05D004312 ORTHO05D005394 2.1e-69 267.3 381 40.2
MCO04G236 Micromonas commoda HOM05D004312 ORTHO05D005394 5.0e-63 246.1 404 34.7
MCO04G208 Micromonas commoda HOM05D004312 ORTHO05D005394 2.3e-60 237.3 431 32.9
CsaV3_UNG229030 Cucumis sativus L. HOM05D004312 ORTHO05D005394 4.9e-58 229.6 366 40.4
Duzib116G0859 Durio zibethinus HOM05D004312 ORTHO05D005394 5.4e-49 199.5 149 65.8
QL08p013461 Quercus lobata HOM05D004312 ORTHO05D005394 1.2e-48 198.4 112 79.5
SalBow1G5971 Salvia bowleyana HOM05D004312 ORTHO05D005394 1.3e-47 194.9 113 77.9
SalBow6G7263 Salvia bowleyana HOM05D004312 ORTHO05D005394 1.3e-47 194.9 113 77.9
SalBow1G3580 Salvia bowleyana HOM05D004312 ORTHO05D005394 8.6e-47 192.2 113 77.9
Cre16.g693750 Chlamydomonas reinhardtii HOM05D004312 ORTHO05D005394 1.1e-44 185.3 480 27.7
BraA05t21687Z Brassica rapa HOM05D004312 ORTHO05D005394 2.0e-43 181.0 142 58.5
BcaC05g28286 Brassica carinata HOM05D002786 ORTHO05D005394 1.1e-38 165.2 273 33.3
Aa31LG8G7490 Aethionema arabicum HOM05D004312 ORTHO05D005394 1.4e-36 158.3 126 57.9
HanXRQChr09g0244121 Helianthus annuus HOM05D004312 ORTHO05D005394 2.6e-35 154.1 127 58.3
VMungo0251G2959 Vigna mungo HOM05D004312 ORTHO05D005394 1.6e-24 118.2 80 68.8
BraA05t21688Z Brassica rapa HOM05D004312 ORTHO05D005394 1.3e-21 108.6 118 44.9
Peaxi162Scf01086g00127 Petunia axillaris HOM05D004312 ORTHO05D005394 1.7e-18 98.2 61 75.4
CAN.G337.148 Capsicum annuum HOM05D004312 ORTHO05D005394 1.1e-17 95.5 69 66.7
Oeu062615.1 Olea europaea HOM05D004312 ORTHO05D005394 7.9e-16 89.4 54 75.9
C06p10310 Brassica napus HOM05D004312 ORTHO05D026447 4.5e-11 73.6 52 59.6
BolC6t36105H Brassica oleracea HOM05D004312 ORTHO05D026447 2.2e-10 71.2 49 61.2
Cfa024711 Carpinus fangiana HOM05D004312 ORTHO05D122356 1.6e-08 65.1 207 21.7
Aa31LG8G7500 Aethionema arabicum HOM05D004312 ORTHO05D026447 2.1e-08 64.7 56 50.0
COL.COLO4_30358 Corchorus olitorius HOM05D001315 ORTHO05D001618 2.3e-07 61.2 107 29.9
PGR102G2938 Punica granatum HOM05D000836 ORTHO05D000709 3.0e-07 60.8 109 33.0
CARHR204410 Cardamine hirsuta HOM05D001610 ORTHO05D001585 6.7e-07 59.7 145 28.3
Cre03.g180050 Chlamydomonas reinhardtii HOM05D004312 ORTHO05D044106 8.7e-07 59.3 182 25.3
BcaNung01224 Brassica carinata HOM05D000645 ORTHO05D000494 1.1e-06 58.9 95 36.8
Sp6g34330 Schrenkiella parvula HOM05D001610 ORTHO05D001585 1.5e-06 58.5 100 34.0
A06p35150 Brassica napus HOM05D000645 ORTHO05D000494 1.9e-06 58.2 99 35.4
BraA03t09740Z Brassica rapa HOM05D001610 ORTHO05D001585 1.9e-06 58.2 100 35.0
BraA06t26435Z Brassica rapa HOM05D000645 ORTHO05D000494 1.9e-06 58.2 99 35.4
Cre06.g278176 Chlamydomonas reinhardtii HOM05D003769 ORTHO05D034408 3.3e-06 57.4 118 29.7
Dinv26878 Davidia involucrata HOM05D002634 ORTHO05D003100 3.3e-06 57.4 82 41.5
Pp3c19_12460 Physcomitrium patens HOM05D004758 ORTHO05D006063 3.3e-06 57.4 99 35.4
C07p43420 Brassica napus HOM05D000645 ORTHO05D000494 4.3e-06 57.0 99 34.3
BolC7t44868H Brassica oleracea HOM05D000645 ORTHO05D000494 4.3e-06 57.0 99 34.3
Thhalv10013060m.g Eutrema salsugineum HOM05D001610 ORTHO05D001585 4.3e-06 57.0 96 35.4
arahy.Tifrunner.gnm1.ann1.C265D9 Arachis hypogaea HOM05D001610 ORTHO05D001585 5.6e-06 56.6 143 26.6
arahy.Tifrunner.gnm1.ann1.ER1LI4 Arachis hypogaea HOM05D001610 ORTHO05D001585 5.6e-06 56.6 143 26.6
arahy.Tifrunner.gnm1.ann1.PH2I0N Arachis hypogaea HOM05D000645 ORTHO05D000494 5.6e-06 56.6 104 28.8
PRCOL_00005139 Prasinoderma coloniale HOM05D005544 ORTHO05D007303 5.6e-06 56.6 107 30.8
Cc05_g00850 Coffea canephora HOM05D001610 ORTHO05D001585 7.4e-06 56.2 120 31.7
Aa31LG10G5040 Aethionema arabicum HOM05D000645 ORTHO05D000494 9.6e-06 55.8 95 27.4
BcaB01g05584 Brassica carinata HOM05D001610 ORTHO05D001585 9.6e-06 55.8 100 33.0
Carub.0006s0752 Capsella rubella HOM05D001610 ORTHO05D001585 9.6e-06 55.8 91 35.2


User provided reference genes

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