Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 2.5e-276 954.9 502 100.0
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 1.2e-195 686.8 523 72.5
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 1.4e-194 683.3 526 72.1
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 5.2e-194 681.4 506 73.7
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 9.9e-193 677.2 504 72.2
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 4.1e-191 671.8 500 72.8
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 9.2e-191 670.6 509 69.7
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 1.1e-188 663.7 485 74.0
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 1.2e-187 660.2 502 71.5
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 1.6e-187 659.8 502 72.1
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 8.1e-187 657.5 516 69.8
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 4.4e-185 651.7 500 72.2
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 2.9e-184 649.0 515 68.9
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 1.4e-183 646.7 515 67.4
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 1.9e-183 646.4 516 67.8
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 1.2e-182 643.7 515 68.0
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 3.5e-182 642.1 511 66.7
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 1.7e-181 639.8 511 68.1
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 1.1e-180 637.1 511 68.7
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 1.5e-180 636.7 486 71.4
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 1.6e-179 633.3 515 67.2
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 6.2e-179 631.3 512 67.2
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.1e-178 630.6 518 66.6
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 1.1e-178 630.6 507 67.1
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 2.0e-177 626.3 454 72.2
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 1.1e-175 620.5 481 70.5
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 2.4e-175 619.4 508 67.1
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 3.2e-175 619.0 527 64.9
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 1.6e-174 616.7 507 65.9
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 2.1e-174 616.3 517 66.5
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 4.6e-174 615.1 507 65.9
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 4.6e-174 615.1 510 65.3
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 4.6e-174 615.1 508 66.7
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 1.3e-173 613.6 519 65.3
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.8e-173 613.2 555 60.4
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 1.1e-172 610.5 508 65.7
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 1.9e-172 609.8 505 67.1
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 1.9e-172 609.8 491 65.2
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 5.6e-172 608.2 486 67.9
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 5.6e-172 608.2 504 65.5
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 5.6e-172 608.2 522 64.2
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 9.6e-172 607.4 513 64.5
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 1.6e-171 606.7 508 66.5
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 6.9e-170 601.3 517 64.6
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 1.2e-169 600.5 456 70.6
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 1.5e-169 600.1 513 63.0
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 4.5e-169 598.6 420 74.0
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 5.8e-169 598.2 509 63.5
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 1.3e-168 597.0 509 63.9
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 1.7e-168 596.7 518 63.9
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 1.4e-167 593.6 412 75.7
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 4.2e-167 592.0 482 65.6
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 1.6e-166 590.1 501 63.1
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 7.9e-166 587.8 516 61.4
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 1.3e-165 587.0 514 60.9
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 3.0e-165 585.9 518 61.4
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 6.7e-165 584.7 518 60.6
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 8.7e-165 584.3 516 60.7
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 8.7e-165 584.3 513 61.6
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 1.1e-164 583.9 536 61.6
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 1.9e-164 583.2 513 66.9
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 1.9e-164 583.2 514 62.5
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 9.6e-164 580.9 507 62.9
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 1.6e-163 580.1 512 62.1
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 2.1e-163 579.7 488 66.0
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 4.8e-163 578.6 435 69.2
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 2.4e-162 576.2 508 61.2
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 1.5e-161 573.5 524 62.0
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 5.8e-161 571.6 456 66.4
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 1.3e-160 570.5 485 66.0
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 8.4e-160 567.8 457 65.2
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 1.1e-159 567.4 347 81.6
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.5e-159 566.2 493 63.9
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 3.2e-159 565.8 465 64.1
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 9.3e-159 564.3 493 63.9
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 3.5e-158 562.4 494 63.4
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 7.9e-158 561.2 493 63.7
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 5.1e-157 558.5 466 64.8
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 2.5e-156 556.2 452 66.6
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 5.7e-156 555.1 526 58.4
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 1.3e-155 553.9 506 62.1
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 2.8e-155 552.7 560 58.4
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 4.5e-153 545.4 458 62.4
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 1.4e-151 540.4 518 57.7
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 1.9e-151 540.0 514 58.0
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 9.7e-148 527.7 467 61.5
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 2.6e-145 519.6 493 59.4
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 2.2e-144 516.5 536 54.3
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 3.2e-143 512.7 411 65.7
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 3.3e-140 502.7 369 71.3
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 5.3e-138 495.4 449 61.5
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 1.4e-135 487.3 512 57.0
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 4.2e-135 485.7 402 61.4
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 5.5e-135 485.3 378 70.4
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 2.0e-129 466.8 421 59.9
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 5.0e-128 462.2 470 54.7
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 5.0e-128 462.2 553 49.2
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 1.2e-126 457.6 457 55.6
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 2.2e-123 446.8 508 50.4
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 5.9e-121 438.7 306 70.6
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 2.7e-118 429.9 381 59.3
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 2.0e-113 413.7 339 61.9
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 1.6e-110 404.1 413 56.4
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 3.6e-110 402.9 436 52.5
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 4.9e-107 392.5 432 50.7
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 1.4e-106 391.0 466 50.0
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 9.5e-103 378.3 271 70.8
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 3.6e-102 376.3 379 52.0
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 6.1e-102 375.6 398 52.8
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.3e-99 367.9 476 47.5
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 8.6e-96 355.1 365 59.2
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 3.3e-95 353.2 243 71.2
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 7.8e-81 305.4 379 46.4
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.1e-74 285.0 332 50.6
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 2.8e-70 270.4 383 43.6
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 9.9e-68 261.9 294 52.7
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 1.1e-63 248.4 461 35.4
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 9.9e-60 235.3 301 47.5
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 4.2e-58 229.9 530 33.0
Cfa005743 Carpinus fangiana HOM05D005856 ORTHO05D007264 4.5e-36 156.8 129 65.9
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 3.6e-33 147.1 188 50.0
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 4.6e-33 146.7 100 73.0
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 1.5e-31 141.7 116 66.4
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 2.5e-26 124.4 181 42.0
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 4.5e-20 103.6 102 51.0
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 5.2e-16 90.1 218 31.7
AL2G26330 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.1e-15 89.0 67 61.2
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.5e-15 88.6 89 51.7
SMO361G0803 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 2.2e-14 84.7 99 46.5
VMungo0464G1347 Vigna mungo HOM05D005856 ORTHO05D007264 2.6e-12 77.8 148 41.9
Cc02_g32220 Coffea canephora HOM05D005856 ORTHO05D007264 1.9e-10 71.6 135 45.9
SalBow4G2969 Salvia bowleyana HOM05D005856 ORTHO05D015634 2.5e-10 71.2 56 58.9
Rhsim10G0039300 Rhododendron simsii HOM05D005856 ORTHO05D007264 5.2e-08 63.5 38 81.6
Migut.O00545 Erythranthe guttata HOM05D005856 ORTHO05D007264 5.7e-07 60.1 130 36.9
Psat5g095160 Pisum sativum HOM05D001167 ORTHO05D036681 2.2e-06 58.2 73 54.8


User provided reference genes

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