Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 2.3e-100 369.0 203 100.0
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 1.8e-76 289.7 205 82.9
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 6.2e-61 238.0 214 67.8
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 5.2e-60 235.0 214 66.8
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 5.2e-60 235.0 214 66.8
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 1.2e-59 233.8 214 66.4
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 2.0e-59 233.0 214 67.8
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 7.6e-59 231.1 215 68.4
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 1.3e-58 230.3 214 67.8
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 4.9e-58 228.4 215 67.0
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 8.4e-58 227.6 210 68.6
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 8.4e-58 227.6 201 68.7
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 8.4e-58 227.6 211 66.4
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 1.4e-57 226.9 214 65.9
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 4.2e-57 225.3 214 65.0
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 9.3e-57 224.2 208 65.4
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 1.2e-56 223.8 211 64.0
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 2.7e-56 222.6 208 66.8
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 3.5e-56 222.2 214 64.5
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 3.5e-56 222.2 214 64.5
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 1.0e-55 220.7 214 64.0
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.0e-55 220.7 214 64.0
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.0e-55 220.7 212 65.1
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 1.7e-55 219.9 214 64.0
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 2.3e-55 219.5 208 65.9
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 2.3e-55 219.5 214 64.0
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 3.0e-55 219.2 216 64.4
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 3.9e-55 218.8 214 64.5
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 5.1e-55 218.4 214 63.6
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 5.1e-55 218.4 207 63.3
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 5.1e-55 218.4 214 62.6
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 6.6e-55 218.0 212 64.2
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 1.5e-54 216.9 183 68.9
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 2.5e-54 216.1 192 67.2
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 3.3e-54 215.7 214 64.0
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 5.6e-54 214.9 209 65.1
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 1.6e-53 213.4 218 64.7
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 2.8e-53 212.6 210 60.5
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 2.8e-53 212.6 202 65.3
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 2.8e-53 212.6 183 67.2
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 3.6e-53 212.2 216 63.0
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 8.1e-53 211.1 211 63.0
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 8.1e-53 211.1 210 63.3
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 1.8e-52 209.9 210 63.3
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 1.8e-52 209.9 212 62.3
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 2.4e-52 209.5 211 63.0
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 3.1e-52 209.1 213 63.4
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 3.1e-52 209.1 217 60.4
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 4.0e-52 208.8 211 62.1
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 4.0e-52 208.8 208 63.0
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 4.0e-52 208.8 216 61.6
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 6.9e-52 208.0 213 65.3
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 1.2e-51 207.2 211 60.7
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 2.6e-51 206.1 200 64.5
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 3.4e-51 205.7 211 59.7
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 4.4e-51 205.3 213 61.0
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 1.3e-50 203.8 211 63.0
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 2.2e-50 203.0 183 66.7
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 3.8e-50 202.2 208 59.1
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 3.8e-50 202.2 211 60.2
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 4.9e-50 201.8 208 61.1
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 1.1e-49 200.7 204 61.3
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 1.9e-49 199.9 200 63.0
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 2.4e-49 199.5 214 62.6
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 3.2e-49 199.1 222 57.7
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 3.2e-49 199.1 210 63.8
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 4.2e-49 198.7 204 61.8
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 5.4e-49 198.4 216 57.9
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 1.2e-48 197.2 212 58.5
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 1.6e-48 196.8 218 58.3
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 1.6e-48 196.8 213 63.4
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 1.6e-48 196.8 209 59.3
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 2.7e-48 196.1 210 58.6
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 2.7e-48 196.1 211 58.3
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 3.5e-48 195.7 210 58.6
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 3.9e-47 192.2 200 60.5
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.9e-47 192.2 200 60.5
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 3.9e-47 192.2 209 57.4
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 6.6e-47 191.4 200 60.5
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 6.6e-47 191.4 214 56.1
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 1.1e-46 190.7 208 61.5
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.1e-46 190.7 200 60.0
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 1.1e-46 190.7 219 59.8
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 1.5e-46 190.3 211 55.9
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.9e-46 189.9 200 59.5
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.9e-46 189.9 200 59.5
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 5.6e-46 188.3 193 62.7
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 5.6e-46 188.3 202 61.4
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 9.6e-46 187.6 205 54.1
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 9.6e-46 187.6 205 54.1
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 2.1e-45 186.4 205 57.1
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 8.1e-45 184.5 211 54.0
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.1e-44 184.1 217 59.4
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 1.1e-44 184.1 208 54.8
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 1.1e-44 184.1 202 60.4
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 1.8e-44 183.3 215 53.5
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 2.4e-44 183.0 207 57.0
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 3.1e-44 182.6 208 53.4
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 6.9e-44 181.4 208 52.9
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 6.9e-44 181.4 208 52.9
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 6.9e-44 181.4 208 52.9
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 9.0e-44 181.0 213 54.0
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 9.0e-44 181.0 213 54.0
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 9.0e-44 181.0 209 56.9
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.5e-43 180.3 207 54.1
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 2.0e-43 179.9 215 57.2
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 2.6e-43 179.5 207 53.6
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 3.4e-43 179.1 207 53.6
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 3.4e-43 179.1 180 63.3
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 3.4e-43 179.1 174 62.6
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 5.8e-43 178.3 207 52.2
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 5.8e-43 178.3 205 57.6
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 5.8e-43 178.3 211 56.4
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 7.6e-43 177.9 213 54.5
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.3e-42 177.2 206 56.8
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 1.7e-42 176.8 212 53.8
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 2.2e-42 176.4 207 53.1
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 2.9e-42 176.0 207 53.1
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 2.9e-42 176.0 204 57.4
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 3.8e-42 175.6 204 55.9
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 4.9e-42 175.3 213 58.2
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 6.4e-42 174.9 198 56.1
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 8.4e-42 174.5 208 56.2
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.4e-41 173.7 211 56.9
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 1.4e-41 173.7 200 52.0
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 1.4e-41 173.7 205 52.7
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 1.9e-41 173.3 207 53.1
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 5.1e-39 165.2 216 53.2
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 1.5e-38 163.7 206 51.0
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 1.5e-35 153.7 190 53.2
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 1.0e-34 151.0 204 50.0
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 1.7e-34 150.2 166 50.6
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 1.9e-33 146.7 121 69.4
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 7.9e-32 141.4 203 47.8
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 1.0e-31 141.0 185 57.8
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 8.7e-31 137.9 213 45.1
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 2.5e-30 136.3 203 45.8
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 2.4e-28 129.8 203 43.3
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 9.0e-28 127.9 183 41.5
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.0e-26 124.4 171 41.5
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 1.3e-26 124.0 193 44.0
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.7e-26 123.6 193 42.0
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 6.1e-24 115.2 162 48.8
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 2.3e-23 113.2 176 45.5
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 1.9e-22 110.2 127 55.1
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 4.8e-21 105.5 151 44.4
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.5e-19 100.5 145 49.7
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 5.0e-18 95.5 133 54.1
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 1.1e-17 94.4 202 38.6
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 4.2e-17 92.4 103 53.4
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 6.7e-15 85.1 205 36.6
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.5e-14 83.2 102 50.0
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.5e-14 83.2 136 44.9
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 4.3e-14 82.4 85 60.0
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 5.7e-14 82.0 136 43.4
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.7e-13 80.5 175 40.0
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 3.7e-13 79.3 138 40.6
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 8.2e-13 78.2 124 40.3
Solyc10g077120.3 Solanum lycopersicum HOM05D004549 ORTHO05D005390 2.4e-12 76.6 76 57.9


User provided reference genes

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