Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 3.5e-86 321.6 169 100.0
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 5.1e-77 291.2 159 93.7
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 5.1e-77 291.2 159 93.7
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 3.3e-76 288.5 159 93.1
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 7.7e-73 277.3 159 88.1
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.1e-71 273.5 159 86.8
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 2.1e-70 269.2 159 86.2
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 2.1e-70 269.2 159 86.2
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 2.1e-70 269.2 159 86.2
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 2.1e-70 269.2 159 86.2
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 2.3e-69 265.8 159 84.9
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 3.9e-69 265.0 159 84.9
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 6.7e-69 264.2 162 82.7
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 6.7e-69 264.2 159 83.6
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 8.8e-69 263.8 159 84.3
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 2.6e-68 262.3 159 84.3
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.7e-68 260.4 159 83.6
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.7e-68 260.4 159 83.6
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.7e-68 260.4 159 83.6
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 4.8e-67 258.1 159 83.6
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 5.3e-66 254.6 159 82.4
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 5.3e-66 254.6 159 81.8
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 7.0e-66 254.2 161 82.6
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 7.7e-65 250.8 159 81.1
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 5.0e-64 248.1 159 79.9
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 8.5e-64 247.3 160 80.6
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 6.1e-62 241.1 149 82.6
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 5.2e-61 238.0 159 78.6
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 2.6e-60 235.7 162 78.4
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 2.6e-60 235.7 162 78.4
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.7e-60 234.6 159 77.4
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 5.7e-60 234.6 162 76.5
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 1.3e-59 233.4 159 76.7
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 1.3e-59 233.4 159 76.7
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 1.3e-59 233.4 159 76.7
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 1.3e-59 233.4 159 76.7
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 1.3e-59 233.4 159 77.4
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.7e-59 233.0 159 78.0
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 4.8e-59 231.5 159 76.1
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 4.8e-59 231.5 159 76.1
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 8.2e-59 230.7 159 76.7
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 5.3e-58 228.0 148 78.4
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.0e-58 227.6 159 76.1
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 4.5e-57 224.9 159 73.6
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.9e-56 222.2 159 73.0
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 2.9e-56 222.2 161 73.3
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 1.1e-55 220.3 159 73.6
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 1.1e-55 220.3 159 73.6
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 1.1e-55 220.3 159 73.6
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 1.9e-55 219.5 159 74.2
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 2.1e-54 216.1 159 72.3
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 5.7e-52 208.0 149 72.5
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 2.8e-51 205.7 160 72.5
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 5.9e-49 198.0 119 86.6
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 1.1e-47 193.7 143 74.1
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.9e-47 193.0 217 53.9
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.7e-46 189.1 118 83.9
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 3.6e-46 188.7 159 65.4
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 5.2e-45 184.9 117 82.1
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 8.3e-43 177.6 134 70.9
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 8.3e-43 177.6 149 67.8
BraSC48t46330Z Brassica rapa HOM05D001987 ORTHO05D006514 5.0e-40 168.3 111 80.2
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-40 168.3 114 78.9
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 6.6e-40 167.9 123 74.0
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.5e-39 166.8 158 57.6
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.5e-39 166.8 158 57.6
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.5e-39 166.8 158 57.6
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.5e-39 166.8 158 57.6
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.5e-39 166.8 158 57.6
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 7.2e-39 164.5 158 58.9
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 1.6e-38 163.3 158 57.6
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 2.1e-38 162.9 158 57.0
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.3e-37 159.5 149 61.1
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 7.0e-34 147.9 127 66.1
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 8.6e-32 141.0 107 75.7
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 5.6e-31 138.3 104 71.2
Nitab4.5_0000309g0190 Nicotiana tabacum HOM05D001987 ORTHO05D006514 4.9e-27 125.2 104 69.2
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 2.3e-24 116.3 96 66.7
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 6.6e-24 114.8 63 85.7
TPR.G21771 Trifolium pratense HOM05D001987 ORTHO05D006514 2.9e-19 99.4 101 57.4
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 6.6e-16 88.2 48 85.4
EL10Ac1g01304 Beta vulgaris HOM05D001987 ORTHO05D006514 5.2e-13 78.6 47 78.7
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.7e-11 72.4 159 33.3
Solyc05g045824.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.2e-10 69.3 70 55.7
Nitab4.5_0000334g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 2.7e-09 66.2 34 88.2
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 2.7e-09 66.2 42 76.2
Solyc12g035820.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.8e-09 64.7 149 30.9
Lalb_Chr19g0127771 Lupinus albus HOM05D001987 ORTHO05D006514 9.5e-07 57.8 34 82.4
Nitab4.5_0011784g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 2.8e-06 56.2 29 86.2


User provided reference genes

Program Settings