Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0065911 Lupinus albus HOM05D005358 ORTHO05D006384 4.8e-149 531.2 274 100.0
Lj1g0002097 Lotus japonicus HOM05D005358 ORTHO05D006384 4.8e-133 478.0 274 89.4
Medtr3g088040 Medicago truncatula HOM05D005358 ORTHO05D006384 4.4e-126 454.9 274 85.0
Psat5g087360 Pisum sativum HOM05D005358 ORTHO05D006384 1.7e-125 453.0 274 85.8
arahy.Tifrunner.gnm1.ann1.L9FPHH Arachis hypogaea HOM05D005358 ORTHO05D006384 2.2e-125 452.6 275 85.1
TPR.G21057 Trifolium pratense HOM05D005358 ORTHO05D006384 3.4e-123 445.3 274 83.6
Glyma.04G249700 Glycine max HOM05D005358 ORTHO05D006384 2.1e-120 436.0 276 84.4
arahy.Tifrunner.gnm1.ann1.QP7RRL Arachis hypogaea HOM05D005358 ORTHO05D006384 2.7e-120 435.6 275 83.6
CiPaw.05G221300 Carya illinoinensis HOM05D005358 ORTHO05D006384 3.0e-119 432.2 276 83.7
Glyma.06G113200 Glycine max HOM05D005358 ORTHO05D006384 5.2e-119 431.4 276 84.1
Sabra02G0065500 Salix brachista HOM05D005358 ORTHO05D006384 1.8e-116 422.9 276 81.2
VMungo1309G1077 Vigna mungo HOM05D005358 ORTHO05D006384 2.4e-116 422.5 275 81.8
Cfa016019 Carpinus fangiana HOM05D005358 ORTHO05D006384 5.9e-115 417.9 277 80.5
Potri.002G083500 Populus trichocarpa HOM05D005358 ORTHO05D006384 1.0e-114 417.2 277 80.9
QL09p034583 Quercus lobata HOM05D005358 ORTHO05D006384 1.7e-114 416.4 271 81.9
Prupe.1G497100 Prunus persica HOM05D005358 ORTHO05D006384 2.2e-114 416.0 279 81.0
Duzib093G1131 Durio zibethinus HOM05D005358 ORTHO05D006384 2.9e-114 415.6 279 79.2
Gohir.A05G235100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 1.1e-113 413.7 277 79.1
Gohir.D05G237400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 1.5e-113 413.3 276 79.0
Gorai.009G245800 Gossypium raimondii HOM05D005358 ORTHO05D006384 1.9e-113 412.9 276 79.0
MD15G1348200 Malus domestica HOM05D005358 ORTHO05D006384 1.9e-113 412.9 276 80.1
Duzib116G0356 Durio zibethinus HOM05D005358 ORTHO05D006384 3.2e-113 412.1 278 78.4
MELO3C010608.2 Cucumis melo HOM05D005358 ORTHO05D006384 4.2e-113 411.8 273 77.7
Gohir.A01G189100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 5.5e-113 411.4 278 78.4
CsaV3_6G034480 Cucumis sativus L. HOM05D005358 ORTHO05D006384 7.2e-113 411.0 276 77.2
Sed0008649 Sechium edule HOM05D005358 ORTHO05D006384 9.4e-113 410.6 275 77.5
Ciclev10002099m.g Citrus clementina HOM05D005358 ORTHO05D006384 1.2e-112 410.2 283 77.4
COL.COLO4_08077 Corchorus olitorius HOM05D005358 ORTHO05D006384 1.6e-112 409.8 280 78.2
MD08G1162600 Malus domestica HOM05D005358 ORTHO05D006384 3.6e-112 408.7 278 78.4
Gohir.D01G180400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 4.7e-112 408.3 278 78.1
Gorai.002G222200 Gossypium raimondii HOM05D005358 ORTHO05D006384 4.7e-112 408.3 278 78.1
GSVIVG01008866001 Vitis vinifera HOM05D005358 ORTHO05D006384 4.7e-112 408.3 276 77.5
Nn5g28290 Nelumbo nucifera HOM05D005358 ORTHO05D006384 8.0e-112 407.5 274 77.4
FAN20G2528 Fragaria x ananassa HOM05D005358 ORTHO05D006384 1.4e-111 406.8 278 78.1
CANSAT25G3496 Cannabis sativa HOM05D005358 ORTHO05D006384 2.3e-111 406.0 276 78.6
CiPaw.06G031000 Carya illinoinensis HOM05D005358 ORTHO05D006384 3.0e-111 405.6 271 80.1
Phvul.009G125100 Phaseolus vulgaris HOM05D005358 ORTHO05D006384 3.0e-111 405.6 277 80.1
FAN27G1910 Fragaria x ananassa HOM05D005358 ORTHO05D006384 4.0e-111 405.2 278 78.4
FAN15G1035 Fragaria x ananassa HOM05D005358 ORTHO05D006384 6.7e-111 404.4 278 77.7
PGR042G4000 Punica granatum HOM05D005358 ORTHO05D006384 6.7e-111 404.4 280 76.8
ClCG08G005640 Citrullus lanatus HOM05D005358 ORTHO05D006384 8.8e-111 404.1 273 76.2
Sabra05G0134400 Salix brachista HOM05D005358 ORTHO05D006384 8.8e-111 404.1 275 78.5
RcHm_v2.0_Chr6g0295831 Rosa chinensis HOM05D005358 ORTHO05D006384 1.2e-110 403.7 278 78.8
TWI34G1827 Tripterygium wilfordii HOM05D005358 ORTHO05D006384 2.6e-110 402.5 277 78.3
FAN24G1660 Fragaria x ananassa HOM05D005358 ORTHO05D006384 4.4e-110 401.7 278 77.0
MBI16_g07664_MAGBIO Magnolia biondii HOM05D005358 ORTHO05D006384 5.7e-110 401.4 274 78.1
DCAR_003551 Daucus carota HOM05D005358 ORTHO05D006384 9.7e-110 400.6 277 78.0
CSS0043679 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 1.7e-109 399.8 275 78.5
TAR628G0971 Trochodendron aralioides HOM05D005358 ORTHO05D006384 4.8e-109 398.3 279 77.4
PSO528G0145 Papaver somniferum HOM05D005358 ORTHO05D006384 5.3e-108 394.8 276 76.4
Atru.chr13.1462 Acer truncatum HOM05D005358 ORTHO05D006384 9.1e-108 394.0 276 75.7
Atru.chr13.1484 Acer truncatum HOM05D005358 ORTHO05D006384 9.1e-108 394.0 276 75.7
Thecc.08G125500 Theobroma cacao HOM05D005358 ORTHO05D006384 1.6e-107 393.3 277 75.8
Sc01g0006700 Simmondsia chinensis HOM05D005358 ORTHO05D006384 3.5e-107 392.1 275 74.5
CSS0029272 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 5.9e-107 391.3 275 76.7
CSS0039743 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 5.9e-107 391.3 275 76.7
Dinv07219 Davidia involucrata HOM05D005358 ORTHO05D006384 7.7e-107 391.0 274 77.0
Lsat_1_v5_gn_6_35480 Lactuca sativa HOM05D005358 ORTHO05D006384 7.7e-107 391.0 276 77.5
Cc10_g11890 Coffea canephora HOM05D005358 ORTHO05D006384 1.7e-106 389.8 277 74.0
Eucgr.F03789 Eucalyptus grandis HOM05D005358 ORTHO05D006384 2.9e-106 389.0 275 77.1
Actinidia03469 Actinidia chinensis HOM05D005358 ORTHO05D006384 4.2e-105 385.2 275 76.0
Oeu028563.1 Olea europaea HOM05D005358 ORTHO05D006384 1.6e-104 383.3 276 74.3
Cpa.g.sc64.88 Carica papaya HOM05D005358 ORTHO05D006384 2.7e-104 382.5 278 74.1
HanXRQChr02g0053161 Helianthus annuus HOM05D005358 ORTHO05D006384 3.6e-104 382.1 280 77.1
CDE02G0325 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 1.0e-103 380.6 274 74.5
ATR0584G037 Amborella trichopoda HOM05D005358 ORTHO05D006384 1.8e-103 379.8 275 76.0
PSO170G3857 Papaver somniferum HOM05D005358 ORTHO05D006384 3.0e-103 379.0 276 74.3
HPP92_025043 Vanilla planifolia HOM05D005358 ORTHO05D006384 3.0e-103 379.0 274 74.8
Nitab4.5_0000322g0160 Nicotiana tabacum HOM05D005358 ORTHO05D006384 4.0e-103 378.6 282 72.7
HanXRQChr02g0053151 Helianthus annuus HOM05D005358 ORTHO05D006384 8.8e-103 377.5 279 75.3
TAR376G0195 Trochodendron aralioides HOM05D005358 ORTHO05D006384 1.5e-102 376.7 274 74.5
Hund26809 Selenicereus undatus HOM05D005358 ORTHO05D006384 2.6e-102 375.9 278 73.0
FvH4_2g26970 Fragaria vesca HOM05D005358 ORTHO05D006384 3.4e-102 375.6 236 80.9
vmacro12532 Vaccinium macrocarpon HOM05D005358 ORTHO05D006384 4.4e-102 375.2 275 74.9
Lj7A340T34 Lonicera japonica HOM05D005358 ORTHO05D006384 5.7e-102 374.8 272 73.2
Lju12250A0T27 Lonicera japonica HOM05D005358 ORTHO05D006384 5.7e-102 374.8 272 73.2
ECA233G3168 Erigeron canadensis HOM05D005358 ORTHO05D006384 1.3e-101 373.6 262 79.0
Rhsim06G0103300 Rhododendron simsii HOM05D005358 ORTHO05D006384 1.3e-101 373.6 275 74.5
PGSC0003DMG400017556 Solanum tuberosum HOM05D005358 ORTHO05D006384 1.3e-101 373.6 283 71.7
Solyc06g060340.3 Solanum lycopersicum HOM05D005358 ORTHO05D006384 1.7e-101 373.2 283 72.1
THA.LOC104817350 Tarenaya hassleriana HOM05D005358 ORTHO05D006384 1.7e-101 373.2 278 71.9
Oeu059439.1 Olea europaea HOM05D005358 ORTHO05D006384 2.8e-101 372.5 276 73.2
Sopen06g020470 Solanum pennellii HOM05D005358 ORTHO05D006384 3.7e-101 372.1 283 71.7
Carub.0001s3521 Capsella rubella HOM05D005358 ORTHO05D006384 6.3e-101 371.3 273 72.5
SGA_v2.0_scaffold25G11130 Striga asiatica HOM05D005358 ORTHO05D006384 6.3e-101 371.3 237 80.6
BcaB04g17587 Brassica carinata HOM05D005358 ORTHO05D006384 1.4e-100 370.2 275 72.0
Migut.C01123 Erythranthe guttata HOM05D005358 ORTHO05D006384 1.4e-100 370.2 278 73.0
SalBow6G1113 Salvia bowleyana HOM05D005358 ORTHO05D006384 1.4e-100 370.2 260 76.2
Aa31LG6G9330 Aethionema arabicum HOM05D005358 ORTHO05D006384 1.8e-100 369.8 277 71.8
MSTRG.22407 Avicennia marina HOM05D005358 ORTHO05D006384 1.8e-100 369.8 276 72.8
CARHR035950 Cardamine hirsuta HOM05D005358 ORTHO05D006384 1.8e-100 369.8 273 71.8
BcaC07g37296 Brassica carinata HOM05D005358 ORTHO05D006384 2.4e-100 369.4 275 72.0
A08p06370 Brassica napus HOM05D005358 ORTHO05D006384 2.4e-100 369.4 275 72.0
BolC8t47572H Brassica oleracea HOM05D005358 ORTHO05D006384 2.4e-100 369.4 275 72.0
BraA08t32644Z Brassica rapa HOM05D005358 ORTHO05D006384 2.4e-100 369.4 275 72.0
Aqoxy6G00218 Aquilegia oxysepala HOM05D005358 ORTHO05D006384 3.1e-100 369.0 279 72.8
BcaB07g33947 Brassica carinata HOM05D005358 ORTHO05D006384 3.1e-100 369.0 273 71.8
AT1G44575 Arabidopsis thaliana HOM05D005358 ORTHO05D006384 5.4e-100 368.2 273 71.4
BcaC08g42851 Brassica carinata HOM05D005358 ORTHO05D006384 5.4e-100 368.2 273 71.4
A10p07510 Brassica napus HOM05D005358 ORTHO05D006384 5.4e-100 368.2 273 71.4
C06p00660 Brassica napus HOM05D005358 ORTHO05D006384 5.4e-100 368.2 273 71.4
BolC6t35202H Brassica oleracea HOM05D005358 ORTHO05D006384 5.4e-100 368.2 273 71.4
BraSC36t46054Z Brassica rapa HOM05D005358 ORTHO05D006384 5.4e-100 368.2 273 71.4
C08p07310 Brassica napus HOM05D005358 ORTHO05D006384 1.2e-99 367.1 275 71.6
Migut.N03279 Erythranthe guttata HOM05D005358 ORTHO05D006384 1.6e-99 366.7 275 72.7
Thhalv10011718m.g Eutrema salsugineum HOM05D005358 ORTHO05D006384 2.7e-99 365.9 274 71.5
Os01g0869800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 3.5e-99 365.5 220 82.7
Sp1g33560 Schrenkiella parvula HOM05D005358 ORTHO05D006384 3.5e-99 365.5 273 70.7
SEGI_26351 Sequoiadendron giganteum HOM05D005358 ORTHO05D006384 3.5e-99 365.5 292 72.6
CAN.G1040.10 Capsicum annuum HOM05D005358 ORTHO05D006384 1.0e-98 364.0 282 70.6
AL1G52370 Arabidopsis lyrata HOM05D005358 ORTHO05D006384 2.9e-98 362.5 268 71.6
AUR62019079 Chenopodium quinoa HOM05D005358 ORTHO05D006384 3.2e-97 359.0 200 89.0
Nitab4.5_0004044g0020 Nicotiana tabacum HOM05D005358 ORTHO05D006384 1.2e-96 357.1 206 86.4
unitig_46.g18102 Utricularia gibba HOM05D005358 ORTHO05D006384 2.1e-96 356.3 214 83.6
Os04g0690800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 6.1e-96 354.8 275 69.1
Peaxi162Scf00051g00910 Petunia axillaris HOM05D005358 ORTHO05D006384 4.1e-92 342.0 195 85.6
Zm00001eb146510 Zea mays HOM05D005358 ORTHO05D006384 7.0e-92 341.3 195 86.2
Pp3c20_23430 Physcomitrium patens HOM05D005358 ORTHO05D006384 2.1e-88 329.7 252 67.5
SMO146G0179 Selaginella moellendorffii HOM05D005358 ORTHO05D006384 1.2e-83 313.9 198 77.8
Mapoly0013s0199 Marchantia polymorpha HOM05D005358 ORTHO05D006384 3.0e-82 309.3 283 59.4
Ca_16558_v3 Cicer arietinum L. HOM05D005358 ORTHO05D006384 1.5e-81 307.0 198 80.8
CDE08G0239 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 1.9e-81 306.6 240 71.2
AagrBONN_evm.TU.Sc2ySwM_368.1869 Anthoceros agrestis HOM05D005358 ORTHO05D006384 2.5e-81 306.2 233 67.0
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 4.4e-78 295.4 171 86.0
Manes.18G077312 Manihot esculenta HOM05D005358 ORTHO05D006384 3.9e-74 282.3 194 76.8
Dinv27311 Davidia involucrata HOM05D005358 ORTHO05D006384 2.5e-65 253.1 200 73.5
Haze_00439 Corylus avellana HOM05D005358 ORTHO05D006384 3.3e-65 252.7 164 79.9
Ah.05g171100 Amaranthus hybridus HOM05D005358 ORTHO05D006384 1.5e-62 243.8 135 90.4
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 2.2e-61 240.0 162 71.0
EL10Ac1g01011 Beta vulgaris HOM05D005358 ORTHO05D006384 1.4e-60 237.3 274 54.4
CBR_g40031 Chara braunii HOM05D005358 ORTHO05D006384 3.3e-57 226.1 166 65.7
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 1.7e-50 203.8 233 56.2
CDE06G0290 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 1.9e-41 173.7 122 73.8
Actinidia29466 Actinidia chinensis HOM05D005358 ORTHO05D006384 3.3e-41 172.9 155 67.1
EL10Ac5g12375 Beta vulgaris HOM05D005358 ORTHO05D006384 2.6e-38 163.3 97 83.5
Cre01.g016600 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 3.8e-37 159.5 234 43.6
Cre01.g016750 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 4.9e-37 159.1 234 43.6
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 5.3e-23 112.5 113 60.2
FAN08G1189 Fragaria x ananassa HOM05D005358 ORTHO05D006384 2.2e-21 107.1 82 72.0
PRCOL_00001561 Prasinoderma coloniale HOM05D005358 ORTHO05D006384 5.0e-13 79.3 183 33.3
Cre03.g146147 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 1.8e-10 70.9 179 33.0
MELO3C030542.2 Cucumis melo HOM05D005358 ORTHO05D006384 4.4e-09 66.2 38 81.6
MELO3C031367.2 Cucumis melo HOM05D005358 ORTHO05D006384 1.7e-08 64.3 38 84.2
MCO14G314 Micromonas commoda HOM05D005358 ORTHO05D006384 5.3e-07 59.3 60 48.3


User provided reference genes

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