Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 8.9e-139 496.9 244 100.0
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 6.8e-123 444.1 244 87.7
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 2.6e-122 442.2 244 86.5
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 4.4e-122 441.4 244 86.9
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 7.6e-122 440.7 244 86.9
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 2.9e-121 438.7 244 86.5
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 1.9e-120 436.0 244 86.9
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 9.2e-120 433.7 245 84.9
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 1.9e-117 426.0 245 84.1
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 2.8e-116 422.2 244 82.8
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 7.6e-114 414.1 244 82.4
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 6.4e-113 411.0 244 80.3
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 4.2e-112 408.3 244 79.9
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.2e-112 408.3 244 79.9
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.4e-112 407.9 244 80.7
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 3.5e-111 405.2 244 78.7
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.0e-110 403.7 244 78.7
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 1.3e-110 403.3 242 77.7
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 3.0e-110 402.1 244 77.5
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 6.6e-110 401.0 244 76.6
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 6.6e-110 401.0 244 78.3
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 6.6e-110 401.0 244 78.3
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 8.7e-110 400.6 244 76.6
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 1.5e-109 399.8 244 78.7
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 1.5e-109 399.8 244 79.5
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.9e-109 399.4 244 78.3
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 3.3e-109 398.7 244 77.5
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.3e-109 398.7 244 77.9
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 3.3e-109 398.7 244 78.3
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 3.6e-108 395.2 244 80.7
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 6.2e-108 394.4 242 76.0
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 1.1e-107 393.7 242 76.4
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 1.4e-107 393.3 245 75.5
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 1.8e-107 392.9 244 77.9
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 2.4e-107 392.5 244 77.5
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 3.1e-107 392.1 244 76.6
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 3.1e-107 392.1 244 76.2
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 6.9e-107 391.0 242 76.9
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 6.9e-107 391.0 244 76.6
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 1.2e-106 390.2 244 77.5
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 2.6e-106 389.0 246 75.2
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.5e-106 388.3 244 75.8
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 9.9e-106 387.1 244 75.4
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 1.3e-105 386.7 260 71.5
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 8.4e-105 384.0 244 73.0
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 8.4e-105 384.0 244 74.2
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 1.1e-104 383.6 244 75.0
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 1.1e-104 383.6 244 74.6
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 2.4e-104 382.5 244 73.0
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 3.2e-104 382.1 244 75.8
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 4.2e-104 381.7 230 78.3
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 5.4e-104 381.3 244 74.6
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 5.4e-104 381.3 245 74.7
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 9.3e-104 380.6 244 75.8
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.2e-103 380.2 242 76.4
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 2.1e-103 379.4 242 74.0
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 1.8e-102 376.3 242 72.3
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.3e-102 375.9 245 74.3
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 3.0e-102 375.6 244 72.5
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 3.0e-102 375.6 244 72.1
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 3.9e-102 375.2 245 74.3
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 3.9e-102 375.2 276 67.4
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 6.7e-102 374.4 244 72.1
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 6.7e-102 374.4 244 72.1
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 1.1e-101 373.6 275 66.9
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 1.9e-101 372.9 244 70.9
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 1.9e-101 372.9 285 65.3
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 4.3e-101 371.7 244 71.7
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 5.6e-101 371.3 244 70.5
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 7.4e-101 370.9 245 73.5
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 1.6e-100 369.8 246 73.2
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 1.6e-100 369.8 244 70.9
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 2.8e-100 369.0 296 62.5
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 4.8e-100 368.2 231 74.5
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 6.2e-100 367.9 244 70.1
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 1.1e-99 367.1 246 72.4
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.1e-99 367.1 245 71.4
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 1.1e-99 367.1 229 75.1
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 1.4e-99 366.7 242 69.8
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 1.4e-99 366.7 229 76.9
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 2.4e-99 365.9 245 71.0
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 3.1e-99 365.5 244 70.1
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 4.0e-99 365.2 254 70.9
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 1.2e-98 363.6 244 69.7
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 2.9e-97 359.0 244 67.6
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 1.4e-96 356.7 244 70.9
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 2.4e-96 355.9 244 67.6
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.8e-94 349.7 241 70.5
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 2.3e-94 349.4 328 57.0
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 7.4e-93 344.4 214 75.7
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 1.6e-92 343.2 247 68.4
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 4.5e-90 335.1 210 75.2
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 5.8e-90 334.7 205 79.5
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 4.6e-87 325.1 205 76.1
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 7.9e-87 324.3 209 74.2
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 3.9e-86 322.0 281 57.3
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 8.5e-81 304.3 250 57.2
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 8.8e-78 294.3 244 60.2
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 4.3e-77 292.0 248 54.0
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 7.4e-77 291.2 214 69.2
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.8e-76 288.5 301 53.8
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 6.3e-76 288.1 244 61.1
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 9.7e-69 264.2 314 44.3
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 3.6e-63 245.7 249 52.2
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 9.7e-61 237.7 260 46.5
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.3e-57 227.3 251 48.2
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 5.2e-54 215.3 252 47.2
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.3e-52 210.7 147 72.1
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 1.3e-52 210.7 255 42.4
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 1.6e-50 203.8 340 40.6
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.6e-47 193.7 126 77.0
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 4.4e-45 185.7 110 74.5
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 3.0e-38 162.9 123 63.4
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 6.3e-36 155.2 97 79.4
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.3e-33 146.7 83 77.1
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.2e-27 126.3 83 75.9
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.2e-27 126.3 83 75.9
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.0e-25 119.8 75 80.0
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 5.2e-22 109.0 59 81.4
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 1.4e-19 100.9 69 72.5
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 7.8e-18 95.1 94 53.2
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 1.7e-12 77.4 122 42.6
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 4.1e-11 72.8 50 66.0
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 2.1e-10 70.5 50 64.0
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 2.1e-10 70.5 50 64.0
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 3.0e-09 66.6 73 43.8
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 8.6e-09 65.1 37 78.4
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 1.2e-07 61.2 76 46.1
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 1.6e-07 60.8 42 64.3
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 1.6e-07 60.8 95 38.9
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 8.1e-07 58.5 65 44.6
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.4e-06 57.0 84 38.1
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 4.0e-06 56.2 87 35.6
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 4.0e-06 56.2 58 50.0
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 5.2e-06 55.8 77 41.6
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 6.8e-06 55.5 75 41.3
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 6.8e-06 55.5 56 42.9
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 6.8e-06 55.5 81 38.3
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 6.8e-06 55.5 58 50.0
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 8.9e-06 55.1 69 42.0
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 8.9e-06 55.1 73 39.7


User provided reference genes

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