Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0405651 Lupinus albus HOM05D004291 ORTHO05D005620 2.9e-151 538.5 267 100.0
Lalb_Chr00c24g0407111 Lupinus albus HOM05D004291 ORTHO05D005620 2.9e-151 538.5 267 100.0
Psat3g172200 Pisum sativum HOM05D004291 ORTHO05D005620 1.3e-143 513.1 260 97.3
LjContig00315g0005528 Lotus japonicus HOM05D004291 ORTHO05D005620 2.5e-142 508.8 255 97.3
Lj5g0026615 Lotus japonicus HOM05D004291 ORTHO05D005620 2.7e-141 505.4 252 97.6
RcHm_v2.0_MTg0498571 Rosa chinensis HOM05D004291 ORTHO05D005620 4.7e-141 504.6 257 96.5
arahy.Tifrunner.gnm1.ann1.4JQ3QL Arachis hypogaea HOM05D004291 ORTHO05D005620 1.3e-138 496.5 250 97.6
arahy.Tifrunner.gnm1.ann1.8KX3ZR Arachis hypogaea HOM05D004291 ORTHO05D005620 1.3e-138 496.5 250 97.6
arahy.Tifrunner.gnm1.ann1.C5IA5B Arachis hypogaea HOM05D004291 ORTHO05D005620 1.3e-138 496.5 250 97.6
arahy.Tifrunner.gnm1.ann1.E3XYYX Arachis hypogaea HOM05D004291 ORTHO05D005620 1.3e-138 496.5 250 97.6
arahy.Tifrunner.gnm1.ann1.K8XT55 Arachis hypogaea HOM05D004291 ORTHO05D005620 1.3e-138 496.5 250 97.6
arahy.Tifrunner.gnm1.ann1.I3FVC7 Arachis hypogaea HOM05D004291 ORTHO05D005620 4.8e-138 494.6 248 97.6
TPR.G581 Trifolium pratense HOM05D004291 ORTHO05D005620 7.7e-136 487.3 245 96.7
Ca_03780_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 2.2e-135 485.7 244 96.7
Ca_31296_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 3.8e-135 485.0 250 95.2
CsaV3_5G015800 Cucumis sativus L. HOM05D004291 ORTHO05D005620 8.5e-135 483.8 257 93.0
ATMG00160 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.6e-133 478.4 257 93.0
CARHR282690 Cardamine hirsuta HOM05D004291 ORTHO05D005620 1.0e-132 476.9 257 92.6
arahy.Tifrunner.gnm1.ann1.81GM5H Arachis hypogaea HOM05D004291 ORTHO05D005620 4.0e-132 474.9 239 97.5
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 4.0e-132 474.9 239 97.5
CANSAT16G0053 Cannabis sativa HOM05D004291 ORTHO05D005620 2.6e-131 472.2 257 92.6
arahy.Tifrunner.gnm1.ann1.5E6QYU Arachis hypogaea HOM05D004291 ORTHO05D005620 3.4e-131 471.9 237 97.5
arahy.Tifrunner.gnm1.ann1.JQU8UC Arachis hypogaea HOM05D004291 ORTHO05D005620 3.4e-131 471.9 237 97.5
LjContig00315g0005262 Lotus japonicus HOM05D004291 ORTHO05D005620 1.3e-130 469.9 255 91.8
arahy.Tifrunner.gnm1.ann1.NTK3LG Arachis hypogaea HOM05D004291 ORTHO05D005620 6.3e-130 467.6 237 97.0
DCAR_032452 Daucus carota HOM05D004291 ORTHO05D005620 5.4e-129 464.5 254 92.5
Nn1g09987 Nelumbo nucifera HOM05D004291 ORTHO05D005620 5.4e-129 464.5 257 91.4
Thhalv10023011m.g Eutrema salsugineum HOM05D004291 ORTHO05D005620 3.5e-128 461.8 257 89.9
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 1.6e-125 453.0 237 93.7
Gorai.001G161700 Gossypium raimondii HOM05D004291 ORTHO05D005620 8.0e-125 450.7 229 96.1
Medtr0212s0040 Medicago truncatula HOM05D000743 ORTHO05D000580 1.3e-122 443.4 253 90.5
Sed0009617 Sechium edule HOM05D004291 ORTHO05D005620 1.7e-122 443.0 229 94.3
BraSC48t46334Z Brassica rapa HOM05D004291 ORTHO05D005620 3.8e-119 431.8 258 84.9
A04p09440 Brassica napus HOM05D004291 ORTHO05D005620 1.1e-118 430.3 229 92.1
A04p09530 Brassica napus HOM05D004291 ORTHO05D005620 1.1e-118 430.3 229 92.1
BolSC28t60319H Brassica oleracea HOM05D004291 ORTHO05D005620 1.1e-118 430.3 229 92.1
BolSC28t60374H Brassica oleracea HOM05D004291 ORTHO05D005620 1.1e-118 430.3 229 92.1
BraSC54t46371Z Brassica rapa HOM05D004291 ORTHO05D005620 1.1e-118 430.3 229 92.1
BraSC54t46353Z Brassica rapa HOM05D004291 ORTHO05D005620 5.5e-118 427.9 228 92.1
BraSC48t46243Z Brassica rapa HOM05D004291 ORTHO05D005620 9.5e-118 427.2 230 92.2
Glyma.09G040100 Glycine max HOM05D004291 ORTHO05D005620 2.1e-117 426.0 253 82.6
Cfa021332 Carpinus fangiana HOM05D004291 ORTHO05D005620 2.6e-115 419.1 217 94.9
SGA_v2.0_scaffold245G44781 Striga asiatica HOM05D004291 ORTHO05D005620 4.4e-115 418.3 228 91.2
Sed0021216 Sechium edule HOM05D004291 ORTHO05D005620 2.4e-113 412.5 257 83.3
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 9.2e-113 410.6 281 76.9
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 3.5e-112 408.7 277 76.5
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 3.5e-112 408.7 277 76.5
HanXRQMTg0579681 Helianthus annuus HOM05D004291 ORTHO05D005620 3.5e-112 408.7 282 75.9
VMungo1309G0827 Vigna mungo HOM05D004291 ORTHO05D005620 2.9e-111 405.6 252 79.4
Phvul.009G252600 Phaseolus vulgaris HOM05D004291 ORTHO05D005620 1.1e-110 403.7 243 80.7
Potri.007G061781 Populus trichocarpa HOM05D004291 ORTHO05D005620 1.3e-103 380.2 215 87.9
BraSC54t46377Z Brassica rapa HOM05D004291 ORTHO05D005620 1.1e-100 370.5 200 91.5
SabraMtG0008700 Salix brachista HOM05D004291 ORTHO05D005620 1.1e-100 370.5 206 88.8
Eucgr.I01856 Eucalyptus grandis HOM05D004291 ORTHO05D005620 1.4e-100 370.2 192 95.8
GSVIVG01006909001 Vitis vinifera HOM05D004291 ORTHO05D005620 6.4e-98 361.3 202 90.1
RcHm_v2.0_MTg0498241 Rosa chinensis HOM05D004291 ORTHO05D005620 1.1e-97 360.5 189 94.7
Migut.J01259 Erythranthe guttata HOM05D004291 ORTHO05D005620 5.2e-92 341.7 181 92.8
Hma1.2p1_0716F.1_g208050 Hydrangea macrophylla HOM05D004291 ORTHO05D005620 3.0e-87 325.9 170 95.3
AL8G12400 Arabidopsis lyrata HOM05D004291 ORTHO05D005620 2.8e-77 292.7 160 90.6
Psat1g132320 Pisum sativum HOM05D004291 ORTHO05D007972 5.8e-75 285.0 175 80.0
Nn1g09999 Nelumbo nucifera HOM05D004291 ORTHO05D005620 4.3e-70 268.9 186 78.0
Nn1g10072 Nelumbo nucifera HOM05D004291 ORTHO05D005620 4.3e-70 268.9 186 78.0
CAN.G1173.2 Capsicum annuum HOM05D004291 ORTHO05D005620 8.1e-69 264.6 153 88.9
Sed0022989 Sechium edule HOM05D004291 ORTHO05D005620 1.9e-65 253.4 127 94.5
Dinv06711 Davidia involucrata HOM05D004291 ORTHO05D005620 1.3e-63 247.3 189 69.8
AUR62042349 Chenopodium quinoa HOM05D004291 ORTHO05D005620 5.6e-62 241.9 124 95.2
AUR62001626 Chenopodium quinoa HOM05D004291 ORTHO05D005620 8.1e-61 238.0 124 93.5
Solyc00g500310.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 8.1e-61 238.0 124 92.7
Solyc00g500101.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.4e-60 237.3 124 92.7
Solyc00g500118.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.4e-60 237.3 124 92.7
Solyc00g500244.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.4e-60 237.3 124 92.7
Solyc00g500275.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.4e-60 237.3 124 92.7
Solyc00g500359.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.4e-60 237.3 124 92.7
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 1.8e-60 236.9 124 93.5
unitig_87.g27941 Utricularia gibba HOM05D004291 ORTHO05D005620 1.8e-60 236.9 127 90.6
HanXRQChr04g0112911 Helianthus annuus HOM05D004291 ORTHO05D005620 5.3e-60 235.3 124 92.7
Lalb_Chr24g0400601 Lupinus albus HOM05D004291 ORTHO05D005620 5.3e-60 235.3 117 99.1
Psat0s4951g0120 Pisum sativum HOM05D004291 ORTHO05D005620 7.6e-59 231.5 137 86.1
PGSC0003DMG401031302 Solanum tuberosum HOM05D004291 ORTHO05D005620 8.4e-58 228.0 120 91.7
Lsat_1_v5_gn_6_95140 Lactuca sativa HOM05D004291 ORTHO05D005620 2.5e-57 226.5 124 89.5
PGSC0003DMG400013864 Solanum tuberosum HOM05D004291 ORTHO05D005620 9.6e-54 214.5 113 92.0
Thecc.10G006300 Theobroma cacao HOM05D004291 ORTHO05D005620 8.2e-53 211.5 119 87.4
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 1.1e-52 211.1 111 91.9
SGA_v2.0_scaffold420G51405 Striga asiatica HOM05D004291 ORTHO05D005620 2.6e-51 206.5 129 80.6
CAN.G184.83 Capsicum annuum HOM05D004291 ORTHO05D005620 1.4e-49 200.7 114 86.0
SHI09335 Sapria himalayana HOM05D004291 ORTHO05D005620 1.8e-47 193.7 105 88.6
TAR022G0001 Trochodendron aralioides HOM05D004291 ORTHO05D005620 3.3e-46 189.5 139 64.0
Os04g0343050 Oryza sativa ssp. japonica HOM05D004291 ORTHO05D005620 3.1e-44 183.0 115 80.0
AUR62042348 Chenopodium quinoa HOM05D004291 ORTHO05D005620 2.0e-43 180.3 96 91.7
TAR371G1150 Trochodendron aralioides HOM05D004291 ORTHO05D005620 7.7e-43 178.3 106 86.8
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea HOM05D004291 ORTHO05D005620 1.0e-42 177.9 96 92.7
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea HOM05D004291 ORTHO05D005620 1.0e-42 177.9 96 92.7
AT2G07695 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.8e-42 176.0 99 87.9
ATMG01280 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.8e-42 176.0 99 87.9
CARHR283480 Cardamine hirsuta HOM05D004291 ORTHO05D005620 3.8e-42 176.0 99 87.9
Lsat_1_v5_gn_6_95160 Lactuca sativa HOM05D004291 ORTHO05D005620 1.1e-41 174.5 104 84.6
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 5.5e-41 172.2 111 79.3
Solyc09g015880.4 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-40 170.2 93 87.1
Nn1g09996 Nelumbo nucifera HOM05D004291 ORTHO05D005620 6.1e-40 168.7 87 92.0
Nn1g10097 Nelumbo nucifera HOM05D004291 ORTHO05D005620 6.1e-40 168.7 87 92.0
Oeu042472.1 Olea europaea HOM05D004291 ORTHO05D005620 5.1e-39 165.6 117 66.7
Nitab4.5_0001819g0010 Nicotiana tabacum HOM05D004291 ORTHO05D005620 1.1e-38 164.5 92 84.8
BolSC28t60391H Brassica oleracea HOM05D004291 ORTHO05D005620 2.0e-38 163.7 84 91.7
CAN.G1897.5 Capsicum annuum HOM05D004291 ORTHO05D005620 9.7e-38 161.4 98 80.6
CDE02G1233 Ceratophyllum demersum HOM05D004291 ORTHO05D005620 1.5e-35 154.1 87 85.1
VMungo1309G2873 Vigna mungo HOM05D000045 ORTHO05D001346 1.0e-34 151.4 155 54.8
AUR62001625 Chenopodium quinoa HOM05D004291 ORTHO05D005620 1.1e-33 147.9 84 86.9
Nitab4.5_0000280g0210 Nicotiana tabacum HOM05D004291 ORTHO05D005620 2.5e-33 146.7 142 58.5
CAN.G8.27 Capsicum annuum HOM05D004291 ORTHO05D005620 5.5e-33 145.6 76 89.5
Lalb_Chr23g0276811 Lupinus albus HOM05D004291 ORTHO05D005620 6.1e-32 142.1 72 98.6
Cpa.g.sc555.1 Carica papaya HOM05D004291 ORTHO05D005620 7.9e-32 141.7 84 86.9
Nitab4.5_0007876g0040 Nicotiana tabacum HOM05D004291 ORTHO05D005620 2.3e-31 140.2 103 68.9
Ca_16076_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 6.7e-31 138.7 72 88.9
Cre01.g049500 Chlamydomonas reinhardtii HOM05D004291 ORTHO05D005620 4.4e-30 136.0 105 59.0
Hma1.2p1_0716F.1_g208040 Hydrangea macrophylla HOM05D004291 ORTHO05D005620 4.8e-29 132.5 70 88.6
Psat0s3560g0080 Pisum sativum HOM05D000533 ORTHO05D002807 7.0e-28 128.6 87 74.7
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.1e-28 128.3 121 57.9
MELO3C030794.2 Cucumis melo HOM05D004291 ORTHO05D005620 1.2e-27 127.9 67 88.1
BraSC177t45746Z Brassica rapa HOM05D004291 ORTHO05D005620 2.6e-27 126.7 101 66.3
BraSC77t46631Z Brassica rapa HOM05D004291 ORTHO05D005620 2.6e-27 126.7 70 85.7
MBI05_g05354_MAGBIO Magnolia biondii HOM05D004291 ORTHO05D005620 4.5e-27 125.9 124 55.6
Mapoly0041s0129 Marchantia polymorpha HOM05D004291 ORTHO05D005620 4.5e-27 125.9 76 77.6
Cre03.g154350 Chlamydomonas reinhardtii HOM05D004291 ORTHO05D005620 5.9e-27 125.6 128 46.9
HanXRQMTg0579451 Helianthus annuus HOM05D004291 ORTHO05D005620 5.0e-26 122.5 126 58.7
CAN.G390.18 Capsicum annuum HOM05D004291 ORTHO05D005620 4.2e-25 119.4 61 95.1
ATR0461G001 Amborella trichopoda HOM05D004291 ORTHO05D005620 9.4e-25 118.2 61 95.1
SMO053G0014 Selaginella moellendorffii HOM05D004291 ORTHO05D005620 1.4e-23 114.4 107 54.2
CAN.G15876.1 Capsicum annuum HOM05D004291 ORTHO05D005620 1.8e-23 114.0 80 62.5
Solyc05g045870.2 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.0e-22 110.5 95 63.2
Haze_27535 Corylus avellana HOM05D004291 ORTHO05D005620 3.3e-22 109.8 201 36.8
FAN04G2782 Fragaria x ananassa HOM05D003397 ORTHO05D004390 4.4e-22 109.4 58 86.2
CAN.G1449.6 Capsicum annuum HOM05D004291 ORTHO05D005620 1.4e-20 104.4 56 83.9
Nitab4.5_0000007g0310 Nicotiana tabacum HOM05D004291 ORTHO05D005620 1.4e-20 104.4 70 71.4
Solyc05g045850.3 Solanum lycopersicum HOM05D004291 ORTHO05D005620 5.3e-20 102.4 61 83.6
Solyc05g045930.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.6e-19 100.9 124 49.2
ATR0513G001 Amborella trichopoda HOM05D004291 ORTHO05D005620 2.0e-19 100.5 54 88.9
ATR0461G002 Amborella trichopoda HOM05D004291 ORTHO05D005620 1.9e-17 94.0 54 85.2
Solyc03g063780.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-16 90.5 54 85.2
BraSC48t46285Z Brassica rapa HOM05D004291 ORTHO05D005620 4.7e-16 89.4 42 92.9
BolSC28t60389H Brassica oleracea HOM05D004291 ORTHO05D005620 5.2e-15 85.9 40 92.5
BolSC28t60408H Brassica oleracea HOM05D004291 ORTHO05D005620 5.2e-15 85.9 40 92.5
HanXRQChr00c0192g0572351 Helianthus annuus HOM05D004291 ORTHO05D005620 3.4e-14 83.2 71 64.8
ClCG06G009310 Citrullus lanatus HOM05D004291 ORTHO05D005620 4.4e-14 82.8 42 90.5
Sabra01G0004500 Salix brachista HOM05D000521 ORTHO05D006286 5.7e-14 82.4 74 63.5
PGSC0003DMG400020450 Solanum tuberosum HOM05D004291 ORTHO05D005620 2.2e-13 80.5 48 77.1
SMO053G0010 Selaginella moellendorffii HOM05D004291 ORTHO05D005620 6.3e-13 79.0 110 46.4
Peaxi162Scf00268g01210 Petunia axillaris HOM05D004291 ORTHO05D005620 1.1e-12 78.2 40 90.0
CAN.G687.3 Capsicum annuum HOM05D004291 ORTHO05D005620 2.4e-12 77.0 48 85.4
Solyc02g021365.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.4e-12 77.0 63 65.1
SHI33022 Sapria himalayana HOM05D004291 ORTHO05D005620 9.1e-12 75.1 52 76.9
Peaxi162Scf00187g00115 Petunia axillaris HOM05D004291 ORTHO05D005620 2.7e-11 73.6 44 79.5
CAN.G505.7 Capsicum annuum HOM05D004537 ORTHO05D005492 3.8e-10 69.7 49 67.3
SHI06816 Sapria himalayana HOM05D004291 ORTHO05D005620 5.0e-10 69.3 67 55.2
CAN.G595.5 Capsicum annuum HOM05D004291 ORTHO05D005620 2.5e-09 67.0 49 69.4
SHI04268 Sapria himalayana HOM05D001960 ORTHO05D004348 9.4e-09 65.1 58 56.9
SHI08953 Sapria himalayana HOM05D004291 ORTHO05D005620 6.1e-08 62.4 156 30.8
Nitab4.5_0000216g0120 Nicotiana tabacum HOM05D004291 ORTHO05D005620 1.0e-07 61.6 29 89.7
Mapoly0007s0023 Marchantia polymorpha HOM05D004291 ORTHO05D005620 1.8e-07 60.8 49 63.3
Sc08g0004800 Simmondsia chinensis HOM05D004291 ORTHO05D005620 1.8e-07 60.8 47 68.1
CAN.G889.6 Capsicum annuum HOM05D004537 ORTHO05D005492 2.0e-06 57.4 41 70.7


User provided reference genes

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