Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 4.0e-190 667.9 338 100.0
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.1e-134 483.8 339 70.8
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 3.2e-131 472.2 355 67.9
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 2.3e-129 466.1 339 69.0
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 2.6e-120 436.0 331 65.6
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 4.4e-120 435.3 331 66.2
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 4.1e-118 428.7 333 65.5
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 5.4e-118 428.3 335 64.8
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 2.0e-117 426.4 331 65.0
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 3.5e-117 425.6 339 64.3
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 6.6e-116 421.4 330 65.2
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 2.5e-115 419.5 333 64.0
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 5.6e-115 418.3 336 65.5
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 1.2e-114 417.2 335 62.1
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 1.6e-114 416.8 330 64.2
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.6e-114 416.8 331 63.7
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 3.6e-114 415.6 337 62.9
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.6e-114 415.6 332 63.6
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 6.2e-114 414.8 330 63.9
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 8.0e-114 414.5 339 63.7
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 8.0e-114 414.5 333 63.1
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.4e-113 413.7 329 63.5
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.4e-113 413.7 331 63.7
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.8e-113 413.3 331 63.1
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 1.8e-113 413.3 333 63.4
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 1.8e-113 413.3 330 62.7
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 4.0e-113 412.1 331 64.0
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 4.0e-113 412.1 332 63.6
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 8.9e-113 411.0 332 62.7
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 1.2e-112 410.6 330 63.3
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 2.6e-112 409.5 331 62.2
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 7.5e-112 407.9 332 63.0
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.3e-111 407.1 330 63.0
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 1.7e-111 406.8 330 62.4
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 1.7e-111 406.8 330 61.5
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 2.2e-111 406.4 330 62.4
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 2.9e-111 406.0 331 62.2
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 2.9e-111 406.0 329 65.0
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 3.7e-111 405.6 331 61.3
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 4.9e-111 405.2 332 61.7
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 4.9e-111 405.2 331 62.2
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 8.3e-111 404.4 331 61.0
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 1.4e-110 403.7 330 62.1
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 1.4e-110 403.7 333 60.7
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 4.1e-110 402.1 331 63.1
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 5.4e-110 401.7 354 59.0
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 1.6e-109 400.2 337 61.7
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 2.7e-109 399.4 333 59.8
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 7.8e-109 397.9 330 60.3
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 1.0e-108 397.5 333 61.0
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 1.0e-108 397.5 329 60.5
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 3.0e-108 396.0 332 61.1
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 3.0e-108 396.0 332 61.1
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 8.6e-108 394.4 343 60.3
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 8.6e-108 394.4 333 60.7
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 4.3e-107 392.1 331 59.5
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 9.5e-107 391.0 376 55.6
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 6.2e-106 388.3 346 57.8
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 8.1e-106 387.9 333 60.4
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 2.0e-104 383.3 333 61.0
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 2.6e-104 382.9 332 59.9
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 4.4e-104 382.1 330 60.0
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.9e-103 378.6 335 57.9
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 4.1e-102 375.6 334 58.1
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 9.2e-102 374.4 332 57.2
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 1.2e-101 374.0 329 59.9
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 2.7e-101 372.9 332 56.9
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 3.5e-101 372.5 332 56.6
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 4.6e-101 372.1 329 58.7
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 1.0e-100 370.9 336 58.3
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 4.3e-99 365.5 322 61.5
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 7.3e-99 364.8 332 56.0
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 9.5e-99 364.4 330 57.6
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 2.1e-98 363.2 332 55.7
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 2.1e-98 363.2 332 55.7
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 2.3e-97 359.8 332 55.1
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 3.4e-96 355.9 341 54.5
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 3.4e-96 355.9 330 58.2
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 5.8e-96 355.1 330 57.9
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 3.2e-94 349.4 336 57.4
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 5.4e-94 348.6 286 63.3
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 2.1e-93 346.7 332 53.9
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 3.5e-93 345.9 332 54.8
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 6.0e-93 345.1 352 51.1
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 6.6e-92 341.7 333 54.4
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 1.1e-91 340.9 332 52.1
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.5e-91 340.5 336 51.8
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 1.2e-90 337.4 332 53.3
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 1.6e-90 337.0 330 53.9
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 8.1e-90 334.7 337 54.0
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 2.4e-89 333.2 332 53.3
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 2.4e-86 323.2 334 53.0
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 4.2e-86 322.4 241 68.5
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.6e-82 310.5 314 53.8
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 2.3e-76 290.0 276 56.5
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.9e-75 287.0 301 53.5
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 7.4e-75 285.0 359 43.7
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.8e-73 280.4 338 47.0
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 3.5e-69 266.2 338 45.6
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 3.4e-64 249.6 245 53.5
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 1.3e-63 247.7 321 45.8
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 5.1e-60 235.7 177 66.1
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 2.8e-58 229.9 462 34.6
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.1e-54 218.0 345 39.7
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 2.5e-54 216.9 334 40.4
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.8e-49 200.7 157 67.5
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 5.5e-46 189.1 189 52.9
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 6.3e-42 175.6 150 60.0
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 3.4e-40 169.9 192 52.1
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.9e-39 166.8 164 50.6
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.4e-38 164.5 147 55.1
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 1.7e-31 141.0 150 48.0
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 1.0e-28 131.7 102 62.7
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 2.6e-27 127.1 161 46.0
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 1.5e-22 111.3 81 59.3
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 7.5e-19 99.0 73 60.3
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 1.3e-18 98.2 58 70.7
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 1.6e-16 91.3 132 37.9
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 1.5e-14 84.7 129 42.6
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 1.7e-10 71.2 58 58.6
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 8.3e-10 68.9 60 50.0
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 5.9e-08 62.8 53 64.2
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 1.3e-07 61.6 77 42.9
Dinv43551 Davidia involucrata HOM05D006268 ORTHO05D180404 1.9e-06 57.8 75 44.0


User provided reference genes

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