Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25680 Selenicereus undatus HOM05D001760 ORTHO05D001691 6.4e-103 377.5 199 100.0
EL10Ac2g02554 Beta vulgaris HOM05D001760 ORTHO05D001691 1.2e-19 100.9 77 68.8
AUR62024853 Chenopodium quinoa HOM05D001760 ORTHO05D001691 5.7e-19 98.6 69 69.6
AUR62032366 Chenopodium quinoa HOM05D001760 ORTHO05D001691 7.5e-19 98.2 69 68.1
Ah.09g228760 Amaranthus hybridus HOM05D001760 ORTHO05D001691 2.9e-18 96.3 85 61.2
Ah.10g025800 Amaranthus hybridus HOM05D001760 ORTHO05D001691 1.1e-17 94.4 77 66.2
Sc03g0001950 Simmondsia chinensis HOM05D001760 ORTHO05D001691 5.4e-17 92.0 70 62.9
Dinv30055 Davidia involucrata HOM05D001760 ORTHO05D001691 2.7e-16 89.7 109 47.7
Manes.12G109600 Manihot esculenta HOM05D001760 ORTHO05D001691 2.7e-16 89.7 90 54.4
GSVIVG01000169001 Vitis vinifera HOM05D001760 ORTHO05D001691 7.8e-16 88.2 109 47.7
Cpa.g.sc6.66 Carica papaya HOM05D001760 ORTHO05D001691 1.7e-15 87.0 72 52.8
Dinv26889 Davidia involucrata HOM05D001760 ORTHO05D001691 1.7e-15 87.0 79 54.4
Cc07_g06640 Coffea canephora HOM05D001760 ORTHO05D001691 5.0e-15 85.5 70 52.9
Ciclev10024899m.g Citrus clementina HOM05D001760 ORTHO05D001691 8.6e-15 84.7 138 42.0
Atru.chr3.218 Acer truncatum HOM05D001760 ORTHO05D001691 1.5e-14 84.0 109 45.9
CiPaw.01G008600 Carya illinoinensis HOM05D001760 ORTHO05D001691 1.5e-14 84.0 109 44.0
EL10Ac2g02551 Beta vulgaris HOM05D001760 ORTHO05D001691 1.9e-14 83.6 69 62.3
TWI09G0363 Tripterygium wilfordii HOM05D001760 ORTHO05D001691 1.9e-14 83.6 75 52.0
Sed0028090 Sechium edule HOM05D001760 ORTHO05D001691 2.5e-14 83.2 77 54.5
Hma1.2p1_0239F.1_g099870 Hydrangea macrophylla HOM05D001760 ORTHO05D001691 5.6e-14 82.0 88 48.9
TAR627G0512 Trochodendron aralioides HOM05D001760 ORTHO05D001691 5.6e-14 82.0 71 50.7
Hma1.2p1_0017F.1_g012010 Hydrangea macrophylla HOM05D001760 ORTHO05D001691 1.2e-13 80.9 109 44.0
Potri.007G051000 Populus trichocarpa HOM05D001760 ORTHO05D001691 1.2e-13 80.9 134 36.6
Cfa004085 Carpinus fangiana HOM05D001760 ORTHO05D001691 2.1e-13 80.1 79 51.9
Haze_15329 Corylus avellana HOM05D001760 ORTHO05D001691 2.8e-13 79.7 68 54.4
PSO541G4419 Papaver somniferum HOM05D001760 ORTHO05D001691 2.8e-13 79.7 66 50.0
PSO675G5165 Papaver somniferum HOM05D001760 ORTHO05D001691 2.8e-13 79.7 66 50.0
Sabra05G0114600 Salix brachista HOM05D001760 ORTHO05D001691 2.8e-13 79.7 125 38.4
Sabra05G0115500 Salix brachista HOM05D001760 ORTHO05D001691 2.8e-13 79.7 125 38.4
TWI73G0164 Tripterygium wilfordii HOM05D001760 ORTHO05D001691 2.8e-13 79.7 114 42.1
Lj7C86G4 Lonicera japonica HOM05D001760 ORTHO05D001691 3.6e-13 79.3 84 50.0
Sabra07G0045100 Salix brachista HOM05D001760 ORTHO05D001691 3.6e-13 79.3 134 36.6
TWI53G0727 Tripterygium wilfordii HOM05D001760 ORTHO05D001691 3.6e-13 79.3 88 45.5
Potri.005G144700 Populus trichocarpa HOM05D001760 ORTHO05D001691 6.2e-13 78.6 159 34.0
Thecc.01G066800 Theobroma cacao HOM05D001760 ORTHO05D001691 8.0e-13 78.2 70 50.0
CsaV3_2G016590 Cucumis sativus L. HOM05D001760 ORTHO05D001691 1.1e-12 77.8 77 51.9
MBI02_g37507_MAGBIO Magnolia biondii HOM05D001760 ORTHO05D001691 2.3e-12 76.6 75 50.7
MBI02_g38471_MAGBIO Magnolia biondii HOM05D001760 ORTHO05D001691 2.3e-12 76.6 75 50.7
arahy.Tifrunner.gnm1.ann1.6H61SH Arachis hypogaea HOM05D001760 ORTHO05D001691 3.1e-12 76.3 70 45.7
Duzib264G0410 Durio zibethinus HOM05D001760 ORTHO05D001691 3.1e-12 76.3 110 45.5
vmacro05227 Vaccinium macrocarpon HOM05D001760 ORTHO05D001691 3.1e-12 76.3 67 52.2
COL.COLO4_11514 Corchorus olitorius HOM05D001760 ORTHO05D001691 4.0e-12 75.9 77 53.2
Gohir.A12G067900 Gossypium hirsutum HOM05D001760 ORTHO05D001691 4.0e-12 75.9 86 50.0
Gohir.D12G072400 Gossypium hirsutum HOM05D001760 ORTHO05D001691 4.0e-12 75.9 86 52.3
MELO3C020869.2 Cucumis melo HOM05D000261 ORTHO05D002902 5.2e-12 75.5 74 52.7
Gohir.D11G205000 Gossypium hirsutum HOM05D001760 ORTHO05D001691 5.2e-12 75.5 86 51.2
Gorai.007G219900 Gossypium raimondii HOM05D001760 ORTHO05D001691 5.2e-12 75.5 86 51.2
Oeu036471.1 Olea europaea HOM05D001760 ORTHO05D001691 5.2e-12 75.5 104 42.3
arahy.Tifrunner.gnm1.ann1.PHM8DT Arachis hypogaea HOM05D001760 ORTHO05D001691 6.8e-12 75.1 70 45.7
Migut.A00589 Erythranthe guttata HOM05D001760 ORTHO05D001691 8.9e-12 74.7 66 53.0
Nn7g37787 Nelumbo nucifera HOM05D001760 ORTHO05D001691 8.9e-12 74.7 74 44.6
Nitab4.5_0000023g0170 Nicotiana tabacum HOM05D001760 ORTHO05D001691 8.9e-12 74.7 66 54.5
Oeu017101.2 Olea europaea HOM05D001760 ORTHO05D001691 8.9e-12 74.7 65 55.4
Actinidia32816 Actinidia chinensis HOM05D001760 ORTHO05D001691 1.2e-11 74.3 87 43.7
arahy.Tifrunner.gnm1.ann1.K7JVVM Arachis hypogaea HOM05D001760 ORTHO05D001691 1.5e-11 73.9 68 50.0
Gorai.008G079700 Gossypium raimondii HOM05D001760 ORTHO05D001691 1.5e-11 73.9 77 53.2
MBI18_g27142_MAGBIO Magnolia biondii HOM05D001760 ORTHO05D001691 1.5e-11 73.9 84 39.3
Manes.13G115500 Manihot esculenta HOM05D001760 ORTHO05D001691 2.0e-11 73.6 172 36.0
arahy.Tifrunner.gnm1.ann1.6XZA8Y Arachis hypogaea HOM05D001760 ORTHO05D001691 2.6e-11 73.2 68 48.5
FvH4_1g17050 Fragaria vesca HOM05D001760 ORTHO05D001691 2.6e-11 73.2 70 47.1
FAN26G1673 Fragaria x ananassa HOM05D001760 ORTHO05D001691 2.6e-11 73.2 70 47.1
Gohir.A11G218750 Gossypium hirsutum HOM05D001760 ORTHO05D001691 2.6e-11 73.2 86 48.8
Phvul.006G076000 Phaseolus vulgaris HOM05D001760 ORTHO05D001691 2.6e-11 73.2 70 47.1
Lj6g0019502 Lotus japonicus HOM05D001760 ORTHO05D001691 3.4e-11 72.8 70 44.3
Actinidia36449 Actinidia chinensis HOM05D001760 ORTHO05D001691 5.8e-11 72.0 82 46.3
CSS0010960 Camellia sinensis var. sinensis HOM05D001760 ORTHO05D001691 5.8e-11 72.0 87 47.1
CSS0017472 Camellia sinensis var. sinensis HOM05D001760 ORTHO05D001691 5.8e-11 72.0 87 47.1
Lalb_Chr18g0054361 Lupinus albus HOM05D001760 ORTHO05D001691 5.8e-11 72.0 65 50.8
Actinidia12004 Actinidia chinensis HOM05D001760 ORTHO05D001691 7.5e-11 71.6 90 43.3
MSTRG.1787 Avicennia marina HOM05D001760 ORTHO05D001691 7.5e-11 71.6 116 37.1
Duzib187G1688 Durio zibethinus HOM05D001760 ORTHO05D001691 7.5e-11 71.6 79 46.8
Eucgr.I00736 Eucalyptus grandis HOM05D001760 ORTHO05D001691 7.5e-11 71.6 187 29.9
FAN19G0899 Fragaria x ananassa HOM05D001760 ORTHO05D001691 7.5e-11 71.6 130 37.7
HanXRQChr12g0373301 Helianthus annuus HOM05D001760 ORTHO05D001691 7.5e-11 71.6 118 40.7
Sc16g0004940 Simmondsia chinensis HOM05D001760 ORTHO05D001691 7.5e-11 71.6 71 49.3
Aqoxy1G01481 Aquilegia oxysepala HOM05D001760 ORTHO05D001691 9.8e-11 71.2 94 39.4
Gohir.A02G153900 Gossypium hirsutum HOM05D001760 ORTHO05D001691 9.8e-11 71.2 110 40.9
Gorai.001G172500 Gossypium raimondii HOM05D001760 ORTHO05D001691 9.8e-11 71.2 62 58.1
VMungo0540G0317 Vigna mungo HOM05D001760 ORTHO05D001691 9.8e-11 71.2 65 47.7
Glyma.18G055200 Glycine max HOM05D001760 ORTHO05D001691 1.3e-10 70.9 103 37.9
Lj4C158T3 Lonicera japonica HOM05D001760 ORTHO05D001691 1.3e-10 70.9 73 47.9
RcHm_v2.0_Chr2g0107211 Rosa chinensis HOM05D001760 ORTHO05D001691 1.3e-10 70.9 130 36.2
CANSAT01G1330 Cannabis sativa HOM05D001760 ORTHO05D001691 2.2e-10 70.1 103 41.7
Glyma.11G161500 Glycine max HOM05D001760 ORTHO05D001691 2.2e-10 70.1 103 37.9
ATR0165G061 Amborella trichopoda HOM05D001760 ORTHO05D001691 3.7e-10 69.3 71 39.4
Sp4g02200 Schrenkiella parvula HOM05D001760 ORTHO05D001691 3.7e-10 69.3 99 36.4
TPR.G24975 Trifolium pratense HOM05D001760 ORTHO05D001691 3.7e-10 69.3 164 31.1
Lalb_Chr15g0085981 Lupinus albus HOM05D001760 ORTHO05D001691 4.9e-10 68.9 65 47.7
Psat0s165g0040 Pisum sativum HOM05D001760 ORTHO05D001691 4.9e-10 68.9 70 47.1
Ca_15025_v3 Cicer arietinum L. HOM05D001760 ORTHO05D001691 6.4e-10 68.6 70 47.1
Thhalv10000047m.g Eutrema salsugineum HOM05D001760 ORTHO05D001691 6.4e-10 68.6 130 30.0
Gorai.003G028000 Gossypium raimondii HOM05D001760 ORTHO05D001691 6.4e-10 68.6 69 49.3
VMungo0647G1663 Vigna mungo HOM05D001760 ORTHO05D001691 6.4e-10 68.6 71 42.3
MD02G1180700 Malus domestica HOM05D001760 ORTHO05D001691 8.3e-10 68.2 70 48.6
Oeu001191.1 Olea europaea HOM05D001760 ORTHO05D001691 8.3e-10 68.2 65 49.2
Solyc01g014230.4 Solanum lycopersicum HOM05D001760 ORTHO05D001691 8.3e-10 68.2 64 48.4
Sopen01g008310 Solanum pennellii HOM05D001760 ORTHO05D001691 8.3e-10 68.2 64 48.4
CAN.G442.7 Capsicum annuum HOM05D001760 ORTHO05D001691 1.1e-09 67.8 64 50.0
Rhsim08G0096500 Rhododendron simsii HOM05D001760 ORTHO05D001691 1.1e-09 67.8 73 45.2
FAN28G2089 Fragaria x ananassa HOM05D001760 ORTHO05D001691 1.4e-09 67.4 130 36.2
Gohir.D03G026450 Gossypium hirsutum HOM05D001760 ORTHO05D001691 1.4e-09 67.4 132 35.6
Lsat_1_v5_gn_4_162261 Lactuca sativa HOM05D001760 ORTHO05D001691 1.9e-09 67.0 102 40.2
MD15G1291600 Malus domestica HOM05D001760 ORTHO05D001691 1.9e-09 67.0 82 46.3
Medtr3g466220 Medicago truncatula HOM05D001760 ORTHO05D001691 1.9e-09 67.0 70 44.3
Rhsim10G0104900 Rhododendron simsii HOM05D001760 ORTHO05D001691 2.4e-09 66.6 62 48.4
Prupe.6G225600 Prunus persica HOM05D001760 ORTHO05D001691 3.2e-09 66.2 109 39.4
Solyc12g100000.3 Solanum lycopersicum HOM05D001760 ORTHO05D001691 3.2e-09 66.2 70 44.3
TAR626G1413 Trochodendron aralioides HOM05D001760 ORTHO05D001691 3.2e-09 66.2 64 45.3
Gorai.003G028100 Gossypium raimondii HOM05D001760 ORTHO05D001691 4.1e-09 65.9 71 46.5
Peaxi162Scf00062g00922 Petunia axillaris HOM05D001760 ORTHO05D001691 4.1e-09 65.9 64 43.8
SGA_v2.0_scaffold96G29047 Striga asiatica HOM05D001760 ORTHO05D001691 4.1e-09 65.9 88 46.6
A04p17690 Brassica napus HOM05D001760 ORTHO05D001691 5.4e-09 65.5 100 34.0
BraA04t17388Z Brassica rapa HOM05D001760 ORTHO05D001691 5.4e-09 65.5 100 34.0
Lsat_1_v5_gn_2_84561 Lactuca sativa HOM05D001760 ORTHO05D001691 7.0e-09 65.1 65 49.2
Lalb_Chr10g0103711 Lupinus albus HOM05D001760 ORTHO05D001691 7.0e-09 65.1 63 49.2
AL4G12980 Arabidopsis lyrata HOM05D001760 ORTHO05D001691 9.2e-09 64.7 110 37.3
Sopen12g034620 Solanum pennellii HOM05D001760 ORTHO05D001691 9.2e-09 64.7 70 42.9
THA.LOC104807616 Tarenaya hassleriana HOM05D001760 ORTHO05D001691 9.2e-09 64.7 98 31.6
BcaC02g08565 Brassica carinata HOM05D001760 ORTHO05D001691 1.2e-08 64.3 95 34.7
CARHR114370 Cardamine hirsuta HOM05D001760 ORTHO05D001691 1.6e-08 63.9 99 33.3
Glyma.02G234300 Glycine max HOM05D001760 ORTHO05D001691 1.6e-08 63.9 109 33.9
HanXRQChr11g0322511 Helianthus annuus HOM05D001760 ORTHO05D001691 2.0e-08 63.5 64 40.6
SalBow5G3737 Salvia bowleyana HOM05D001760 ORTHO05D001691 2.0e-08 63.5 98 37.8
Aqoxy5G00931 Aquilegia oxysepala HOM05D001760 ORTHO05D001691 3.5e-08 62.8 73 43.8
Phvul.008G249400 Phaseolus vulgaris HOM05D001760 ORTHO05D001691 3.5e-08 62.8 94 35.1
vmacro17982 Vaccinium macrocarpon HOM05D001760 ORTHO05D001691 3.5e-08 62.8 58 48.3
AT2G23140 Arabidopsis thaliana HOM05D001760 ORTHO05D001691 4.6e-08 62.4 70 37.1
ECA232G1163 Erigeron canadensis HOM05D001760 ORTHO05D001691 4.6e-08 62.4 102 35.3
HanXRQChr14g0439231 Helianthus annuus HOM05D001760 ORTHO05D001691 4.6e-08 62.4 77 41.6
MD10G1183200 Malus domestica HOM05D001760 ORTHO05D001691 4.6e-08 62.4 63 39.7
PGR004G0267 Punica granatum HOM05D001760 ORTHO05D001691 4.6e-08 62.4 65 44.6
Atru.chr5.1707 Acer truncatum HOM05D001760 ORTHO05D001691 6.0e-08 62.0 85 35.3
Aa31LG7G13770 Aethionema arabicum HOM05D001760 ORTHO05D001691 6.0e-08 62.0 122 32.0
BcaB06g27883 Brassica carinata HOM05D001760 ORTHO05D001691 6.0e-08 62.0 98 33.7
Nitab4.5_0001925g0230 Nicotiana tabacum HOM05D001760 ORTHO05D001691 6.0e-08 62.0 124 32.3
Nitab4.5_0002757g0030 Nicotiana tabacum HOM05D001760 ORTHO05D001691 6.0e-08 62.0 64 43.8
Carub.0004s0235 Capsella rubella HOM05D001760 ORTHO05D001691 7.8e-08 61.6 70 35.7
ECA238G3399 Erigeron canadensis HOM05D001760 ORTHO05D001691 7.8e-08 61.6 108 33.3
BraA07t29379Z Brassica rapa HOM05D001760 ORTHO05D001691 1.0e-07 61.2 74 40.5
CARHR280270 Cardamine hirsuta HOM05D001760 ORTHO05D001691 1.0e-07 61.2 121 34.7
Gohir.D07G219700 Gossypium hirsutum HOM05D001760 ORTHO05D001691 1.0e-07 61.2 67 37.3
Gorai.001G254100 Gossypium raimondii HOM05D001760 ORTHO05D001691 1.0e-07 61.2 67 37.3
Lalb_Chr17g0345551 Lupinus albus HOM05D001760 ORTHO05D001691 1.0e-07 61.2 71 43.7
BolC4t26820H Brassica oleracea HOM05D001760 ORTHO05D001691 1.3e-07 60.8 105 34.3
BolC7t42953H Brassica oleracea HOM05D001760 ORTHO05D001691 1.3e-07 60.8 74 40.5
Duzib133G1341 Durio zibethinus HOM05D001760 ORTHO05D001691 1.3e-07 60.8 64 40.6
FAN20G2828 Fragaria x ananassa HOM05D001760 ORTHO05D001691 1.3e-07 60.8 63 39.7
A07p16550 Brassica napus HOM05D001760 ORTHO05D001691 1.7e-07 60.5 132 33.3
PGSC0003DMG400017970 Solanum tuberosum HOM05D001760 ORTHO05D001691 1.7e-07 60.5 64 42.2
Peaxi162Scf00968g00210 Petunia axillaris HOM05D001760 ORTHO05D001691 3.0e-07 59.7 68 44.1
Aqoxy2G03658 Aquilegia oxysepala HOM05D001760 ORTHO05D001691 5.0e-07 58.9 64 37.5
Nitab4.5_0009016g0010 Nicotiana tabacum HOM05D001760 ORTHO05D001691 5.0e-07 58.9 61 47.5
Gohir.A07G213500 Gossypium hirsutum HOM05D001760 ORTHO05D001691 6.6e-07 58.5 67 35.8
Lj2A1150G36 Lonicera japonica HOM05D001760 ORTHO05D001691 6.6e-07 58.5 91 35.2
RcHm_v2.0_Chr6g0287911 Rosa chinensis HOM05D001760 ORTHO05D001691 6.6e-07 58.5 178 28.7
BcaC02g08567 Brassica carinata HOM05D001760 ORTHO05D001691 8.6e-07 58.2 110 32.7
LjContig00141g0000073 Lotus japonicus HOM05D001760 ORTHO05D001691 8.6e-07 58.2 64 37.5
C07p24240 Brassica napus HOM05D001760 ORTHO05D001691 1.1e-06 57.8 74 40.5
Duzib138G1761 Durio zibethinus HOM05D001760 ORTHO05D001691 1.1e-06 57.8 116 31.0
C08p40050 Brassica napus HOM05D000702 ORTHO05D001796 1.5e-06 57.4 71 35.2
BolC8t51576H Brassica oleracea HOM05D000702 ORTHO05D001796 1.5e-06 57.4 71 35.2
Thecc.01G257000 Theobroma cacao HOM05D001760 ORTHO05D001691 1.5e-06 57.4 64 39.1
Aa31LG1G15890 Aethionema arabicum HOM05D001760 ORTHO05D001691 1.9e-06 57.0 119 33.6
BcaC07g41004 Brassica carinata HOM05D001760 ORTHO05D001691 1.9e-06 57.0 71 35.2
FAN15G1301 Fragaria x ananassa HOM05D001760 ORTHO05D001691 1.9e-06 57.0 190 28.4
FAN27G2481 Fragaria x ananassa HOM05D001760 ORTHO05D001691 1.9e-06 57.0 190 28.4
Gohir.A07G149200 Gossypium hirsutum HOM05D001760 ORTHO05D001691 1.9e-06 57.0 65 40.0
Gorai.001G178000 Gossypium raimondii HOM05D001760 ORTHO05D001691 1.9e-06 57.0 65 40.0
Prupe.8G222400 Prunus persica HOM05D001760 ORTHO05D001691 1.9e-06 57.0 63 36.5
A09p57060 Brassica napus HOM05D000702 ORTHO05D001691 2.5e-06 56.6 71 35.2
BraA09t41098Z Brassica rapa HOM05D000702 ORTHO05D001796 2.5e-06 56.6 71 35.2
Sp2g29320 Schrenkiella parvula HOM05D001760 ORTHO05D001691 2.5e-06 56.6 132 31.1
BcaNung06596 Brassica carinata HOM05D001760 ORTHO05D001691 3.3e-06 56.2 144 29.9
AT5G67340 Arabidopsis thaliana HOM05D001760 ORTHO05D001691 4.3e-06 55.8 126 32.5
BcaB04g20065 Brassica carinata HOM05D001760 ORTHO05D001691 4.3e-06 55.8 144 29.9
A09p09430 Brassica napus HOM05D001760 ORTHO05D001691 4.3e-06 55.8 144 30.6
Gohir.D07G155300 Gossypium hirsutum HOM05D001760 ORTHO05D001691 4.3e-06 55.8 65 38.5
FAN24G3104 Fragaria x ananassa HOM05D001760 ORTHO05D001691 5.6e-06 55.5 190 28.4
AL8G43990 Arabidopsis lyrata HOM05D001760 ORTHO05D001691 7.3e-06 55.1 142 31.0
C09p11110 Brassica napus HOM05D001760 ORTHO05D001691 7.3e-06 55.1 144 29.9
BraA09t36592Z Brassica rapa HOM05D001760 ORTHO05D001691 7.3e-06 55.1 144 30.6
Potri.005G225400 Populus trichocarpa HOM05D001760 ORTHO05D001691 7.3e-06 55.1 63 36.5
BcaC04g23208 Brassica carinata HOM05D001760 ORTHO05D001691 9.5e-06 54.7 144 29.9
BolC9t54000H Brassica oleracea HOM05D001760 ORTHO05D001691 9.5e-06 54.7 144 29.9
Ciclev10018951m.g Citrus clementina HOM05D001760 ORTHO05D001691 9.5e-06 54.7 67 35.8


User provided reference genes

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