Gene: vmacro17982

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro17982
  • Transcript Identifier vmacro17982-RA
  • Gene Type Coding gene
  • Location chr3_Vaccinium_macrocarpon_Stevens_v1 : 11558039-11563318 : negative

Gene Family Information

  • ID HOM05D001760
  • #Genes/#Species 369/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro17982_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to PUB4: U-box domain-containing protein 4 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT2G23140
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT2G23140
GO:1904821
ISO
PLAZA Integrative Orthologychloroplast disassembly AT2G23140
GO:0034614
ISO
PLAZA Integrative Orthologycellular response to reactive oxygen species AT2G23140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT2G23140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G23140

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000225 Armadillo
IPR003613 U box domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase