Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 4.0e-268 927.5 481 100.0
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 6.2e-168 594.7 477 65.0
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.4e-159 566.2 477 61.6
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.4e-148 530.4 475 58.9
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 4.5e-142 508.8 438 60.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 6.0e-139 498.4 487 57.5
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.4e-127 459.9 477 53.5
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.6e-120 437.2 474 52.1
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 2.8e-120 436.4 474 50.0
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 8.2e-120 434.9 476 51.9
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 1.1e-119 434.5 472 51.3
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.7e-117 427.2 464 51.1
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 3.8e-117 426.0 473 50.3
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 3.6e-115 419.5 465 49.9
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.8e-114 417.2 465 51.4
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.1e-113 414.5 467 50.7
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 7.4e-113 411.8 475 48.6
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.1e-111 407.9 465 48.6
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.8e-111 407.1 464 48.9
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.1e-108 397.9 492 46.7
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.4e-108 397.5 470 48.3
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 2.7e-107 393.3 475 47.4
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 3.0e-106 389.8 460 47.2
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 1.5e-105 387.5 463 46.7
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 2.0e-105 387.1 474 46.6
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.6e-105 386.7 483 46.6
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 4.4e-105 386.0 460 46.5
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 4.4e-105 386.0 482 47.3
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.2e-104 383.6 463 46.4
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 2.8e-104 383.3 471 47.6
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 8.2e-104 381.7 485 47.0
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 8.2e-104 381.7 497 46.3
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.1e-103 381.3 468 48.3
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 2.4e-103 380.2 475 46.5
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.4e-103 380.2 475 46.5
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.4e-103 380.2 463 48.4
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.2e-102 377.9 474 44.7
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.5e-102 377.5 484 45.7
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 7.7e-102 375.2 466 44.8
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 8.5e-101 371.7 478 45.0
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 8.5e-101 371.7 469 47.1
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 5.5e-100 369.0 464 46.6
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 9.4e-100 368.2 413 48.7
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.6e-99 367.5 475 45.9
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 6.1e-99 365.5 473 45.5
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.0e-98 364.8 474 46.2
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.8e-98 364.0 466 44.0
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.1e-97 361.3 448 45.5
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 2.0e-97 360.5 481 44.7
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.6e-97 360.1 473 46.1
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 2.6e-97 360.1 473 45.7
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 3.3e-97 359.8 474 45.8
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.7e-96 357.5 463 46.4
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.2e-96 357.1 452 45.1
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 2.8e-96 356.7 470 44.0
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-95 354.0 468 44.7
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.8e-95 354.0 450 47.3
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 7.0e-95 352.1 464 44.4
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 5.9e-94 349.0 465 44.3
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 1.7e-93 347.4 468 45.5
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 3.8e-93 346.3 465 44.3
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 5.0e-93 345.9 480 45.2
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 8.5e-93 345.1 445 47.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.6e-91 340.9 457 44.6
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.6e-91 340.9 459 44.4
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.7e-91 340.1 470 43.4
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 3.6e-91 339.7 476 42.4
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 3.6e-91 339.7 484 42.4
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 4.7e-91 339.3 469 44.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.4e-90 337.8 436 44.5
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 2.3e-90 337.0 474 43.7
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 3.0e-90 336.7 465 42.8
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 3.0e-90 336.7 458 45.0
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 4.0e-90 336.3 441 45.1
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 5.2e-90 335.9 484 41.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 8.8e-90 335.1 465 42.8
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 6.3e-88 328.9 474 42.4
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 6.3e-88 328.9 484 41.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 6.3e-88 328.9 474 42.2
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 2.4e-87 327.0 484 41.5
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 4.1e-87 326.2 474 43.9
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 4.5e-86 322.8 411 43.3
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.3e-85 321.2 490 40.6
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 6.5e-85 318.9 442 43.2
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.5e-84 317.8 463 42.1
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 8.0e-83 312.0 467 43.5
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.4e-82 311.2 337 49.6
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 9.8e-81 305.1 344 48.3
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 2.0e-78 297.4 459 38.8
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 7.7e-78 295.4 464 39.2
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.1e-76 291.6 473 37.8
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 6.8e-74 282.3 353 45.6
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 8.0e-67 258.8 468 36.8
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.8e-66 257.7 300 48.0
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.6e-65 253.8 301 46.2
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 9.2e-63 245.4 465 36.3
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.6e-62 244.6 337 44.2
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.3e-53 214.9 327 41.0
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.3e-45 188.3 182 53.3
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 9.3e-39 165.6 366 33.9
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 2.3e-29 134.4 226 36.3
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-26 123.6 140 45.7
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 5.8e-25 119.8 126 49.2
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.9e-24 116.7 126 48.4
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.9e-24 116.7 126 48.4
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 3.0e-21 107.5 218 37.6
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 5.1e-21 106.7 162 34.6
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 5.1e-21 106.7 162 34.6
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.9e-20 104.8 137 44.5
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.6e-19 101.7 118 46.6
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 2.1e-19 101.3 492 24.6
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.8e-18 98.2 432 26.9
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.6e-17 94.4 256 29.7
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.5e-17 93.6 129 42.6
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 4.9e-16 90.1 91 57.1
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.9e-13 80.5 120 40.0
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 8.2e-11 72.8 413 24.7
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.1e-10 72.4 129 37.2
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 1.8e-10 71.6 78 48.7
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 2.6e-09 67.8 55 54.5
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 3.5e-06 57.4 175 28.0
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 3.5e-06 57.4 95 35.8


User provided reference genes

Program Settings