Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22189 Selenicereus undatus HOM05D003620 ORTHO05D004261 1.1e-22 109.0 51 100.0
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 2.0e-16 88.2 49 77.6
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 3.4e-16 87.4 49 75.5
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 4.4e-16 87.0 49 77.6
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 7.6e-16 86.3 49 77.6
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 1.3e-15 85.5 49 79.6
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 1.7e-15 85.1 49 79.6
GSVIVG01029732001 Vitis vinifera HOM05D003620 ORTHO05D004261 1.7e-15 85.1 49 77.6
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 2.2e-15 84.7 49 77.6
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 2.2e-15 84.7 49 77.6
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 2.2e-15 84.7 49 77.6
Dinv24230 Davidia involucrata HOM05D003620 ORTHO05D004261 2.2e-15 84.7 49 75.5
Glyma.15G051100 Glycine max HOM05D003620 ORTHO05D004261 2.2e-15 84.7 50 74.0
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 2.9e-15 84.3 49 75.5
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 2.9e-15 84.3 49 77.6
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 2.9e-15 84.3 49 75.5
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 2.9e-15 84.3 49 75.5
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 2.9e-15 84.3 49 75.5
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 3.8e-15 84.0 49 77.6
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 3.8e-15 84.0 49 77.6
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 3.8e-15 84.0 49 77.6
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 3.8e-15 84.0 49 73.5
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 3.8e-15 84.0 49 73.5
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 4.9e-15 83.6 49 77.6
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 4.9e-15 83.6 49 77.6
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 6.4e-15 83.2 49 75.5
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 6.4e-15 83.2 49 77.6
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 6.4e-15 83.2 49 77.6
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 6.4e-15 83.2 49 77.6
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 6.4e-15 83.2 49 75.5
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 8.4e-15 82.8 49 75.5
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 8.4e-15 82.8 49 75.5
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 8.4e-15 82.8 49 77.6
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 8.4e-15 82.8 49 73.5
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 1.1e-14 82.4 49 75.5
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 1.1e-14 82.4 49 71.4
AUR62003395 Chenopodium quinoa HOM05D003620 ORTHO05D004261 1.1e-14 82.4 49 75.5
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 1.1e-14 82.4 49 73.5
Lj6g0009012 Lotus japonicus HOM05D003620 ORTHO05D004261 1.1e-14 82.4 49 73.5
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 1.1e-14 82.4 49 75.5
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 1.4e-14 82.0 49 75.5
C07p07770 Brassica napus HOM05D003620 ORTHO05D004261 1.4e-14 82.0 49 73.5
BolC7t41195H Brassica oleracea HOM05D003620 ORTHO05D004261 1.4e-14 82.0 49 73.5
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 1.4e-14 82.0 49 75.5
AUR62004784 Chenopodium quinoa HOM05D003620 ORTHO05D004261 1.4e-14 82.0 49 75.5
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 1.4e-14 82.0 49 73.5
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 1.9e-14 81.6 49 75.5
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.9e-14 81.6 49 75.5
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 2.4e-14 81.3 49 75.5
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 2.4e-14 81.3 49 75.5
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 2.4e-14 81.3 49 73.5
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 2.4e-14 81.3 49 71.4
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 2.4e-14 81.3 49 73.5
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 2.4e-14 81.3 49 73.5
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 3.2e-14 80.9 49 75.5
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 4.2e-14 80.5 49 75.5
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 5.4e-14 80.1 49 73.5
Oeu047368.1 Olea europaea HOM05D003620 ORTHO05D004261 5.4e-14 80.1 49 71.4
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 5.4e-14 80.1 49 71.4
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 5.4e-14 80.1 49 71.4
vmacro01806 Vaccinium macrocarpon HOM05D003620 ORTHO05D004261 5.4e-14 80.1 49 73.5
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 9.2e-14 79.3 49 67.3
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 1.2e-13 79.0 49 69.4
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 1.2e-13 79.0 49 69.4
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 1.2e-13 79.0 49 69.4
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 1.2e-13 79.0 49 69.4
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 1.6e-13 78.6 49 71.4
Rhsim11G0134200 Rhododendron simsii HOM05D003620 ORTHO05D004261 1.6e-13 78.6 49 71.4
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 2.1e-13 78.2 49 69.4
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 2.1e-13 78.2 49 71.4
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 2.1e-13 78.2 49 71.4
Cc02_g21940 Coffea canephora HOM05D003620 ORTHO05D004261 2.7e-13 77.8 49 71.4
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 2.7e-13 77.8 49 69.4
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 2.7e-13 77.8 49 69.4
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 2.7e-13 77.8 49 69.4
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 3.5e-13 77.4 49 69.4
Ciclev10000710m.g Citrus clementina HOM05D003620 ORTHO05D004261 3.5e-13 77.4 49 69.4
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 3.5e-13 77.4 49 71.4
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 4.6e-13 77.0 49 69.4
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 4.6e-13 77.0 49 69.4
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 4.6e-13 77.0 49 71.4
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 6.0e-13 76.6 49 71.4
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 7.8e-13 76.3 49 69.4
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 7.8e-13 76.3 49 69.4
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 1.0e-12 75.9 49 69.4
C09p20220 Brassica napus HOM05D003620 ORTHO05D004261 1.0e-12 75.9 47 70.2
BolC9t54929H Brassica oleracea HOM05D003620 ORTHO05D004261 1.0e-12 75.9 47 70.2
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 1.3e-12 75.5 49 71.4
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 1.3e-12 75.5 49 67.3
EL10Ac4g08941 Beta vulgaris HOM05D003620 ORTHO05D004261 1.7e-12 75.1 49 71.4
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 1.7e-12 75.1 49 65.3
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 1.7e-12 75.1 49 71.4
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 2.3e-12 74.7 49 69.4
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 2.3e-12 74.7 49 65.3
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 3.0e-12 74.3 49 63.3
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 3.0e-12 74.3 49 67.3
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 3.0e-12 74.3 49 67.3
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 3.9e-12 73.9 49 67.3
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 5.1e-12 73.6 49 65.3
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 6.6e-12 73.2 49 69.4
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 8.7e-12 72.8 49 65.3
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 1.1e-11 72.4 49 65.3
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 1.1e-11 72.4 49 65.3
Lj5C243T9 Lonicera japonica HOM05D003620 ORTHO05D004261 1.1e-11 72.4 49 67.3
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 1.1e-11 72.4 49 63.3
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 1.5e-11 72.0 49 67.3
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 1.5e-11 72.0 49 63.3
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 1.5e-11 72.0 49 61.2
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 1.9e-11 71.6 49 65.3
Migut.B00643 Erythranthe guttata HOM05D003620 ORTHO05D004261 2.5e-11 71.2 49 67.3
Os01g0959800 Oryza sativa ssp. japonica HOM05D003620 ORTHO05D004261 2.5e-11 71.2 49 63.3
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 2.5e-11 71.2 49 63.3
Mapoly0064s0044 Marchantia polymorpha HOM05D003620 ORTHO05D004261 3.3e-11 70.9 49 65.3
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 4.3e-11 70.5 49 65.3
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 4.3e-11 70.5 49 63.3
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 7.3e-11 69.7 49 63.3
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 7.3e-11 69.7 49 67.3
SalBow5G2754 Salvia bowleyana HOM05D003620 ORTHO05D004261 7.3e-11 69.7 49 67.3
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis HOM05D003620 ORTHO05D004261 9.6e-11 69.3 49 63.3
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 1.3e-10 68.9 49 63.3
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 1.3e-10 68.9 49 63.3
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 8.1e-10 66.2 44 68.2
SMO244G0007 Selaginella moellendorffii HOM05D003620 ORTHO05D004261 1.1e-09 65.9 49 59.2
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 1.1e-09 65.9 49 59.2
CBR_g4358 Chara braunii HOM05D003620 ORTHO05D004261 1.4e-09 65.5 49 61.2
Zm00001eb362570 Zea mays HOM05D003620 ORTHO05D004261 1.4e-09 65.5 49 63.3
Pp3c15_7420 Physcomitrium patens HOM05D003620 ORTHO05D004261 3.4e-08 60.8 49 61.2
BcaC04g22352 Brassica carinata HOM05D003620 ORTHO05D004261 2.4e-06 54.7 33 69.7


User provided reference genes

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