Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 2597.8 1324 100.0
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1919.4 1278 75.7
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1907.1 1272 75.7
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1870.5 1274 73.5
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1763.4 1274 70.1
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1733.8 1136 75.8
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1691.0 1258 68.1
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1688.3 1259 67.4
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1672.9 1258 67.0
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1658.3 1258 66.5
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1652.9 1268 65.9
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1646.7 1264 66.0
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1644.8 1268 65.4
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1644.4 1265 66.5
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1641.7 1273 65.0
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1639.8 1261 66.1
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1627.5 1264 65.5
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1624.8 1273 64.1
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1623.2 1267 64.5
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1622.1 1245 66.8
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1613.2 1262 64.1
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1610.1 1273 64.7
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1608.6 1266 63.6
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1608.2 1264 65.0
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1606.7 1266 63.5
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1605.5 1266 63.6
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1605.1 1266 63.4
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1605.1 1264 64.2
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1602.0 1267 65.0
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1598.9 1266 63.4
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1598.2 1270 63.5
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1595.9 1265 63.2
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1592.0 1258 63.8
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1590.9 1242 65.4
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1590.9 1274 63.9
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1589.7 1256 64.6
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1588.2 1255 64.5
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1585.1 1244 63.7
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1582.8 1253 64.2
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1582.0 1264 63.8
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1581.6 1254 64.4
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1581.2 1270 63.4
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1577.0 1253 64.0
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1569.3 1242 64.4
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1567.0 1275 62.7
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1565.4 1264 62.2
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1557.3 1276 62.6
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1556.2 1251 64.0
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1553.5 1257 62.6
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1550.8 1271 62.2
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1549.3 1276 61.8
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1546.9 1263 62.3
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1545.8 1263 62.0
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1542.7 1271 61.9
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1534.2 1274 62.0
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1532.7 1254 61.7
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1527.7 1272 60.9
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1519.6 1267 61.9
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1515.7 1271 60.9
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1515.4 1264 61.2
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1508.8 1266 61.3
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1507.7 1270 59.9
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1501.1 1274 60.2
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1488.4 1257 60.5
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1487.6 1278 60.3
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1469.5 1274 59.9
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1466.8 1259 60.5
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1466.1 1255 60.2
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1461.8 1251 60.1
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1450.3 1096 67.3
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1442.9 1253 59.3
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1439.5 1260 58.9
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1434.1 1275 58.6
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1434.1 1266 58.5
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1420.2 1099 65.5
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1419.1 1273 58.1
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1417.9 1270 58.1
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1416.0 1267 58.1
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1412.1 1301 57.0
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1408.3 1275 57.9
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1406.0 1269 57.5
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1406.0 1269 57.5
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1403.7 1264 57.9
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1400.6 1228 60.7
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1390.2 1278 55.8
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1379.0 1132 61.8
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1351.7 1109 60.9
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1333.9 1093 61.3
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1330.5 1262 55.7
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1323.9 1265 53.5
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1307.7 1501 48.5
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1302.3 1163 58.6
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1247.3 1273 51.9
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1228.4 1253 52.4
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1218.0 1260 53.6
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1159.4 879 65.4
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1116.7 865 65.2
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1113.2 1253 50.8
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1104.4 1204 49.8
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 7.6e-301 1037.7 755 69.3
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 5.4e-299 1031.6 848 61.1
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 4.4e-256 889.0 1293 40.1
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 5.5e-235 818.9 1174 41.0
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 1.4e-230 804.3 1164 40.9
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 2.1e-226 790.4 1250 39.5
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 3.4e-216 756.5 802 52.4
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 2.4e-214 750.4 787 49.6
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.2e-160 572.0 1503 30.5
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 5.0e-135 486.9 461 56.2
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 2.2e-130 471.5 358 68.7
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 5.7e-115 420.2 305 65.9
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 5.1e-87 327.4 1364 26.5
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 7.6e-83 313.5 1535 24.9
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 1.8e-76 292.4 275 52.4
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.3e-66 259.6 196 69.4
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 1.9e-65 255.8 251 56.2
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 9.0e-60 236.9 1264 25.3
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 9.9e-59 233.4 302 44.0
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.1e-52 213.4 167 67.7
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 2.1e-48 199.1 1343 25.9
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 8.5e-42 177.2 136 67.6
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 4.2e-41 174.9 137 73.0
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 9.7e-38 163.7 201 44.8
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 2.2e-37 162.5 126 67.5
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 1.5e-35 156.4 230 40.0
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 4.1e-28 131.7 295 38.0


User provided reference genes

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