Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17657 Selenicereus undatus HOM05D001008 ORTHO05D009098 1.8e-78 295.8 149 100.0
EL10Ac8g19545 Beta vulgaris HOM05D001008 ORTHO05D009098 4.4e-64 248.1 145 82.8
AUR62002682 Chenopodium quinoa HOM05D001008 ORTHO05D009098 2.4e-62 242.3 145 82.1
AUR62030139 Chenopodium quinoa HOM05D001008 ORTHO05D009098 4.1e-62 241.5 145 81.4
Dinv16828 Davidia involucrata HOM05D001008 ORTHO05D009098 1.3e-60 236.5 145 79.3
Lj2A329T54 Lonicera japonica HOM05D001008 ORTHO05D009098 2.3e-60 235.7 145 78.6
TAR627G0015 Trochodendron aralioides HOM05D001008 ORTHO05D009098 2.3e-60 235.7 146 77.4
COL.COLO4_26854 Corchorus olitorius HOM05D001008 ORTHO05D009098 3.8e-60 235.0 147 76.9
Aa31LG6G3000 Aethionema arabicum HOM05D001008 ORTHO05D009098 5.0e-60 234.6 145 77.2
GSVIVG01021668001 Vitis vinifera HOM05D001008 ORTHO05D009098 8.6e-60 233.8 145 78.6
PGR083G1201 Punica granatum HOM05D000251 ORTHO05D000414 1.1e-59 233.4 145 80.7
Gohir.D02G105500 Gossypium hirsutum HOM05D001008 ORTHO05D009098 1.9e-59 232.6 145 77.2
Gorai.005G119700 Gossypium raimondii HOM05D001008 ORTHO05D009098 1.9e-59 232.6 145 77.2
RcHm_v2.0_Chr5g0016441 Rosa chinensis HOM05D001008 ORTHO05D009098 2.5e-59 232.3 145 75.2
Atru.chr10.805 Acer truncatum HOM05D001008 ORTHO05D009098 3.3e-59 231.9 145 76.6
Duzib235G1260 Durio zibethinus HOM05D001008 ORTHO05D009098 3.3e-59 231.9 145 75.9
Hma1.2p1_0067F.1_g036870 Hydrangea macrophylla HOM05D001008 ORTHO05D009098 3.3e-59 231.9 145 76.6
arahy.Tifrunner.gnm1.ann1.3P38HT Arachis hypogaea HOM05D001008 ORTHO05D009098 5.6e-59 231.1 145 75.9
MD05G1271700 Malus domestica HOM05D001008 ORTHO05D009098 7.3e-59 230.7 146 76.0
AL7G33220 Arabidopsis lyrata HOM05D001008 ORTHO05D009098 9.5e-59 230.3 145 76.6
AT4G20930 Arabidopsis thaliana HOM05D001008 ORTHO05D009098 9.5e-59 230.3 145 76.6
BcaB03g11709 Brassica carinata HOM05D001008 ORTHO05D009098 1.2e-58 229.9 145 76.6
BcaC01g00729 Brassica carinata HOM05D001008 ORTHO05D009098 1.2e-58 229.9 145 76.6
arahy.Tifrunner.gnm1.ann1.J24SNI Arachis hypogaea HOM05D001008 ORTHO05D009098 1.6e-58 229.6 145 75.2
Carub.0007s2050 Capsella rubella HOM05D001008 ORTHO05D009098 2.1e-58 229.2 145 75.9
Eucgr.D00129 Eucalyptus grandis HOM05D001008 ORTHO05D009098 2.1e-58 229.2 145 77.2
Nitab4.5_0000076g0220 Nicotiana tabacum HOM05D001008 ORTHO05D009098 2.1e-58 229.2 145 78.6
Ciclev10015754m.g Citrus clementina HOM05D001008 ORTHO05D009098 4.7e-58 228.0 145 75.2
Thhalv10025955m.g Eutrema salsugineum HOM05D001008 ORTHO05D009098 4.7e-58 228.0 145 75.9
A08p15410 Brassica napus HOM05D001008 ORTHO05D009098 1.0e-57 226.9 145 75.2
C03p83680 Brassica napus HOM05D001008 ORTHO05D009098 1.0e-57 226.9 145 75.2
BraA08t33519Z Brassica rapa HOM05D001008 ORTHO05D009098 1.0e-57 226.9 145 75.2
Peaxi162Scf00395g00411 Petunia axillaris HOM05D001008 ORTHO05D009098 1.4e-57 226.5 145 76.6
Potri.001G465600 Populus trichocarpa HOM05D001008 ORTHO05D009098 1.8e-57 226.1 145 74.5
Sabra16G0316000 Salix brachista HOM05D001008 ORTHO05D009098 1.8e-57 226.1 145 75.2
Solyc02g022930.3 Solanum lycopersicum HOM05D001008 ORTHO05D009098 3.0e-57 225.3 145 76.6
Sopen02g006560 Solanum pennellii HOM05D001008 ORTHO05D009098 3.0e-57 225.3 145 76.6
BolC3t20647H Brassica oleracea HOM05D001008 ORTHO05D009098 4.0e-57 224.9 145 74.5
CARHR227490 Cardamine hirsuta HOM05D001008 ORTHO05D009098 4.0e-57 224.9 145 73.8
Sp7g19010 Schrenkiella parvula HOM05D001008 ORTHO05D009098 4.0e-57 224.9 145 75.2
Lalb_Chr20g0120101 Lupinus albus HOM05D001008 ORTHO05D009098 5.2e-57 224.6 148 70.9
BcaC01g00736 Brassica carinata HOM05D001008 ORTHO05D009098 6.8e-57 224.2 145 74.5
Cpa.g.sc166.37 Carica papaya HOM05D001008 ORTHO05D009098 6.8e-57 224.2 145 72.4
THA.LOC104806251 Tarenaya hassleriana HOM05D001008 ORTHO05D009098 6.8e-57 224.2 146 71.9
Cc09_g07820 Coffea canephora HOM05D001008 ORTHO05D009098 1.2e-56 223.4 145 73.1
MSTRG.16297 Avicennia marina HOM05D001008 ORTHO05D009098 1.5e-56 223.0 145 71.7
CAN.G23.10 Capsicum annuum HOM05D001008 ORTHO05D009098 1.5e-56 223.0 145 75.2
CiPaw.09G142300 Carya illinoinensis HOM05D001008 ORTHO05D009098 1.5e-56 223.0 145 75.2
PSO541G4496 Papaver somniferum HOM05D001008 ORTHO05D009098 1.5e-56 223.0 145 72.4
PSO675G1263 Papaver somniferum HOM05D001008 ORTHO05D009098 2.6e-56 222.2 145 72.4
SalBow8G1627 Salvia bowleyana HOM05D001008 ORTHO05D009098 9.8e-56 220.3 145 73.1
MBI18_g28228_MAGBIO Magnolia biondii HOM05D001008 ORTHO05D009098 1.3e-55 219.9 147 70.1
Sed0010622 Sechium edule HOM05D001008 ORTHO05D009098 1.7e-55 219.5 145 73.1
vmacro03375 Vaccinium macrocarpon HOM05D001008 ORTHO05D009098 1.7e-55 219.5 156 68.6
Actinidia33687 Actinidia chinensis HOM05D001008 ORTHO05D009098 2.2e-55 219.2 145 72.4
Phvul.006G127500 Phaseolus vulgaris HOM05D001008 ORTHO05D009098 2.2e-55 219.2 148 70.3
unitig_32.g11680 Utricularia gibba HOM05D001008 ORTHO05D009098 2.2e-55 219.2 147 72.8
Migut.M01903 Erythranthe guttata HOM05D001008 ORTHO05D009098 2.9e-55 218.8 145 71.0
DCAR_007835 Daucus carota HOM05D001008 ORTHO05D009098 6.4e-55 217.6 145 71.7
HanXRQChr09g0259921 Helianthus annuus HOM05D001008 ORTHO05D009098 6.4e-55 217.6 145 72.4
Nn3g20168 Nelumbo nucifera HOM05D001008 ORTHO05D009098 6.4e-55 217.6 145 73.1
Ca_00850_v3 Cicer arietinum L. HOM05D001008 ORTHO05D009098 8.3e-55 217.2 145 71.0
ECA248G1201 Erigeron canadensis HOM05D001008 ORTHO05D009098 8.3e-55 217.2 140 74.3
CsaV3_1G037300 Cucumis sativus L. HOM05D001008 ORTHO05D009098 1.4e-54 216.5 145 70.3
ClCG03G006140 Citrullus lanatus HOM05D001008 ORTHO05D009098 1.8e-54 216.1 145 70.3
Glyma.15G131200 Glycine max HOM05D001008 ORTHO05D009098 1.8e-54 216.1 145 70.3
Lj6g0017297 Lotus japonicus HOM05D001008 ORTHO05D009098 1.8e-54 216.1 145 70.3
Glyma.09G025100 Glycine max HOM05D001008 ORTHO05D009098 3.2e-54 215.3 145 70.3
Manes.14G124021 Manihot esculenta HOM05D001008 ORTHO05D009098 4.1e-54 214.9 145 71.7
VMungo0540G1033 Vigna mungo HOM05D001008 ORTHO05D009098 5.4e-54 214.5 145 70.3
Aqoxy1G01588 Aquilegia oxysepala HOM05D001008 ORTHO05D009098 9.2e-54 213.8 145 70.3
ATR1098G042 Amborella trichopoda HOM05D001008 ORTHO05D009098 1.6e-53 213.0 146 71.2
Medtr2g030400 Medicago truncatula HOM05D001008 ORTHO05D009098 1.6e-53 213.0 145 69.0
TPR.G26338 Trifolium pratense HOM05D001008 ORTHO05D009098 4.6e-53 211.5 145 67.6
Prupe.4G091300 Prunus persica HOM05D001008 ORTHO05D009098 6.0e-53 211.1 130 78.5
Zm00001eb224720 Zea mays HOM05D001008 ORTHO05D009098 6.6e-52 207.6 145 69.7
CDE02G1783 Ceratophyllum demersum HOM05D001008 ORTHO05D009098 1.9e-51 206.1 146 68.5
Eucgr.D00258 Eucalyptus grandis HOM05D001008 ORTHO05D009098 4.3e-51 204.9 145 71.0
Thecc.06G004300 Theobroma cacao HOM05D001008 ORTHO05D009098 6.2e-50 201.1 129 76.0
QL05p062602 Quercus lobata HOM05D001008 ORTHO05D009098 3.1e-49 198.7 129 76.7
CSS0050006 Camellia sinensis var. sinensis HOM05D001008 ORTHO05D009098 3.4e-48 195.3 129 73.6
Nitab4.5_0004204g0040 Nicotiana tabacum HOM05D001008 ORTHO05D009098 2.7e-45 185.7 145 67.6
SGA_v2.0_scaffold1G00273 Striga asiatica HOM05D000033 ORTHO05D001614 1.0e-44 183.7 145 65.5
Pp3c3_17080 Physcomitrium patens HOM05D001008 ORTHO05D009098 3.0e-44 182.2 147 59.2
Haze_05846 Corylus avellana HOM05D001008 ORTHO05D009098 8.6e-44 180.6 118 77.1
HPP92_028174 Vanilla planifolia HOM05D001008 ORTHO05D009098 1.1e-43 180.3 144 62.5
Mapoly0028s0140 Marchantia polymorpha HOM05D001008 ORTHO05D009098 1.9e-43 179.5 140 59.3
Sc17g0004600 Simmondsia chinensis HOM05D001008 ORTHO05D009098 2.5e-43 179.1 118 76.3
FAN21G3707 Fragaria x ananassa HOM05D002312 ORTHO05D001614 5.6e-43 177.9 109 77.1
MELO3C002813.2 Cucumis melo HOM05D001008 ORTHO05D009098 8.1e-42 174.1 113 73.5
Lsat_1_v5_gn_5_159560 Lactuca sativa HOM05D001008 ORTHO05D009098 1.8e-41 172.9 118 72.0
FAN25G1843 Fragaria x ananassa HOM05D002312 ORTHO05D001614 2.3e-41 172.6 109 75.2
MBI18_g37149_MAGBIO Magnolia biondii HOM05D001008 ORTHO05D009098 1.1e-38 163.7 145 57.9
FvH4_3g10220 Fragaria vesca HOM05D001008 ORTHO05D009098 1.6e-37 159.8 91 82.4
CSS0020227 Camellia sinensis var. sinensis HOM05D001008 ORTHO05D009098 2.7e-37 159.1 125 65.6
FAN11G2615 Fragaria x ananassa HOM05D002312 ORTHO05D001614 1.6e-34 149.8 93 77.4
FAN16G1118 Fragaria x ananassa HOM05D002312 ORTHO05D001614 2.1e-34 149.4 93 78.5
Hma1.2p1_0067F.1_g036880 Hydrangea macrophylla HOM05D001008 ORTHO05D009098 2.3e-28 129.4 75 82.7
AagrBONN_evm.TU.Sc2ySwM_344.3223 Anthoceros agrestis HOM05D001008 ORTHO05D009098 1.5e-27 126.7 91 65.9
HPP92_026301 Vanilla planifolia HOM05D001008 ORTHO05D009098 1.5e-27 126.7 75 77.3
Haze_26700 Corylus avellana HOM05D001008 ORTHO05D009098 9.0e-25 117.5 145 44.8
PRCOL_00002051 Prasinoderma coloniale HOM05D001008 ORTHO05D009098 2.9e-23 112.5 134 41.8
Haze_27311 Corylus avellana HOM05D001008 ORTHO05D009098 8.4e-23 110.9 149 40.9
Cre14.g630859 Chlamydomonas reinhardtii HOM05D001008 ORTHO05D009098 3.9e-20 102.1 141 35.5
arahy.Tifrunner.gnm1.ann1.1AJ3D1 Arachis hypogaea HOM05D001008 ORTHO05D009098 4.8e-18 95.1 91 53.8
Gohir.A03G085101 Gossypium hirsutum HOM05D001008 ORTHO05D009098 2.0e-16 89.7 59 78.0
Cfa024516 Carpinus fangiana HOM05D001008 ORTHO05D009098 4.3e-11 72.0 149 31.5
Pp3s34_681 Physcomitrium patens HOM05D001008 ORTHO05D003293 4.8e-10 68.6 128 33.6
Haze_27291 Corylus avellana HOM05D001008 ORTHO05D003293 2.4e-06 56.2 125 29.6


User provided reference genes

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