Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 1.7e-134 482.6 238 100.0
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 7.0e-96 354.4 229 79.0
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 3.8e-94 348.6 242 74.8
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 2.5e-93 345.9 224 78.1
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 2.3e-91 339.3 226 75.7
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 2.8e-89 332.4 226 74.3
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 2.5e-85 319.3 221 71.9
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 7.2e-85 317.8 223 71.3
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 7.2e-85 317.8 225 68.9
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 6.1e-84 314.7 227 69.2
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 3.0e-83 312.4 229 66.8
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 4.0e-83 312.0 242 64.5
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 4.0e-83 312.0 242 65.3
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.2e-82 310.5 242 64.0
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 3.3e-82 308.9 244 65.6
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 4.4e-82 308.5 235 68.1
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 4.4e-82 308.5 228 68.0
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 4.4e-82 308.5 224 67.4
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 5.7e-82 308.1 221 69.2
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 5.7e-82 308.1 245 64.9
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 7.5e-82 307.8 225 68.9
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 2.8e-81 305.8 235 66.4
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 2.8e-81 305.8 224 67.9
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 2.8e-81 305.8 228 67.5
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 3.7e-81 305.4 226 67.7
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 8.2e-81 304.3 225 66.7
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 8.2e-81 304.3 221 68.3
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 1.8e-80 303.1 221 64.7
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 4.1e-80 302.0 224 67.4
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 2.0e-79 299.7 230 65.2
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 2.0e-79 299.7 230 65.2
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 2.7e-79 299.3 225 64.9
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 5.9e-79 298.1 229 65.1
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 1.7e-78 296.6 223 65.9
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 2.2e-78 296.2 223 65.9
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 3.8e-78 295.4 227 63.0
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 5.0e-78 295.0 221 67.0
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 5.0e-78 295.0 226 66.4
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 8.5e-78 294.3 239 62.3
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 1.9e-77 293.1 240 61.7
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 1.9e-77 293.1 229 64.6
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 3.2e-77 292.4 222 65.8
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 4.2e-77 292.0 239 61.9
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.2e-76 290.4 224 64.7
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.6e-76 290.0 238 61.3
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 2.7e-76 289.3 227 62.1
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 2.7e-76 289.3 226 64.2
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 8.0e-76 287.7 226 64.6
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 1.0e-75 287.3 237 62.0
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 1.8e-75 286.6 223 64.6
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 2.3e-75 286.2 226 62.8
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 3.0e-75 285.8 249 61.0
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 3.0e-75 285.8 240 60.8
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.2e-74 283.9 235 64.7
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 4.4e-74 282.0 210 69.5
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 5.7e-74 281.6 226 63.7
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 2.8e-73 279.3 217 64.5
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 3.7e-73 278.9 227 62.1
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 3.7e-73 278.9 224 62.1
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 3.7e-73 278.9 259 59.5
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 4.8e-73 278.5 224 63.4
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 1.1e-72 277.3 220 64.5
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 1.4e-72 276.9 228 61.0
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 1.8e-72 276.6 225 60.4
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 2.4e-72 276.2 226 61.5
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 4.1e-72 275.4 238 58.8
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 5.4e-72 275.0 228 59.6
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 5.4e-72 275.0 226 61.5
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 7.0e-72 274.6 239 57.3
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 1.6e-71 273.5 238 58.4
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 2.0e-71 273.1 228 61.0
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 2.0e-71 273.1 235 60.9
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 2.7e-71 272.7 227 60.4
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 7.7e-71 271.2 218 64.7
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 7.7e-71 271.2 224 62.5
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 3.8e-70 268.9 228 60.5
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 5.0e-70 268.5 228 60.5
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 2.5e-69 266.2 223 62.3
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 9.5e-69 264.2 274 52.6
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 9.5e-69 264.2 224 58.9
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 3.0e-67 259.2 220 60.5
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.2e-65 253.1 249 54.2
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 4.9e-65 251.9 208 61.5
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 9.2e-64 247.7 240 54.2
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 2.0e-63 246.5 240 54.2
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 2.0e-63 246.5 233 57.9
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 7.8e-63 244.6 225 60.0
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 7.8e-63 244.6 214 60.7
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 1.3e-62 243.8 221 57.0
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 1.7e-62 243.4 181 63.0
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 8.6e-62 241.1 228 58.3
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 1.6e-60 236.9 260 54.2
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 3.6e-60 235.7 216 57.4
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 3.6e-60 235.7 216 57.4
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 6.8e-59 231.5 194 59.3
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 8.9e-59 231.1 220 56.8
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 3.7e-57 225.7 207 58.0
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 2.4e-56 223.0 181 62.4
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.4e-56 223.0 247 51.0
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 5.4e-56 221.9 283 49.8
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 2.7e-55 219.5 185 60.0
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 1.6e-52 210.3 182 56.6
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 5.2e-51 205.3 159 67.3
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 6.8e-51 204.9 157 62.4
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 9.8e-50 201.1 148 64.2
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 1.7e-46 190.3 219 49.8
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 2.3e-46 189.9 239 49.4
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 1.2e-44 184.1 165 60.6
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 3.1e-43 179.5 134 63.4
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 1.6e-39 167.2 170 52.9
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 1.3e-38 164.1 130 63.8
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 3.0e-38 162.9 118 66.1
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 5.2e-35 152.1 116 66.4
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 1.9e-32 143.7 146 51.4
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 1.1e-29 134.4 217 35.0
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 1.9e-29 133.7 131 56.5
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 3.4e-26 122.9 222 31.5
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 5.6e-21 105.5 100 52.0
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 4.0e-19 99.4 79 59.5
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-13 81.3 65 58.5
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 7.1e-08 62.0 43 62.8
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 2.7e-07 60.1 87 42.5


User provided reference genes

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