Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16683 Selenicereus undatus HOM05D004276 ORTHO05D005126 2.2e-131 472.2 232 100.0
Sc23g0002430 Simmondsia chinensis HOM05D004276 ORTHO05D005126 4.9e-78 295.0 149 95.3
EL10Ac1g00335 Beta vulgaris HOM05D004276 ORTHO05D005126 8.3e-78 294.3 149 95.3
Rhsim01G0168500 Rhododendron simsii HOM05D004276 ORTHO05D005126 5.4e-77 291.6 149 94.0
Rhsim11G0144600 Rhododendron simsii HOM05D004276 ORTHO05D005126 5.4e-77 291.6 149 94.0
Actinidia20176 Actinidia chinensis HOM05D004276 ORTHO05D005126 7.0e-77 291.2 149 94.0
CSS0045220 Camellia sinensis var. sinensis HOM05D004276 ORTHO05D005126 9.2e-77 290.8 149 94.0
Dinv32536 Davidia involucrata HOM05D004276 ORTHO05D005126 3.5e-76 288.9 150 92.7
HanXRQChr17g0562231 Helianthus annuus HOM05D004276 ORTHO05D005126 6.0e-76 288.1 149 92.6
CAN.G1143.25 Capsicum annuum HOM05D004276 ORTHO05D005126 7.8e-76 287.7 149 91.9
ECA234G2670 Erigeron canadensis HOM05D004276 ORTHO05D005126 5.0e-75 285.0 149 91.3
Nn5g30298 Nelumbo nucifera HOM05D004276 ORTHO05D005126 8.6e-75 284.3 149 91.9
Nitab4.5_0000305g0280 Nicotiana tabacum HOM05D004276 ORTHO05D005126 8.6e-75 284.3 149 91.3
AUR62022636 Chenopodium quinoa HOM05D004276 ORTHO05D005126 1.1e-74 283.9 149 91.9
Lj9C594T5 Lonicera japonica HOM05D004276 ORTHO05D005126 1.1e-74 283.9 149 91.3
ClCG10G016120 Citrullus lanatus HOM05D004276 ORTHO05D005126 1.5e-74 283.5 149 90.6
CsaV3_3G040290 Cucumis sativus L. HOM05D004276 ORTHO05D005126 1.5e-74 283.5 149 90.6
Cc02_g38790 Coffea canephora HOM05D004276 ORTHO05D005126 2.5e-74 282.7 149 90.6
Solyc03g121130.3 Solanum lycopersicum HOM05D004276 ORTHO05D005126 2.5e-74 282.7 149 91.3
Sopen03g039960 Solanum pennellii HOM05D004276 ORTHO05D005126 2.5e-74 282.7 149 91.3
PGSC0003DMG402002606 Solanum tuberosum HOM05D004276 ORTHO05D005126 2.5e-74 282.7 149 91.3
Peaxi162Scf01254g00021 Petunia axillaris HOM05D004276 ORTHO05D005126 4.3e-74 282.0 149 91.3
DCAR_017055 Daucus carota HOM05D004276 ORTHO05D005126 9.5e-74 280.8 149 89.3
CDE11G0794 Ceratophyllum demersum HOM05D004276 ORTHO05D005126 2.1e-73 279.6 149 90.6
Prupe.2G181300 Prunus persica HOM05D004276 ORTHO05D005126 2.1e-73 279.6 149 89.9
RcHm_v2.0_Chr1g0358391 Rosa chinensis HOM05D004276 ORTHO05D005126 2.1e-73 279.6 149 90.6
AUR62004429 Chenopodium quinoa HOM05D004276 ORTHO05D005126 2.8e-73 279.3 149 90.6
FAN10G4166 Fragaria x ananassa HOM05D004276 ORTHO05D005126 2.8e-73 279.3 150 90.0
FAN01G1870 Fragaria x ananassa HOM05D004276 ORTHO05D005126 3.6e-73 278.9 149 90.6
FAN10G0892 Fragaria x ananassa HOM05D004276 ORTHO05D005126 3.6e-73 278.9 149 90.6
MBI06_g29321_MAGBIO Magnolia biondii HOM05D004276 ORTHO05D005126 3.6e-73 278.9 149 89.9
Aqoxy7G00185 Aquilegia oxysepala HOM05D004276 ORTHO05D005126 4.7e-73 278.5 149 89.3
Potri.014G092600 Populus trichocarpa HOM05D004276 ORTHO05D005126 6.2e-73 278.1 149 88.6
MSTRG.17308 Avicennia marina HOM05D004276 ORTHO05D005126 8.1e-73 277.7 149 89.3
CDE05G0403 Ceratophyllum demersum HOM05D004276 ORTHO05D005126 8.1e-73 277.7 149 89.9
Migut.N01579 Erythranthe guttata HOM05D004276 ORTHO05D005126 8.1e-73 277.7 149 89.9
Eucgr.E00082 Eucalyptus grandis HOM05D004276 ORTHO05D005126 1.4e-72 276.9 149 88.6
FvH4_7g15670 Fragaria vesca HOM05D004276 ORTHO05D005126 1.4e-72 276.9 149 89.3
TWI59G1141 Tripterygium wilfordii HOM05D004276 ORTHO05D005126 1.4e-72 276.9 149 89.3
Lsat_1_v5_gn_4_34121 Lactuca sativa HOM05D004276 ORTHO05D005126 1.8e-72 276.6 149 89.9
Oeu004920.1 Olea europaea HOM05D004276 ORTHO05D005126 1.8e-72 276.6 149 89.9
MD01G1073500 Malus domestica HOM05D004276 ORTHO05D005126 3.1e-72 275.8 149 89.9
TWI14G0490 Tripterygium wilfordii HOM05D004276 ORTHO05D005126 3.1e-72 275.8 149 89.3
TAR375G0154 Trochodendron aralioides HOM05D004276 ORTHO05D005126 4.0e-72 275.4 149 88.6
Manes.11G086700 Manihot esculenta HOM05D004276 ORTHO05D005126 5.2e-72 275.0 149 87.2
Potri.002G166200 Populus trichocarpa HOM05D004276 ORTHO05D005126 5.2e-72 275.0 149 87.2
Thecc.01G349900 Theobroma cacao HOM05D004276 ORTHO05D005126 5.2e-72 275.0 149 88.6
GSVIVG01026915001 Vitis vinifera HOM05D004276 ORTHO05D005126 5.2e-72 275.0 149 90.6
GSVIVG01027024001 Vitis vinifera HOM05D004276 ORTHO05D005126 5.2e-72 275.0 149 90.6
Glyma.12G191100 Glycine max HOM05D004276 ORTHO05D005126 6.8e-72 274.6 149 88.6
Glyma.13G310600 Glycine max HOM05D004276 ORTHO05D005126 6.8e-72 274.6 149 88.6
TAR374G1118 Trochodendron aralioides HOM05D004276 ORTHO05D005126 6.8e-72 274.6 149 87.9
Duzib133G1515 Durio zibethinus HOM05D004276 ORTHO05D005126 8.9e-72 274.2 149 87.9
Lj1g0009566 Lotus japonicus HOM05D004276 ORTHO05D005126 1.2e-71 273.9 149 88.6
PSO384G3706 Papaver somniferum HOM05D004276 ORTHO05D005126 1.2e-71 273.9 149 87.2
CANSAT78G1628 Cannabis sativa HOM05D004276 ORTHO05D005126 1.5e-71 273.5 149 89.3
PSO135G0697 Papaver somniferum HOM05D004276 ORTHO05D005126 2.0e-71 273.1 149 85.9
PSO210G0614 Papaver somniferum HOM05D004276 ORTHO05D005126 2.0e-71 273.1 149 85.9
unitig_736.g22824 Utricularia gibba HOM05D004276 ORTHO05D005126 2.0e-71 273.1 149 87.2
Migut.B01814 Erythranthe guttata HOM05D004276 ORTHO05D005126 2.6e-71 272.7 149 87.9
Lj3g0009308 Lotus japonicus HOM05D004276 ORTHO05D005126 2.6e-71 272.7 149 87.9
Duzib138G1911 Durio zibethinus HOM05D004276 ORTHO05D005126 4.4e-71 271.9 149 87.9
FAN06G0043 Fragaria x ananassa HOM05D004276 ORTHO05D005126 4.4e-71 271.9 151 88.1
FAN06G3034 Fragaria x ananassa HOM05D004276 ORTHO05D005126 4.4e-71 271.9 151 88.1
HPP92_002823 Vanilla planifolia HOM05D004276 ORTHO05D005126 4.4e-71 271.9 149 86.6
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 5.8e-71 271.6 148 87.2
Ciclev10022345m.g Citrus clementina HOM05D004276 ORTHO05D005126 5.8e-71 271.6 149 85.9
Phvul.005G117100 Phaseolus vulgaris HOM05D004276 ORTHO05D005126 5.8e-71 271.6 149 87.2
PGR031G2222 Punica granatum HOM05D004276 ORTHO05D005126 5.8e-71 271.6 149 86.6
Ca_25855_v3 Cicer arietinum L. HOM05D004276 ORTHO05D005126 7.5e-71 271.2 149 88.6
PSO302G0143 Papaver somniferum HOM05D004276 ORTHO05D005126 7.5e-71 271.2 149 85.9
Atru.chr5.606 Acer truncatum HOM05D004276 ORTHO05D005126 9.9e-71 270.8 149 85.9
Cpa.g.sc184.11 Carica papaya HOM05D004276 ORTHO05D005126 9.9e-71 270.8 149 87.9
Ca_09481_v3 Cicer arietinum L. HOM05D004276 ORTHO05D005126 1.7e-70 270.0 149 87.9
Sed0018576 Sechium edule HOM05D004276 ORTHO05D005126 1.7e-70 270.0 149 87.9
CiPaw.01G069700 Carya illinoinensis HOM05D004276 ORTHO05D005126 2.2e-70 269.6 149 86.6
Lalb_Chr04g0261801 Lupinus albus HOM05D004276 ORTHO05D005126 2.9e-70 269.2 149 85.9
Sabra14G0067200 Salix brachista HOM05D004276 ORTHO05D005126 3.7e-70 268.9 160 81.9
Gorai.007G104500 Gossypium raimondii HOM05D004276 ORTHO05D005126 4.9e-70 268.5 149 86.6
Gohir.A11G093300 Gossypium hirsutum HOM05D004276 ORTHO05D005126 6.4e-70 268.1 149 85.9
VMungo1080G0287 Vigna mungo HOM05D004276 ORTHO05D005126 6.4e-70 268.1 149 85.9
Gohir.D11G098300 Gossypium hirsutum HOM05D004276 ORTHO05D005126 1.9e-69 266.5 149 85.9
Medtr7g116720 Medicago truncatula HOM05D004276 ORTHO05D005126 1.9e-69 266.5 149 86.6
QL04p058903 Quercus lobata HOM05D004276 ORTHO05D005126 1.9e-69 266.5 149 85.9
QL06p021685 Quercus lobata HOM05D004276 ORTHO05D005126 1.9e-69 266.5 149 85.9
Cfa003820 Carpinus fangiana HOM05D004276 ORTHO05D005126 2.4e-69 266.2 149 85.9
Ah.05g180030 Amaranthus hybridus HOM05D004276 ORTHO05D005126 3.2e-69 265.8 190 71.1
COL.COLO4_06361 Corchorus olitorius HOM05D004276 ORTHO05D005126 7.1e-69 264.6 149 85.2
Psat3g005280 Pisum sativum HOM05D004276 ORTHO05D005126 9.2e-69 264.2 149 86.6
THA.LOC104802050 Tarenaya hassleriana HOM05D004276 ORTHO05D005126 9.2e-69 264.2 149 85.2
arahy.Tifrunner.gnm1.ann1.BP50A3 Arachis hypogaea HOM05D004276 ORTHO05D005126 1.6e-68 263.5 149 84.6
SEGI_17768 Sequoiadendron giganteum HOM05D004276 ORTHO05D005126 2.1e-68 263.1 149 83.9
Medtr6g086290 Medicago truncatula HOM05D004276 ORTHO05D005126 2.7e-68 262.7 149 84.6
TPR.G4704 Trifolium pratense HOM05D004276 ORTHO05D005126 3.5e-68 262.3 148 85.8
arahy.Tifrunner.gnm1.ann1.X3APAR Arachis hypogaea HOM05D004276 ORTHO05D005126 4.6e-68 261.9 149 83.9
arahy.Tifrunner.gnm1.ann1.K2BJ17 Arachis hypogaea HOM05D004276 ORTHO05D005126 7.8e-68 261.2 149 83.9
Os06g0158600 Oryza sativa ssp. japonica HOM05D004276 ORTHO05D005126 7.8e-68 261.2 150 83.3
HPP92_002881 Vanilla planifolia HOM05D004276 ORTHO05D005126 1.0e-67 260.8 149 84.6
Zm00001eb376330 Zea mays HOM05D004276 ORTHO05D005126 3.0e-67 259.2 150 83.3
arahy.Tifrunner.gnm1.ann1.4FI6MM Arachis hypogaea HOM05D004276 ORTHO05D005126 3.9e-67 258.8 149 83.2
Zm00001eb376230 Zea mays HOM05D004276 ORTHO05D005126 5.1e-67 258.5 150 83.3
Zm00001eb376300 Zea mays HOM05D004276 ORTHO05D005126 5.1e-67 258.5 150 83.3
HPP92_002892 Vanilla planifolia HOM05D004276 ORTHO05D005126 8.6e-67 257.7 149 83.9
Zm00001eb376200 Zea mays HOM05D004276 ORTHO05D005126 1.9e-66 256.5 151 82.1
Zm00001eb376270 Zea mays HOM05D004276 ORTHO05D005126 3.3e-66 255.8 151 82.1
Pp3c7_15560 Physcomitrium patens HOM05D004276 ORTHO05D005126 1.6e-65 253.4 149 81.2
AL1G39200 Arabidopsis lyrata HOM05D004276 ORTHO05D005126 2.8e-65 252.7 149 82.6
Oeu048599.1 Olea europaea HOM05D004276 ORTHO05D005126 4.7e-65 251.9 137 89.8
Actinidia10089 Actinidia chinensis HOM05D004276 ORTHO05D005126 2.4e-64 249.6 131 92.4
Aa31LG1G27620 Aethionema arabicum HOM05D004276 ORTHO05D005126 2.4e-64 249.6 149 81.9
Carub.0004s2893 Capsella rubella HOM05D004276 ORTHO05D005126 3.1e-64 249.2 149 81.2
Pp3c11_12810 Physcomitrium patens HOM05D004276 ORTHO05D005126 4.0e-64 248.8 149 79.2
AL4G45500 Arabidopsis lyrata HOM05D004276 ORTHO05D005126 5.2e-64 248.4 149 80.5
CARHR025440 Cardamine hirsuta HOM05D004276 ORTHO05D005126 5.2e-64 248.4 149 81.2
Sp4g28280 Schrenkiella parvula HOM05D004276 ORTHO05D005126 1.2e-63 247.3 149 80.5
AT2G46230 Arabidopsis thaliana HOM05D004276 ORTHO05D005126 2.0e-63 246.5 149 80.5
Thhalv10001643m.g Eutrema salsugineum HOM05D004276 ORTHO05D005126 2.0e-63 246.5 149 79.9
MELO3C009766.2 Cucumis melo HOM05D004276 ORTHO05D005126 3.4e-63 245.7 125 92.0
SMO117G0002 Selaginella moellendorffii HOM05D004276 ORTHO05D005126 9.9e-63 244.2 151 78.8
BcaC02g07027 Brassica carinata HOM05D004276 ORTHO05D005126 2.9e-62 242.7 149 79.9
BcaC02g12509 Brassica carinata HOM05D004276 ORTHO05D005126 2.9e-62 242.7 149 79.9
C04p01790 Brassica napus HOM05D004276 ORTHO05D005126 2.9e-62 242.7 149 79.9
C04p72140 Brassica napus HOM05D004276 ORTHO05D005126 2.9e-62 242.7 149 79.9
A05p01570 Brassica napus HOM05D004276 ORTHO05D005126 3.8e-62 242.3 149 79.2
BraA05t19152Z Brassica rapa HOM05D004276 ORTHO05D005126 3.8e-62 242.3 149 79.2
A04p34320 Brassica napus HOM05D004276 ORTHO05D005126 6.4e-62 241.5 149 79.2
BraA04t18893Z Brassica rapa HOM05D004276 ORTHO05D005126 6.4e-62 241.5 149 79.2
SalBow3G3563 Salvia bowleyana HOM05D004276 ORTHO05D005126 8.4e-62 241.1 211 62.1
Mapoly0007s0029 Marchantia polymorpha HOM05D004276 ORTHO05D005126 1.1e-61 240.7 147 77.6
BcaB06g29435 Brassica carinata HOM05D004276 ORTHO05D005126 4.1e-61 238.8 149 78.5
BcaC02g12702 Brassica carinata HOM05D004276 ORTHO05D005126 7.1e-61 238.0 149 77.9
CBR_g20329 Chara braunii HOM05D004276 ORTHO05D005126 7.8e-60 234.6 150 76.0
Sabra02G0145400 Salix brachista HOM05D004276 ORTHO05D005126 4.3e-58 228.8 172 67.4
SalBow1G3478 Salvia bowleyana HOM05D004276 ORTHO05D005126 1.2e-55 220.7 125 83.2
Cre16.g679450 Chlamydomonas reinhardtii HOM05D004276 ORTHO05D005126 3.6e-49 199.1 149 66.4
MCO11G412 Micromonas commoda HOM05D004276 ORTHO05D005126 6.9e-48 194.9 149 64.4
Haze_15633 Corylus avellana HOM05D004276 ORTHO05D005126 2.0e-47 193.4 147 66.7
Lsat_1_v5_gn_2_67120 Lactuca sativa HOM05D004276 ORTHO05D005126 4.5e-47 192.2 108 88.0
PRCOL_00001531 Prasinoderma coloniale HOM05D004276 ORTHO05D005126 4.5e-39 165.6 156 58.3
AT1G26530 Arabidopsis thaliana HOM05D004276 ORTHO05D005126 5.8e-39 165.2 149 61.1
Gohir.A06G141040 Gossypium hirsutum HOM05D004276 ORTHO05D005126 3.5e-36 156.0 102 77.5
Haze_27571 Corylus avellana HOM05D004276 ORTHO05D005126 6.0e-36 155.2 117 59.8
Sed0023585 Sechium edule HOM05D004276 ORTHO05D005126 1.1e-32 144.4 152 53.9
SGA_v2.0_scaffold95G28798 Striga asiatica HOM05D004276 ORTHO05D005126 4.5e-31 139.0 93 74.2
AagrBONN_evm.TU.Sc2ySwM_368.2613 Anthoceros agrestis HOM05D004276 ORTHO05D005126 1.7e-30 137.1 68 89.7
MBI07_g03903_MAGBIO Magnolia biondii HOM05D004276 ORTHO05D005126 1.7e-30 137.1 68 92.6
ATR0585G106 Amborella trichopoda HOM05D004276 ORTHO05D005126 5.5e-29 132.1 60 98.3
Glyma.03G254200 Glycine max HOM05D004276 ORTHO05D005126 7.9e-28 128.3 62 91.9
Glyma.19G251700 Glycine max HOM05D004276 ORTHO05D005126 5.1e-27 125.6 159 50.9
COL.COLO4_16625 Corchorus olitorius HOM05D005906 ORTHO05D007359 2.2e-22 110.2 56 85.7
Cc00_g30190 Coffea canephora HOM05D004276 ORTHO05D005126 5.0e-22 109.0 53 94.3
RcHm_v2.0_Chr1g0326781 Rosa chinensis HOM05D004276 ORTHO05D005126 2.5e-21 106.7 66 81.8
RcHm_v2.0_Chr5g0018241 Rosa chinensis HOM05D004276 ORTHO05D005126 3.2e-21 106.3 76 73.7
Nitab4.5_0004748g0010 Nicotiana tabacum HOM05D004276 ORTHO05D005126 2.5e-18 96.7 45 97.8
QL08p061068 Quercus lobata HOM05D004276 ORTHO05D013412 5.7e-18 95.5 51 88.2
AL1G41100 Arabidopsis lyrata HOM05D004276 ORTHO05D005126 9.4e-13 78.2 65 63.1
SHI29225 Sapria himalayana HOM05D004276 ORTHO05D005126 2.7e-12 76.6 80 53.8
MBI17_g03297_MAGBIO Magnolia biondii HOM05D004276 ORTHO05D005126 5.1e-11 72.4 37 91.9
RcHm_v2.0_Chr4g0446551 Rosa chinensis HOM05D004276 ORTHO05D005126 2.6e-10 70.1 34 94.1
DCAR_005368 Daucus carota HOM05D004276 ORTHO05D005126 6.3e-09 65.5 29 93.1
Hma1.2p1_0248F.1_g102040 Hydrangea macrophylla HOM05D001996 ORTHO05D002072 2.4e-08 63.5 29 86.2
MBI18_g19490_MAGBIO Magnolia biondii HOM05D004276 ORTHO05D005126 4.1e-08 62.8 31 87.1
RcHm_v2.0_Chr3g0464711 Rosa chinensis HOM05D004276 ORTHO05D005126 3.4e-07 59.7 35 80.0
MBI02_g45291_MAGBIO Magnolia biondii HOM05D004276 ORTHO05D005126 1.0e-06 58.2 29 82.8


User provided reference genes

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