Gene: ATR0580G146
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0580G146
- Transcript Identifier ATR0580G146.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00019 : 3901696-3923934 : positive
Gene Family Information
- ID HOM05D000306
- #Genes/#Species 1483/99
- Phylogenetic origin
- ID ORTHO05D005993
- #Genes/#Species 149/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00019.245.v1.0
- pacid 31572356
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009102 | ISO | PLAZA Integrative Orthology | biotin biosynthetic process | AT5G57590 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0008483 | IEA | InterPro | transaminase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0005516 | ISO | PLAZA Homology (enrichment) | calmodulin binding | HOM05D000306 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G57590 |
| GO:0004141 | ISO | PLAZA Integrative Orthology | dethiobiotin synthase activity | AT5G57590 |
| GO:0004015 | ISO | PLAZA Integrative Orthology | adenosylmethionine-8-amino-7-oxononanoate transaminase activity | AT5G57590 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032040 | IEA | InterPro | small-subunit processome | |
| GO:0005759 | ISO | PLAZA Integrative Orthology | mitochondrial matrix | AT5G57590 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G57590 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR006984 | rRNA-processing protein Fcf1/Utp23 |
| IPR029060 | PIN-like domain superfamily |
| IPR005814 | Aminotransferase class-III |
| IPR002716 | PIN domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR037503 | rRNA-processing protein Fcf1, PIN domain |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |