Gene: AT2G46230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G46230
  • Transcript Identifier AT2G46230.1
  • Gene Type Coding gene
  • Location Chr2 : 18984459-18985850 : negative

Gene Family Information

  • ID HOM05D004276
  • #Genes/#Species 166/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G46230.1
  • uniprot O82346

Descriptions

  • Description PIN domain-like family protein
  • Computational description PIN domain-like family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984), Nucleotide binding protein, PINc (InterPro:IPR006596); BEST Arabidopsis thaliana protein match is: PIN domain-like family protein (TAIR:AT1G26530.1); Has 697 Blast hits to 697 proteins in 237 species: Archae - 32; Bacteria - 0; Metazoa - 241; Fungi - 212; Plants - 105; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0042254
IEA
GOA Databaseribosome biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0032040
IBA
IEA
Gene Ontologysmall-subunit processome1
GO:0032040
IEA
InterProsmall-subunit processome
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IBA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002716 PIN domain
IPR037503 rRNA-processing protein Fcf1, PIN domain
IPR029060 PIN-like domain superfamily
IPR006984 rRNA-processing protein Fcf1/Utp23
Mapman id Description
17.1.1.7 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.RNA endonuclease (FCF1)