Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 4.7e-203 711.4 500 100.0
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.3e-144 517.3 424 72.6
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 2.4e-138 496.5 431 69.6
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 2.9e-136 489.6 433 67.7
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 1.8e-133 480.3 417 67.9
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 5.7e-132 475.3 432 66.4
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 7.4e-132 474.9 442 66.1
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 2.2e-131 473.4 431 63.6
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 2.2e-131 473.4 437 63.4
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 1.1e-130 471.1 431 64.5
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.2e-129 467.6 434 65.4
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 1.2e-129 467.6 431 65.4
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 1.5e-129 467.2 429 62.0
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 3.4e-129 466.1 431 65.2
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 4.5e-129 465.7 430 64.2
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 5.9e-129 465.3 430 66.5
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 1.0e-128 464.5 429 62.5
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 1.1e-127 461.1 346 72.5
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 3.2e-127 459.5 423 65.2
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 3.2e-127 459.5 331 73.1
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 3.2e-127 459.5 416 68.5
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 7.2e-127 458.4 432 62.0
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 9.4e-127 458.0 434 65.2
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 9.4e-127 458.0 430 60.7
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 1.2e-126 457.6 332 72.9
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 1.6e-126 457.2 446 63.0
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 1.4e-125 454.1 432 61.8
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 5.1e-125 452.2 429 61.1
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 2.0e-124 450.3 434 66.1
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 3.3e-124 449.5 432 63.7
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 3.3e-124 449.5 432 63.4
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 5.7e-124 448.7 432 62.0
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 5.7e-124 448.7 443 63.9
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 1.3e-123 447.6 337 72.1
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 2.2e-123 446.8 431 60.3
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 3.7e-123 446.0 429 63.2
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 4.8e-123 445.7 434 60.6
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 2.4e-122 443.4 318 72.6
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 3.5e-121 439.5 337 69.4
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 4.5e-121 439.1 437 59.7
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 4.5e-121 439.1 348 69.0
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 1.3e-120 437.6 329 69.0
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 3.8e-120 436.0 443 62.5
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 6.5e-120 435.3 438 58.9
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 7.2e-119 431.8 330 72.1
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 7.2e-119 431.8 477 54.7
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 1.2e-118 431.0 430 58.6
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 2.1e-118 430.3 420 61.2
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 5.2e-117 425.6 437 64.3
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 8.8e-117 424.9 452 56.6
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 1.7e-115 420.6 436 58.0
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 4.8e-115 419.1 472 58.1
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 8.2e-115 418.3 303 71.3
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 1.4e-114 417.5 325 68.6
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 1.8e-114 417.2 303 71.0
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 4.1e-114 416.0 330 68.2
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 5.3e-114 415.6 443 57.6
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 7.0e-114 415.2 389 66.6
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 7.0e-114 415.2 419 63.7
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 1.6e-113 414.1 330 68.2
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 4.5e-113 412.5 432 62.0
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 4.5e-113 412.5 303 70.6
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 7.7e-113 411.8 360 65.0
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 2.5e-111 406.8 436 62.4
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 7.2e-111 405.2 316 69.6
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.2e-110 404.4 303 69.6
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 2.1e-110 403.7 315 69.5
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 2.1e-110 403.7 444 58.6
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 2.1e-110 403.7 462 60.0
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 1.0e-109 401.4 399 61.2
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 5.2e-109 399.1 328 67.4
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 2.6e-108 396.7 400 62.0
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 6.3e-107 392.1 326 67.5
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 2.4e-106 390.2 347 62.2
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 2.4e-106 390.2 330 65.2
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 3.1e-106 389.8 435 60.9
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 2.0e-105 387.1 301 68.1
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 1.3e-104 384.4 447 59.3
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 5.0e-104 382.5 331 66.2
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 1.5e-103 380.9 439 61.3
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 3.2e-103 379.8 439 61.0
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 1.6e-102 377.5 291 68.7
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 1.0e-101 374.8 342 63.7
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 1.8e-101 374.0 405 58.3
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 1.5e-100 370.9 360 61.4
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.0e-100 370.5 274 70.8
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 2.6e-100 370.2 380 55.8
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 9.8e-100 368.2 341 61.9
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 2.2e-99 367.1 333 62.5
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 2.8e-99 366.7 441 55.6
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 8.3e-99 365.2 290 65.9
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 3.1e-98 363.2 333 61.9
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 3.1e-98 363.2 387 59.2
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 7.0e-98 362.1 378 56.1
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 1.2e-97 361.3 447 53.0
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 1.6e-97 360.9 390 57.9
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 2.0e-97 360.5 317 62.1
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 7.7e-97 358.6 327 60.9
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 7.7e-97 358.6 327 60.9
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 2.5e-95 353.6 444 51.8
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 2.1e-94 350.5 605 40.8
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 4.0e-93 346.3 444 51.1
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 4.0e-93 346.3 325 59.4
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 3.9e-88 329.7 355 58.9
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 5.6e-87 325.9 230 73.5
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 4.7e-86 322.8 340 55.0
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 2.2e-83 313.9 333 58.9
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 4.1e-82 309.7 375 54.4
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 1.0e-80 305.1 250 65.2
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 1.3e-80 304.7 290 55.9
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 8.6e-80 302.0 447 46.8
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 5.6e-79 299.3 354 51.7
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 9.5e-79 298.5 291 55.7
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.7e-72 277.7 228 66.2
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 9.9e-68 261.9 352 47.4
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 2.1e-65 254.2 363 45.2
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 1.4e-61 241.5 409 45.0
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 7.6e-60 235.7 213 58.7
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 1.7e-59 234.6 204 57.8
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 1.9e-50 204.5 327 43.1
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 3.2e-50 203.8 370 37.6
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 8.7e-40 169.1 286 38.1
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 2.2e-35 154.5 158 57.0
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 7.9e-33 146.0 194 51.0
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 8.4e-27 125.9 173 46.2
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 4.2e-26 123.6 173 45.7
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 4.2e-26 123.6 173 45.7
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 5.3e-21 106.7 70 70.0
Ah.03g144030 Amaranthus hybridus HOM05D005480 ORTHO05D006735 9.4e-18 95.9 83 62.7
PRCOL_00002206 Prasinoderma coloniale HOM05D005480 ORTHO05D006735 3.8e-11 73.9 338 25.4
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 6.5e-11 73.2 43 76.7
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 5.5e-10 70.1 368 25.5
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 9.4e-10 69.3 95 48.4
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 9.4e-10 69.3 95 48.4
C04p33290 Brassica napus HOM05D005480 ORTHO05D006735 3.7e-06 57.4 109 41.3


User provided reference genes

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