Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.8e-72 274.6 129 100.0
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 2.0e-25 119.4 126 53.2
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 4.5e-25 118.2 118 56.8
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 1.3e-24 116.7 123 52.8
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.9e-24 115.5 123 52.0
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.9e-24 115.5 123 52.0
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 3.8e-24 115.2 126 52.4
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 3.8e-24 115.2 123 51.2
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 3.8e-24 115.2 123 51.2
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 5.0e-24 114.8 123 52.0
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-24 114.8 118 55.9
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 8.6e-24 114.0 123 50.4
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 8.6e-24 114.0 123 51.2
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 8.6e-24 114.0 123 51.2
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.6e-24 114.0 116 56.0
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.6e-24 114.0 116 56.0
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.3e-23 112.1 117 53.8
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 3.3e-23 112.1 123 50.4
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 3.3e-23 112.1 123 50.4
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 51.2
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 4.3e-23 111.7 127 48.0
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 49.6
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 49.6
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 49.6
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 49.6
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 49.6
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 49.6
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 4.3e-23 111.7 123 49.6
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 5.6e-23 111.3 124 51.6
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 5.6e-23 111.3 117 53.0
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.6e-23 111.3 116 55.2
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 5.6e-23 111.3 117 53.8
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 7.3e-23 110.9 123 50.4
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 9.5e-23 110.5 123 50.4
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 1.6e-22 109.8 123 49.6
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 2.1e-22 109.4 123 49.6
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 3.6e-22 108.6 123 49.6
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 4.7e-22 108.2 113 54.0
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.4e-21 106.7 123 48.8
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.0e-21 105.5 126 50.0
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 4.0e-21 105.1 110 52.7
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 8.9e-21 104.0 121 49.6
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.2e-20 103.6 123 48.0
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 1.2e-20 103.6 123 48.0
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 1.2e-20 103.6 122 48.4
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 1.2e-20 103.6 123 48.0
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 2.6e-20 102.4 74 67.6
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 4.4e-20 101.7 122 47.5
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 4.4e-20 101.7 122 47.5
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 4.4e-20 101.7 122 47.5
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 4.4e-20 101.7 122 47.5
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 4.4e-20 101.7 122 47.5
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 4.4e-20 101.7 122 47.5
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 4.4e-20 101.7 122 47.5
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 4.4e-20 101.7 110 52.7
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 9.8e-20 100.5 110 51.8
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 9.8e-20 100.5 110 50.0
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 9.8e-20 100.5 110 50.0
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 9.8e-20 100.5 110 50.0
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.3e-19 100.1 110 50.0
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.7e-19 99.8 112 49.1
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 2.2e-19 99.4 110 49.1
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 2.9e-19 99.0 122 46.7
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 2.9e-19 99.0 122 46.7
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 2.9e-19 99.0 122 46.7
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 2.9e-19 99.0 122 46.7
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.7e-19 98.6 123 47.2
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.7e-19 98.6 114 48.2
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 4.9e-19 98.2 110 50.9
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.4e-19 97.8 110 50.9
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 1.1e-18 97.1 122 48.4
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.1e-18 95.1 72 65.3
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 9.2e-18 94.0 79 58.2
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-17 93.2 105 50.5
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 2.0e-17 92.8 115 47.0
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 2.7e-17 92.4 123 43.9
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 3.5e-17 92.0 106 49.1
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.5e-17 92.0 109 48.6
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 1.3e-16 90.1 110 47.3
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 1.3e-16 90.1 110 47.3
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 1.3e-16 90.1 78 57.7
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.3e-16 89.4 111 45.9
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 3.9e-16 88.6 110 47.3
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 1.5e-15 86.7 112 46.4
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.1e-14 82.8 66 60.6
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 6.2e-14 81.3 49 75.5
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 1.1e-13 80.5 72 58.3
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.8e-13 79.7 121 43.0
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.5e-12 76.6 53 66.0
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.5e-12 76.6 46 78.3
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-12 74.7 42 81.0
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-12 74.7 46 73.9
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 7.5e-12 74.3 48 70.8
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 9.8e-12 73.9 101 43.6
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 2.9e-11 72.4 105 41.0
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 3.7e-11 72.0 129 37.2
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 3.7e-11 72.0 108 39.8
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.1e-10 70.5 102 41.2
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.9e-10 69.7 117 35.0
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 7.0e-10 67.8 83 41.0
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 1.2e-09 67.0 58 58.6
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.6e-09 65.1 88 46.6
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.6e-09 65.1 88 46.6
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.6e-09 65.1 88 46.6
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.6e-09 65.1 88 46.6
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.6e-09 65.1 88 46.6
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 6.0e-09 64.7 124 36.3
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 6.0e-09 64.7 96 41.7
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.3e-08 63.5 87 46.0
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.3e-08 63.5 87 46.0
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.3e-08 63.5 87 46.0
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.3e-08 63.5 87 46.0
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.3e-08 63.5 87 46.0
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-08 63.2 93 44.1
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 2.3e-08 62.8 110 39.1
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 3.0e-08 62.4 87 43.7
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 3.0e-08 62.4 87 43.7
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 6.6e-08 61.2 87 42.5
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 8.6e-08 60.8 93 40.9
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.5e-07 59.3 88 40.9
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.5e-07 59.3 88 40.9
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.5e-07 59.3 89 42.7
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 2.5e-07 59.3 83 37.3
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 3.3e-07 58.9 82 39.0
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 4.3e-07 58.5 87 42.5
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 4.3e-07 58.5 100 37.0
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 4.3e-07 58.5 86 41.9
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 7.3e-07 57.8 88 38.6
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 7.3e-07 57.8 88 38.6
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 9.5e-07 57.4 87 41.4
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 9.5e-07 57.4 87 40.2
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 4.7e-06 55.1 117 30.8
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 6.2e-06 54.7 38 71.1


User provided reference genes

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