Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08683 Selenicereus undatus HOM05D004582 ORTHO05D005507 3.1e-65 251.5 116 100.0
Nn8g39808 Nelumbo nucifera HOM05D004582 ORTHO05D005507 2.3e-60 235.3 122 89.3
TAR629G2421 Trochodendron aralioides HOM05D004582 ORTHO05D005507 3.0e-60 235.0 116 89.7
CSS0028000 Camellia sinensis var. sinensis HOM05D004582 ORTHO05D005507 1.9e-59 232.3 116 88.8
Sc06g0007770 Simmondsia chinensis HOM05D004582 ORTHO05D005507 5.6e-59 230.7 116 88.8
Potri.010G255000 Populus trichocarpa HOM05D004582 ORTHO05D005507 2.1e-58 228.8 115 87.8
Manes.01G004880 Manihot esculenta HOM05D004582 ORTHO05D005507 2.8e-58 228.4 115 87.8
Hma1.2p1_2673F.1_g326700 Hydrangea macrophylla HOM05D004582 ORTHO05D005507 4.8e-58 227.6 114 88.6
GSVIVG01034346001 Vitis vinifera HOM05D004582 ORTHO05D005507 4.8e-58 227.6 114 87.7
Ciclev10017231m.g Citrus clementina HOM05D004582 ORTHO05D005507 8.2e-58 226.9 113 88.5
MBI11_g25051_MAGBIO Magnolia biondii HOM05D004582 ORTHO05D005507 1.1e-57 226.5 116 86.2
Actinidia04370 Actinidia chinensis HOM05D004582 ORTHO05D005507 1.4e-57 226.1 115 87.0
MELO3C023752.2 Cucumis melo HOM05D004582 ORTHO05D005507 1.8e-57 225.7 115 87.0
CsaV3_3G020290 Cucumis sativus L. HOM05D004582 ORTHO05D005507 1.8e-57 225.7 115 87.0
Potri.008G002400 Populus trichocarpa HOM05D004582 ORTHO05D005507 1.8e-57 225.7 115 87.0
Sed0002882 Sechium edule HOM05D004582 ORTHO05D005507 2.4e-57 225.3 115 87.0
Cfa005243 Carpinus fangiana HOM05D004582 ORTHO05D005507 3.1e-57 224.9 115 86.1
vmacro00989 Vaccinium macrocarpon HOM05D004582 ORTHO05D005507 4.0e-57 224.6 112 89.3
CANSAT78G1495 Cannabis sativa HOM05D004582 ORTHO05D005507 6.9e-57 223.8 112 87.5
AUR62032890 Chenopodium quinoa HOM05D004582 ORTHO05D005507 1.2e-56 223.0 113 92.0
CiPaw.06G093300 Carya illinoinensis HOM05D004582 ORTHO05D005507 1.5e-56 222.6 115 85.2
Cc11_g00370 Coffea canephora HOM05D004582 ORTHO05D005507 1.5e-56 222.6 112 87.5
Sed0027851 Sechium edule HOM05D004582 ORTHO05D005507 1.5e-56 222.6 117 86.3
SGA_v2.0_scaffold231G43443 Striga asiatica HOM05D004582 ORTHO05D005507 2.6e-56 221.9 115 84.3
VMungo0251G1823 Vigna mungo HOM05D000329 ORTHO05D002813 2.6e-56 221.9 112 89.3
Glyma.17G000400 Glycine max HOM05D004582 ORTHO05D005507 4.5e-56 221.1 112 87.5
Lalb_Chr10g0094681 Lupinus albus HOM05D004582 ORTHO05D005507 7.6e-56 220.3 115 86.1
PGSC0003DMG400025297 Solanum tuberosum HOM05D004582 ORTHO05D005507 7.6e-56 220.3 115 84.3
CAN.G419.18 Capsicum annuum HOM05D004582 ORTHO05D005507 1.0e-55 219.9 114 84.2
Gohir.A04G109900 Gossypium hirsutum HOM05D004582 ORTHO05D005507 1.0e-55 219.9 115 85.2
Gohir.D04G150100 Gossypium hirsutum HOM05D004582 ORTHO05D005507 1.0e-55 219.9 115 85.2
Gorai.012G136700 Gossypium raimondii HOM05D004582 ORTHO05D005507 1.0e-55 219.9 115 85.2
Migut.N02765 Erythranthe guttata HOM05D004582 ORTHO05D005507 1.3e-55 219.5 115 85.2
Phvul.003G004200 Phaseolus vulgaris HOM05D004582 ORTHO05D005507 1.3e-55 219.5 112 87.5
THA.LOC104819361 Tarenaya hassleriana HOM05D004582 ORTHO05D005507 1.3e-55 219.5 115 83.5
Eucgr.G02614 Eucalyptus grandis HOM05D004582 ORTHO05D005507 1.7e-55 219.2 112 86.6
Solyc04g008750.3 Solanum lycopersicum HOM05D004582 ORTHO05D005507 1.7e-55 219.2 115 83.5
Sopen04g003930 Solanum pennellii HOM05D004582 ORTHO05D005507 1.7e-55 219.2 115 83.5
Duzib248G0155 Durio zibethinus HOM05D004582 ORTHO05D005507 2.2e-55 218.8 115 84.3
MSTRG.25043 Avicennia marina HOM05D004582 ORTHO05D005507 2.9e-55 218.4 113 84.1
Glyma.07G274100 Glycine max HOM05D004582 ORTHO05D005507 2.9e-55 218.4 112 86.6
Thecc.02G151700 Theobroma cacao HOM05D004582 ORTHO05D005507 2.9e-55 218.4 115 84.3
Lsat_1_v5_gn_1_108541 Lactuca sativa HOM05D004582 ORTHO05D005507 4.9e-55 217.6 116 81.9
Phvul.001G068300 Phaseolus vulgaris HOM05D004582 ORTHO05D005507 4.9e-55 217.6 112 86.6
Sp2g26760 Schrenkiella parvula HOM05D004582 ORTHO05D005507 6.5e-55 217.2 115 82.6
THA.LOC104800345 Tarenaya hassleriana HOM05D004582 ORTHO05D005507 8.4e-55 216.9 115 82.6
HanXRQChr15g0475831 Helianthus annuus HOM05D004582 ORTHO05D005507 1.1e-54 216.5 116 82.8
Thhalv10005155m.g Eutrema salsugineum HOM05D004582 ORTHO05D005507 1.4e-54 216.1 115 81.7
Carub.0008s2444 Capsella rubella HOM05D004582 ORTHO05D005507 1.9e-54 215.7 115 81.7
Ca_16312_v3 Cicer arietinum L. HOM05D004582 ORTHO05D005507 2.5e-54 215.3 112 84.8
Gohir.D13G059000 Gossypium hirsutum HOM05D004582 ORTHO05D005507 2.5e-54 215.3 112 84.8
SalBow6G5789 Salvia bowleyana HOM05D004582 ORTHO05D005507 2.5e-54 215.3 114 84.2
SalBow8G4318 Salvia bowleyana HOM05D004582 ORTHO05D005507 2.5e-54 215.3 114 84.2
BcaB07g29700 Brassica carinata HOM05D004582 ORTHO05D005507 3.2e-54 214.9 115 82.6
BcaC03g18219 Brassica carinata HOM05D004582 ORTHO05D005507 4.2e-54 214.5 115 81.7
A02p42940 Brassica napus HOM05D004582 ORTHO05D005507 4.2e-54 214.5 115 81.7
C02p62880 Brassica napus HOM05D004582 ORTHO05D005507 4.2e-54 214.5 115 81.7
BraA02t09217Z Brassica rapa HOM05D004582 ORTHO05D005507 4.2e-54 214.5 115 81.7
Gohir.A13G062900 Gossypium hirsutum HOM05D004582 ORTHO05D005507 4.2e-54 214.5 112 83.9
PGR142G2001 Punica granatum HOM05D004582 ORTHO05D005507 5.5e-54 214.2 112 83.0
Aa31LG10G11080 Aethionema arabicum HOM05D004582 ORTHO05D005507 7.1e-54 213.8 112 83.0
Aa31LG1G18160 Aethionema arabicum HOM05D004582 ORTHO05D005507 7.1e-54 213.8 112 83.0
Carub.0006s0753 Capsella rubella HOM05D004582 ORTHO05D005507 7.1e-54 213.8 112 83.0
TWI15G0512 Tripterygium wilfordii HOM05D004582 ORTHO05D005507 7.1e-54 213.8 112 84.8
Atru.chr11.27 Acer truncatum HOM05D004582 ORTHO05D005507 9.3e-54 213.4 113 83.2
AL8G40820 Arabidopsis lyrata HOM05D004582 ORTHO05D005507 9.3e-54 213.4 115 81.7
AT5G63670 Arabidopsis thaliana HOM05D004582 ORTHO05D005507 9.3e-54 213.4 115 81.7
Lj6g0014483 Lotus japonicus HOM05D004582 ORTHO05D005507 9.3e-54 213.4 110 84.5
Aqoxy3G01747 Aquilegia oxysepala HOM05D004582 ORTHO05D005507 1.2e-53 213.0 116 81.9
Peaxi162Scf00329g00317 Petunia axillaris HOM05D004582 ORTHO05D005507 1.2e-53 213.0 114 81.6
Aa31LG3G17960 Aethionema arabicum HOM05D004582 ORTHO05D005507 1.6e-53 212.6 112 82.1
MSTRG.1036 Avicennia marina HOM05D004582 ORTHO05D005507 1.6e-53 212.6 115 80.9
Hma1.2p1_1901F.1_g307030 Hydrangea macrophylla HOM05D004582 ORTHO05D005507 2.1e-53 212.2 107 87.9
Psat5g071960 Pisum sativum HOM05D004582 ORTHO05D005507 2.1e-53 212.2 113 83.2
CARHR278210 Cardamine hirsuta HOM05D004582 ORTHO05D005507 2.7e-53 211.8 115 80.9
ECA246G1034 Erigeron canadensis HOM05D004582 ORTHO05D005507 2.7e-53 211.8 115 80.9
Aqoxy5G02794 Aquilegia oxysepala HOM05D004582 ORTHO05D005507 3.5e-53 211.5 116 80.2
HPP92_027251 Vanilla planifolia HOM05D004582 ORTHO05D005507 3.5e-53 211.5 115 80.0
PSO541G0162 Papaver somniferum HOM05D004582 ORTHO05D005507 4.6e-53 211.1 114 82.5
PSO675G8561 Papaver somniferum HOM05D004582 ORTHO05D005507 4.6e-53 211.1 114 82.5
AT5G08565 Arabidopsis thaliana HOM05D004582 ORTHO05D005507 7.9e-53 210.3 112 82.1
Os07g0623400 Oryza sativa ssp. japonica HOM05D004582 ORTHO05D005507 1.3e-52 209.5 112 78.6
Nitab4.5_0000129g0010 Nicotiana tabacum HOM05D004582 ORTHO05D005507 1.8e-52 209.1 112 83.0
AL6G19290 Arabidopsis lyrata HOM05D004582 ORTHO05D005507 3.0e-52 208.4 112 80.4
ATR0693G307 Amborella trichopoda HOM05D004582 ORTHO05D005507 6.7e-52 207.2 116 76.7
Prupe.3G015100 Prunus persica HOM05D004582 ORTHO05D005507 6.7e-52 207.2 110 82.7
MD09G1278200 Malus domestica HOM05D004582 ORTHO05D005507 8.7e-52 206.8 115 79.1
SEGI_05202 Sequoiadendron giganteum HOM05D004582 ORTHO05D005507 1.1e-51 206.5 114 76.3
unitig_749.g13837 Utricularia gibba HOM05D004582 ORTHO05D005507 1.1e-51 206.5 113 78.8
Sp6g34300 Schrenkiella parvula HOM05D004582 ORTHO05D005507 1.5e-51 206.1 112 79.5
MD17G1271200 Malus domestica HOM05D004582 ORTHO05D005507 2.5e-51 205.3 112 79.5
Medtr3g092730 Medicago truncatula HOM05D004582 ORTHO05D005507 2.5e-51 205.3 113 80.5
Medtr3g092770 Medicago truncatula HOM05D004582 ORTHO05D005507 2.5e-51 205.3 113 80.5
PSO339G5842 Papaver somniferum HOM05D004582 ORTHO05D005507 2.5e-51 205.3 114 80.7
TPR.G31176 Trifolium pratense HOM05D004582 ORTHO05D005507 2.5e-51 205.3 110 81.8
BcaB01g05582 Brassica carinata HOM05D004582 ORTHO05D005507 1.3e-50 203.0 112 77.7
MD04G1047800 Malus domestica HOM05D004582 ORTHO05D005507 1.3e-50 203.0 112 78.6
BcaB01g05655 Brassica carinata HOM05D004582 ORTHO05D005507 3.7e-50 201.4 112 76.8
A03p03980 Brassica napus HOM05D004582 ORTHO05D005507 3.7e-50 201.4 112 76.8
C03p04450 Brassica napus HOM05D004582 ORTHO05D005507 3.7e-50 201.4 112 76.8
RcHm_v2.0_Chr4g0406241 Rosa chinensis HOM05D004582 ORTHO05D005507 1.1e-49 199.9 112 80.4
Gorai.013G066800 Gossypium raimondii HOM05D004582 ORTHO05D005507 1.4e-49 199.5 148 64.9
FvH4_4g10630 Fragaria vesca HOM05D004582 ORTHO05D005507 1.8e-49 199.1 112 80.4
FAN07G0418 Fragaria x ananassa HOM05D004582 ORTHO05D005507 1.8e-49 199.1 112 80.4
FAN12G0218 Fragaria x ananassa HOM05D004582 ORTHO05D005507 1.8e-49 199.1 112 80.4
FAN12G1626 Fragaria x ananassa HOM05D004582 ORTHO05D005507 1.8e-49 199.1 112 80.4
FAN17G0627 Fragaria x ananassa HOM05D004582 ORTHO05D005507 1.8e-49 199.1 112 80.4
ClCG05G012130 Citrullus lanatus HOM05D004582 ORTHO05D005507 2.4e-49 198.7 100 90.0
Duzib132G0727 Durio zibethinus HOM05D004582 ORTHO05D005507 2.4e-49 198.7 99 88.9
Cfa008860 Carpinus fangiana HOM05D002331 ORTHO05D002624 3.1e-49 198.4 98 88.8
SGA_v2.0_scaffold417G51254 Striga asiatica HOM05D004582 ORTHO05D005507 4.1e-49 198.0 99 86.9
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 6.9e-49 197.2 99 88.9
DCAR_026806 Daucus carota HOM05D004582 ORTHO05D005507 6.5e-47 190.7 101 82.2
Ah.11g040470 Amaranthus hybridus HOM05D004582 ORTHO05D005507 8.5e-47 190.3 146 65.1
Atru.chr6.1863 Acer truncatum HOM05D004582 ORTHO05D005507 1.1e-46 189.9 98 85.7
COL.COLO4_33156 Corchorus olitorius HOM05D004582 ORTHO05D005507 1.1e-46 189.9 98 85.7
FAN22G0072 Fragaria x ananassa HOM05D004582 ORTHO05D005507 5.5e-46 187.6 110 79.1
Atru.chr11.31 Acer truncatum HOM05D004582 ORTHO05D005507 1.2e-45 186.4 98 83.7
HanXRQChr01g0026751 Helianthus annuus HOM05D004582 ORTHO05D005507 6.1e-45 184.1 113 68.1
HanXRQChr01g0026901 Helianthus annuus HOM05D004582 ORTHO05D005507 6.1e-45 184.1 113 68.1
Dinv17660 Davidia involucrata HOM05D004582 ORTHO05D005507 7.9e-45 183.7 95 85.3
Pp3c6_2640 Physcomitrium patens HOM05D004582 ORTHO05D005507 7.9e-45 183.7 111 68.5
SalBow6G4393 Salvia bowleyana HOM05D004582 ORTHO05D005507 1.4e-44 183.0 112 69.6
SalBow8G4232 Salvia bowleyana HOM05D004582 ORTHO05D005507 1.4e-44 183.0 112 69.6
AagrBONN_evm.TU.Sc2ySwM_344.5487 Anthoceros agrestis HOM05D004582 ORTHO05D005507 2.3e-44 182.2 108 71.3
BolC2t12361H Brassica oleracea HOM05D004582 ORTHO05D005507 1.5e-43 179.5 126 67.5
Mapoly0092s0011 Marchantia polymorpha HOM05D004582 ORTHO05D005507 4.3e-43 177.9 108 70.4
SGA_v2.0_scaffold14G06942 Striga asiatica HOM05D004582 ORTHO05D005507 1.3e-42 176.4 141 57.4
Mapoly0166s0006 Marchantia polymorpha HOM05D004582 ORTHO05D005507 4.8e-42 174.5 109 68.8
EL10Ac9g23021 Beta vulgaris HOM05D004582 ORTHO05D005507 1.8e-41 172.6 79 97.5
SMO358G0649 Selaginella moellendorffii HOM05D004582 ORTHO05D005507 1.2e-40 169.9 108 67.6
CARHR204400 Cardamine hirsuta HOM05D004582 ORTHO05D005507 1.9e-38 162.5 97 72.2
Oeu039967.1 Olea europaea HOM05D004582 ORTHO05D005507 3.6e-37 158.3 79 86.1
Oeu002508.1 Olea europaea HOM05D004582 ORTHO05D005507 1.8e-36 156.0 78 85.9
ATR0772G012 Amborella trichopoda HOM05D004582 ORTHO05D005507 5.1e-36 154.5 78 82.1
CiPaw.05G123600 Carya illinoinensis HOM05D004582 ORTHO05D005507 5.1e-36 154.5 77 87.0
QL03p073673 Quercus lobata HOM05D004582 ORTHO05D005507 5.1e-36 154.5 74 87.8
SEGI_39424 Sequoiadendron giganteum HOM05D004582 ORTHO05D005507 2.4e-33 145.6 78 76.9
Thhalv10015347m.g Eutrema salsugineum HOM05D004582 ORTHO05D005507 1.0e-31 140.2 74 81.1
Sc06g0007290 Simmondsia chinensis HOM05D004582 ORTHO05D005507 5.0e-31 137.9 99 70.7
MCO11G500 Micromonas commoda HOM05D004582 ORTHO05D005507 2.5e-30 135.6 104 51.9
CBR_g44398 Chara braunii HOM05D004582 ORTHO05D005507 9.4e-30 133.7 92 60.9
Sabra10G0198500 Salix brachista HOM05D004582 ORTHO05D005507 1.4e-28 129.8 98 68.4
PRCOL_00005197 Prasinoderma coloniale HOM05D004582 ORTHO05D005507 9.7e-27 123.6 94 53.2
Nitab4.5_0008730g0050 Nicotiana tabacum HOM05D004582 ORTHO05D005507 1.3e-23 113.2 74 73.0
Nitab4.5_0000129g0060 Nicotiana tabacum HOM05D004582 ORTHO05D005507 2.2e-23 112.5 75 70.7
Lj5g0002326 Lotus japonicus HOM05D004582 ORTHO05D005507 1.5e-19 99.8 63 63.5
Lj5g0003678 Lotus japonicus HOM05D004582 ORTHO05D005507 1.5e-19 99.8 63 63.5
Lj5g0005298 Lotus japonicus HOM05D004582 ORTHO05D005507 1.5e-19 99.8 63 63.5
Cre02.g116300 Chlamydomonas reinhardtii HOM05D004582 ORTHO05D005507 2.8e-18 95.5 95 44.2
Rhsim12G0090000 Rhododendron simsii HOM05D004582 ORTHO05D005507 6.3e-18 94.4 161 37.9
Haze_26483 Corylus avellana HOM05D004582 ORTHO05D005507 4.1e-17 91.7 96 41.7
MD07G1114100 Malus domestica HOM05D004582 ORTHO05D005507 2.0e-16 89.4 57 64.9
BcaB01g05656 Brassica carinata HOM05D000467 ORTHO05D000379 7.7e-16 87.4 56 71.4
Haze_11883 Corylus avellana HOM05D004582 ORTHO05D005507 1.3e-15 86.7 77 62.3
Lsat_1_v5_gn_1_108420 Lactuca sativa HOM05D004582 ORTHO05D005507 1.4e-12 76.6 41 78.0
Cfa023443 Carpinus fangiana HOM05D004582 ORTHO05D123741 4.0e-12 75.1 83 39.8
Cpa.g.sc887.1 Carica papaya HOM05D004582 ORTHO05D005507 3.4e-11 72.0 38 84.2
Nitab4.5_0011163g0030 Nicotiana tabacum HOM05D004582 ORTHO05D005507 3.1e-09 65.5 74 50.0


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