Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.2e-70 268.9 138 100.0
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 9.8e-42 173.7 138 64.5
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 5.4e-40 167.9 140 62.9
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.5e-37 159.1 152 57.2
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.3e-33 146.7 143 55.9
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 4.1e-32 141.7 144 54.2
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 2.7e-31 139.0 142 53.5
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 4.5e-31 138.3 143 52.4
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.0e-30 137.1 139 54.7
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.1e-29 133.7 126 53.2
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 1.1e-29 133.7 143 52.4
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.5e-29 133.3 134 51.5
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 3.3e-29 132.1 143 51.0
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 4.2e-29 131.7 135 51.9
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 5.5e-29 131.3 143 51.0
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 7.2e-29 131.0 147 47.6
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 2.8e-28 129.0 147 48.3
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 4.7e-28 128.3 143 50.3
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 2.3e-27 125.9 143 49.0
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 4.0e-27 125.2 108 56.5
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 8.9e-27 124.0 143 49.0
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.2e-26 123.6 143 47.6
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 1.2e-26 123.6 147 48.3
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 1.5e-26 123.2 144 50.0
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 9.8e-26 120.6 134 47.0
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.3e-25 120.2 140 47.9
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 4.9e-25 118.2 144 50.7
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 4.9e-25 118.2 142 48.6
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 8.3e-25 117.5 146 45.2
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.1e-24 117.1 143 44.8
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 7.0e-24 114.4 141 48.9
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 3.5e-23 112.1 142 46.5
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 3.5e-23 112.1 142 47.2
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 5.9e-23 111.3 142 46.5
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 5.9e-23 111.3 144 45.8
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 1.0e-22 110.5 142 46.5
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.7e-22 109.8 143 47.6
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.3e-22 109.4 147 46.9
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 2.9e-22 109.0 143 46.9
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 2.9e-22 109.0 136 47.1
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 3.9e-22 108.6 142 49.3
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 5.0e-22 108.2 118 51.7
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 5.0e-22 108.2 142 46.5
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 5.0e-22 108.2 142 46.5
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 6.6e-22 107.8 131 49.6
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 6.6e-22 107.8 143 50.3
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 8.6e-22 107.5 143 46.9
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 1.5e-21 106.7 136 45.6
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 1.5e-21 106.7 144 45.1
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 1.9e-21 106.3 145 42.1
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 2.5e-21 105.9 138 47.8
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 2.5e-21 105.9 144 50.0
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 4.3e-21 105.1 142 45.8
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 4.3e-21 105.1 142 45.8
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 5.6e-21 104.8 146 43.2
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.2e-20 103.6 160 41.2
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 1.6e-20 103.2 139 45.3
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 1.2e-18 97.1 128 42.2
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 2.6e-18 95.9 151 41.7
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 1.3e-17 93.6 178 37.6
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 2.2e-17 92.8 143 42.0
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 3.7e-17 92.0 160 40.6
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 2.4e-16 89.4 118 44.9
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 7.0e-16 87.8 152 40.1
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.6e-15 86.7 99 47.5
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 1.6e-15 86.7 138 42.0
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.0e-14 84.0 117 43.6
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 1.1e-13 80.5 118 43.2
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 1.5e-13 80.1 111 42.3
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 2.5e-13 79.3 95 46.3
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 1.8e-11 73.2 62 61.3
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 2.3e-11 72.8 111 36.9
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 1.5e-10 70.1 62 58.1
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 4.4e-10 68.6 68 51.5
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 5.8e-10 68.2 73 50.7
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 2.9e-09 65.9 70 50.0
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.7e-09 65.5 59 52.5
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.9e-08 63.2 53 62.3
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 2.4e-08 62.8 74 51.4
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 3.2e-08 62.4 99 40.4
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 1.6e-07 60.1 106 39.6
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 1.3e-06 57.0 152 30.9


User provided reference genes

Program Settings