Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 5.5e-43 177.6 112 100.0
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 1.0e-36 156.8 112 82.1
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.4e-35 152.9 112 72.3
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 1.9e-35 152.5 112 71.4
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 6.7e-33 144.1 110 70.0
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.5e-32 142.9 112 71.4
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 2.6e-32 142.1 112 67.9
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 5.7e-32 141.0 109 78.0
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 7.4e-32 140.6 108 78.7
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 7.4e-32 140.6 112 80.4
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 1.3e-31 139.8 112 75.9
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 2.2e-31 139.0 109 75.2
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 8.2e-31 137.1 112 75.9
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 8.2e-31 137.1 112 75.0
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 81.2
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 81.2
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.1e-30 136.7 113 76.1
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 9.1e-30 133.7 112 74.1
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 9.1e-30 133.7 111 80.2
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 1.2e-29 133.3 112 79.5
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 2.0e-29 132.5 110 79.1
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 2.0e-29 132.5 111 60.4
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 2.6e-29 132.1 112 75.9
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.4e-29 131.7 111 73.9
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.4e-29 131.7 112 75.9
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 4.5e-29 131.3 112 75.9
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 5.9e-29 131.0 112 62.5
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 5.9e-29 131.0 112 62.5
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.0e-28 130.2 111 73.0
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 1.0e-28 130.2 112 75.0
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 1.3e-28 129.8 111 76.6
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.7e-28 129.4 112 75.0
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.9e-28 128.6 109 66.1
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 2.9e-28 128.6 112 74.1
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.9e-28 128.6 111 73.0
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 2.9e-28 128.6 111 63.1
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.8e-28 128.3 111 73.0
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.0e-28 127.9 112 69.6
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.0e-28 127.9 112 72.3
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 5.0e-28 127.9 112 76.8
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 8.5e-28 127.1 114 76.3
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 8.5e-28 127.1 114 76.3
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 8.5e-28 127.1 111 77.5
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 8.5e-28 127.1 110 73.6
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 1.4e-27 126.3 112 74.1
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.9e-27 125.9 112 72.3
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 1.9e-27 125.9 111 60.4
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 1.9e-27 125.9 111 71.2
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 2.5e-27 125.6 110 74.5
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 3.2e-27 125.2 113 75.2
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 3.2e-27 125.2 113 72.6
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 3.2e-27 125.2 109 73.4
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.2e-27 124.8 112 72.3
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 7.2e-27 124.0 113 73.5
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 9.4e-27 123.6 112 71.4
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 1.2e-26 123.2 113 77.9
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 2.7e-26 122.1 106 58.5
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 3.6e-26 121.7 110 72.7
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.6e-26 121.7 111 71.2
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 3.6e-26 121.7 116 69.8
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 4.7e-26 121.3 107 65.4
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 4.7e-26 121.3 112 69.6
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 6.1e-26 120.9 112 71.4
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 8.0e-26 120.6 112 70.5
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 8.0e-26 120.6 114 71.9
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 1.0e-25 120.2 110 70.9
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.0e-25 120.2 110 58.2
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 1.8e-25 119.4 113 68.1
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 2.3e-25 119.0 113 72.6
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 3.9e-25 118.2 115 66.1
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 3.9e-25 118.2 112 67.9
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 3.9e-25 118.2 106 71.7
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 5.2e-25 117.9 112 68.8
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 5.2e-25 117.9 112 68.8
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 6.7e-25 117.5 111 72.1
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 1.1e-24 116.7 109 72.5
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 2.6e-24 115.5 115 65.2
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 4.4e-24 114.8 112 70.5
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 5.7e-24 114.4 114 56.1
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 7.4e-24 114.0 108 64.8
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 6.3e-23 110.9 111 71.2
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 1.1e-22 110.2 123 63.4
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 7.0e-22 107.5 82 72.0
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.0e-21 105.9 96 62.5
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.5e-21 105.1 112 55.4
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.5e-21 104.8 113 49.6
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 5.9e-21 104.4 110 67.3
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.3e-20 103.2 84 82.1
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 2.2e-20 102.4 109 64.2
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 2.9e-20 102.1 83 78.3
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 6.5e-20 100.9 86 81.4
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 1.5e-19 99.8 109 66.1
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 5.5e-19 97.8 116 63.8
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 5.5e-19 97.8 112 52.7
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 7.2e-19 97.4 115 64.3
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 1.2e-18 96.7 113 64.6
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 2.1e-18 95.9 116 62.9
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 2.1e-18 95.9 106 65.1
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.7e-18 95.5 87 69.0
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 3.6e-18 95.1 108 58.3
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 8.0e-18 94.0 114 63.2
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 8.0e-18 94.0 114 63.2
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 3.0e-17 92.0 85 56.5
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 4.0e-17 91.7 206 36.9
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 5.2e-17 91.3 72 69.4
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 8.8e-17 90.5 112 63.4
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 2.0e-16 89.4 115 61.7
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 5.7e-16 87.8 113 48.7
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 7.5e-16 87.4 71 64.8
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 1.7e-15 86.3 88 54.5
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 1.7e-15 86.3 70 67.1
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 2.2e-15 85.9 88 71.6
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 2.2e-15 85.9 88 70.5
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 3.7e-15 85.1 101 68.3
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 4.8e-15 84.7 114 61.4
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 8.2e-15 84.0 83 73.5
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 1.1e-14 83.6 106 50.0
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.8e-14 82.8 70 64.3
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 2.4e-14 82.4 49 79.6
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 3.1e-14 82.0 73 57.5
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 4.1e-14 81.6 132 40.9
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 7.0e-14 80.9 87 69.0
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 1.3e-12 76.6 119 58.0
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.3e-12 76.6 84 48.8
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 8.5e-12 73.9 82 65.9
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 1.1e-11 73.6 106 60.4
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 1.1e-11 73.6 88 45.5
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.9e-11 72.8 89 50.6
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 2.5e-11 72.4 85 64.7
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 8.0e-10 67.4 96 39.6
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 2.3e-09 65.9 89 65.2
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 6.8e-09 64.3 57 59.6
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.0e-08 62.8 60 56.7
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 1.4e-06 56.6 61 50.8
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.8e-06 56.2 50 60.0
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.8e-06 56.2 50 60.0


User provided reference genes

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