Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03514 Selenicereus undatus HOM05D000949 ORTHO05D050916 5.8e-79 297.4 137 100.0
Hund03142 Selenicereus undatus HOM05D000949 ORTHO05D009565 1.1e-56 223.4 131 78.6
Hund03517 Selenicereus undatus HOM05D000949 ORTHO05D050916 3.1e-56 221.9 125 84.0
AUR62028830 Chenopodium quinoa HOM05D000949 ORTHO05D009565 4.4e-34 148.3 135 50.4
EL10Ac3g05918 Beta vulgaris HOM05D000949 ORTHO05D009565 5.2e-27 124.8 137 46.7
Haze_01335 Corylus avellana HOM05D000949 ORTHO05D009565 5.2e-27 124.8 137 44.5
Haze_01340 Corylus avellana HOM05D000949 ORTHO05D009565 5.2e-27 124.8 137 44.5
EL10Ac3g05543 Beta vulgaris HOM05D000949 ORTHO05D009565 8.8e-27 124.0 139 46.0
Cfa015282 Carpinus fangiana HOM05D000949 ORTHO05D009565 1.7e-25 119.8 137 43.1
COL.COLO4_34576 Corchorus olitorius HOM05D000949 ORTHO05D009565 2.8e-25 119.0 137 44.5
TAR362G0920 Trochodendron aralioides HOM05D000949 ORTHO05D009565 8.2e-25 117.5 137 41.6
TAR365G1047 Trochodendron aralioides HOM05D000949 ORTHO05D009565 1.1e-24 117.1 137 41.6
Gorai.005G068400 Gossypium raimondii HOM05D000949 ORTHO05D009565 2.4e-24 115.9 137 41.6
Potri.008G102500 Populus trichocarpa HOM05D000949 ORTHO05D009565 3.1e-24 115.5 137 43.1
CiPaw.01G135500 Carya illinoinensis HOM05D000949 ORTHO05D009565 5.3e-24 114.8 137 43.8
Gohir.A02G055700 Gossypium hirsutum HOM05D000949 ORTHO05D009565 5.3e-24 114.8 137 40.9
AUR62005731 Chenopodium quinoa HOM05D000949 ORTHO05D009565 7.0e-24 114.4 118 45.8
GSVIVG01034960001 Vitis vinifera HOM05D000949 ORTHO05D009565 7.0e-24 114.4 139 39.6
Ciclev10004938m.g Citrus clementina HOM05D000949 ORTHO05D009565 1.2e-23 113.6 137 44.5
TWI09G0276 Tripterygium wilfordii HOM05D000949 ORTHO05D009565 1.2e-23 113.6 137 43.1
Atru.chr4.3058 Acer truncatum HOM05D000949 ORTHO05D009565 1.6e-23 113.2 137 42.3
Manes.03G207200 Manihot esculenta HOM05D000949 ORTHO05D009565 2.6e-23 112.5 137 44.5
Gohir.D02G060800 Gossypium hirsutum HOM05D000949 ORTHO05D009565 5.9e-23 111.3 137 41.6
Ah.07g201600 Amaranthus hybridus HOM05D000949 ORTHO05D009565 1.7e-22 109.8 135 40.0
QL06p012857 Quercus lobata HOM05D000949 ORTHO05D009565 1.1e-21 107.1 139 40.3
Thecc.04G305100 Theobroma cacao HOM05D000949 ORTHO05D009565 1.1e-21 107.1 140 41.4
PSO357G0461 Papaver somniferum HOM05D000949 ORTHO05D009565 4.2e-21 105.1 138 39.1
AUR62032782 Chenopodium quinoa HOM05D000949 ORTHO05D009565 7.2e-21 104.4 137 43.1
MSTRG.10165 Avicennia marina HOM05D000949 ORTHO05D009565 1.2e-20 103.6 137 38.7
Cpa.g.sc9.23 Carica papaya HOM05D000949 ORTHO05D009565 1.2e-20 103.6 141 39.7
Hma1.2p1_0013F.1_g008290 Hydrangea macrophylla HOM05D000949 ORTHO05D009565 1.2e-20 103.6 124 44.4
MBI19_g03269_MAGBIO Magnolia biondii HOM05D000949 ORTHO05D009565 2.1e-20 102.8 138 38.4
Sp3g05500 Schrenkiella parvula HOM05D000949 ORTHO05D009565 2.1e-20 102.8 141 40.4
Sc13g0007150 Simmondsia chinensis HOM05D000949 ORTHO05D009565 2.7e-20 102.4 136 40.4
Lj6g0003299 Lotus japonicus HOM05D000949 ORTHO05D009565 4.7e-20 101.7 130 40.0
PSO170G2901 Papaver somniferum HOM05D000949 ORTHO05D009565 6.1e-20 101.3 138 37.7
Lalb_Chr20g0120731 Lupinus albus HOM05D000949 ORTHO05D009565 8.0e-20 100.9 131 41.2
CAN.G40.10 Capsicum annuum HOM05D000185 ORTHO05D000105 1.4e-19 100.1 137 38.7
Rhsim04G0241500 Rhododendron simsii HOM05D000949 ORTHO05D009565 1.4e-19 100.1 104 48.1
Hund11989 Selenicereus undatus HOM05D000949 ORTHO05D009565 3.0e-19 99.0 91 53.8
BraA05t22868Z Brassica rapa HOM05D000949 ORTHO05D009565 6.8e-19 97.8 143 37.8
Lalb_Chr15g0089121 Lupinus albus HOM05D000949 ORTHO05D009565 1.5e-18 96.7 132 37.1
Cc03_g00580 Coffea canephora HOM05D000949 ORTHO05D009565 2.0e-18 96.3 134 39.6
Nitab4.5_0002294g0110 Nicotiana tabacum HOM05D000949 ORTHO05D009565 2.0e-18 96.3 132 38.6
vmacro07950 Vaccinium macrocarpon HOM05D000949 ORTHO05D009565 2.0e-18 96.3 111 48.6
Aa31LG5G17110 Aethionema arabicum HOM05D000949 ORTHO05D009565 4.4e-18 95.1 140 37.9
C05p60670 Brassica napus HOM05D000949 ORTHO05D009565 5.7e-18 94.7 142 37.3
BolC5t34727H Brassica oleracea HOM05D000949 ORTHO05D009565 5.7e-18 94.7 142 37.3
AL3G17600 Arabidopsis lyrata HOM05D000949 ORTHO05D009565 9.7e-18 94.0 141 37.6
A05p41480 Brassica napus HOM05D000949 ORTHO05D009565 9.7e-18 94.0 143 36.4
THA.LOC104818875 Tarenaya hassleriana HOM05D000949 ORTHO05D009565 1.3e-17 93.6 138 37.7
Carub.0003s0603 Capsella rubella HOM05D000949 ORTHO05D009565 2.2e-17 92.8 144 38.2
arahy.Tifrunner.gnm1.ann1.7IYA67 Arachis hypogaea HOM05D000949 ORTHO05D009565 2.8e-17 92.4 137 37.2
arahy.Tifrunner.gnm1.ann1.UM9WQL Arachis hypogaea HOM05D000949 ORTHO05D009565 2.8e-17 92.4 137 37.2
Peaxi162Scf01160g00149 Petunia axillaris HOM05D000949 ORTHO05D009565 4.8e-17 91.7 132 39.4
Peaxi162Scf00228g00621 Petunia axillaris HOM05D000949 ORTHO05D009565 6.3e-17 91.3 131 35.9
Solyc12g099180.3 Solanum lycopersicum HOM05D000949 ORTHO05D009565 6.3e-17 91.3 134 36.6
CiPaw.01G135700 Carya illinoinensis HOM05D000949 ORTHO05D009565 1.1e-16 90.5 137 40.9
AT3G06560 Arabidopsis thaliana HOM05D000949 ORTHO05D009565 2.4e-16 89.4 141 35.5
Sopen12g033860 Solanum pennellii HOM05D000949 ORTHO05D009565 3.1e-16 89.0 134 35.1
Actinidia18472 Actinidia chinensis HOM05D000949 ORTHO05D009565 5.3e-16 88.2 110 42.7
CARHR081110 Cardamine hirsuta HOM05D000949 ORTHO05D009565 9.1e-16 87.4 142 37.3
Actinidia31565 Actinidia chinensis HOM05D000949 ORTHO05D009565 1.2e-15 87.0 109 41.3
Ca_17170_v3 Cicer arietinum L. HOM05D000949 ORTHO05D009565 2.0e-15 86.3 119 38.7
CAN.G484.70 Capsicum annuum HOM05D000949 ORTHO05D009565 2.7e-15 85.9 134 36.6
AUR62016239 Chenopodium quinoa HOM05D000949 ORTHO05D009565 7.7e-15 84.3 121 38.8
PGSC0003DMG400004615 Solanum tuberosum HOM05D000949 ORTHO05D009565 1.0e-14 84.0 125 35.2
SGA_v2.0_scaffold157G37337 Striga asiatica HOM05D000949 ORTHO05D009565 1.7e-14 83.2 94 45.7
Solyc01g058260.4 Solanum lycopersicum HOM05D000949 ORTHO05D009565 5.0e-14 81.6 96 44.8
HanXRQChr09g0250471 Helianthus annuus HOM05D000949 ORTHO05D009565 8.5e-14 80.9 137 34.3
CSS0042580 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D009565 2.5e-13 79.3 99 40.4
PGSC0003DMG400029059 Solanum tuberosum HOM05D000949 ORTHO05D009565 2.5e-13 79.3 96 43.8
ECA246G5275 Erigeron canadensis HOM05D000949 ORTHO05D009565 4.2e-13 78.6 137 33.6
Sopen01g023750 Solanum pennellii HOM05D000949 ORTHO05D009565 1.6e-12 76.6 96 43.8
Lalb_Chr18g0058591 Lupinus albus HOM05D000949 ORTHO05D009565 2.7e-12 75.9 130 33.1
Lsat_1_v5_gn_6_341 Lactuca sativa HOM05D000949 ORTHO05D009565 1.8e-11 73.2 88 42.0
HanXRQChr13g0394751 Helianthus annuus HOM05D000949 ORTHO05D009565 8.8e-11 70.9 99 37.4
SEGI_36137 Sequoiadendron giganteum HOM05D000949 ORTHO05D009565 2.0e-10 69.7 140 30.0
Lj6C694G3 Lonicera japonica HOM05D000949 ORTHO05D009565 3.4e-10 68.9 135 28.9
Phvul.006G119900 Phaseolus vulgaris HOM05D000949 ORTHO05D009565 2.2e-09 66.2 96 36.5
VMungo0540G1062 Vigna mungo HOM05D000949 ORTHO05D009565 3.7e-09 65.5 93 37.6
Zm00001eb331120 Zea mays HOM05D000949 ORTHO05D009565 8.3e-09 64.3 84 41.7
Zm00001eb015030 Zea mays HOM05D000949 ORTHO05D009565 2.4e-08 62.8 102 35.3
Os03g0313300 Oryza sativa ssp. japonica HOM05D000949 ORTHO05D009565 5.4e-08 61.6 100 36.0
Zm00001eb395840 Zea mays HOM05D000949 ORTHO05D009565 7.0e-08 61.2 100 37.0
Gohir.D02G060900 Gossypium hirsutum HOM05D000949 ORTHO05D009565 9.1e-08 60.8 84 36.9
Gorai.005G068500 Gossypium raimondii HOM05D000949 ORTHO05D009565 9.1e-08 60.8 84 36.9
Nn3g21776 Nelumbo nucifera HOM05D000949 ORTHO05D009565 1.2e-07 60.5 56 46.4
Ca_23267_v3 Cicer arietinum L. HOM05D000949 ORTHO05D001276 1.0e-06 57.4 146 29.5
Ca_23276_v3 Cicer arietinum L. HOM05D000949 ORTHO05D001276 1.0e-06 57.4 146 29.5
Dinv44261 Davidia involucrata HOM05D000949 ORTHO05D009565 8.6e-06 54.3 34 61.8
Migut.I00957 Erythranthe guttata HOM05D000949 ORTHO05D001276 8.6e-06 54.3 139 29.5


User provided reference genes

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