Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01991 Selenicereus undatus HOM05D003917 ORTHO05D005104 1.7e-97 359.4 187 100.0
Sc16g0006040 Simmondsia chinensis HOM05D003917 ORTHO05D005104 1.5e-82 309.7 187 82.9
Ah.06g186000 Amaranthus hybridus HOM05D003917 ORTHO05D005104 4.5e-82 308.1 188 83.5
AUR62015777 Chenopodium quinoa HOM05D003917 ORTHO05D005104 5.9e-82 307.8 187 82.4
AUR62020441 Chenopodium quinoa HOM05D003917 ORTHO05D005104 3.8e-81 305.1 189 82.0
EL10Ac4g07805 Beta vulgaris HOM05D003917 ORTHO05D005104 9.4e-80 300.4 187 81.3
arahy.Tifrunner.gnm1.ann1.ZCST78 Arachis hypogaea HOM05D003917 ORTHO05D005104 3.9e-78 295.0 188 80.3
arahy.Tifrunner.gnm1.ann1.YBSA71 Arachis hypogaea HOM05D003917 ORTHO05D005104 2.0e-77 292.7 188 79.8
TAR626G1684 Trochodendron aralioides HOM05D003917 ORTHO05D005104 7.4e-77 290.8 187 78.6
CSS0021043 Camellia sinensis var. sinensis HOM05D003917 ORTHO05D005104 1.8e-75 286.2 189 79.9
Glyma.08G316200 Glycine max HOM05D003917 ORTHO05D005104 3.1e-75 285.4 186 79.6
GSVIVG01037650001 Vitis vinifera HOM05D003917 ORTHO05D005104 3.1e-75 285.4 189 78.8
CsaV3_3G005080 Cucumis sativus L. HOM05D003917 ORTHO05D005104 4.1e-75 285.0 188 79.3
Hma1.2p1_0673F.1_g201365 Hydrangea macrophylla HOM05D003917 ORTHO05D005104 4.1e-75 285.0 192 78.6
Hma1.2p1_0673F.1_g201370 Hydrangea macrophylla HOM05D003917 ORTHO05D005104 4.1e-75 285.0 192 78.6
CiPaw.12G129800 Carya illinoinensis HOM05D003917 ORTHO05D005104 6.9e-75 284.3 188 77.7
PGR083G1099 Punica granatum HOM05D003917 ORTHO05D005104 6.9e-75 284.3 188 79.3
ClCG10G005360 Citrullus lanatus HOM05D003917 ORTHO05D005104 9.1e-75 283.9 188 78.2
QL08p010140 Quercus lobata HOM05D003917 ORTHO05D005104 1.5e-74 283.1 186 78.5
Prupe.4G213500 Prunus persica HOM05D003917 ORTHO05D005104 2.0e-74 282.7 188 77.7
Migut.H01827 Erythranthe guttata HOM05D003917 ORTHO05D005104 3.4e-74 282.0 189 79.4
Cfa020343 Carpinus fangiana HOM05D003917 ORTHO05D005104 4.5e-74 281.6 192 76.6
MD11G1217800 Malus domestica HOM05D003917 ORTHO05D005104 4.5e-74 281.6 188 79.8
MD03G1200800 Malus domestica HOM05D003917 ORTHO05D005104 1.0e-73 280.4 188 78.2
RhsimUnG0250500 Rhododendron simsii HOM05D003917 ORTHO05D005104 1.3e-73 280.0 190 77.4
Cc05_g13680 Coffea canephora HOM05D003917 ORTHO05D005104 2.9e-73 278.9 189 78.3
Glyma.18G096900 Glycine max HOM05D003917 ORTHO05D005104 2.9e-73 278.9 188 77.7
Duzib213G0954 Durio zibethinus HOM05D003917 ORTHO05D005104 3.8e-73 278.5 186 77.4
Ca_01713_v3 Cicer arietinum L. HOM05D003917 ORTHO05D005104 1.1e-72 276.9 186 75.3
Gohir.D13G142900 Gossypium hirsutum HOM05D003917 ORTHO05D005104 1.1e-72 276.9 186 78.5
CANSAT01G2526 Cannabis sativa HOM05D003917 ORTHO05D005104 1.4e-72 276.6 190 77.4
Gohir.A13G138100 Gossypium hirsutum HOM05D003917 ORTHO05D005104 4.2e-72 275.0 186 78.0
FvH4_3g22680 Fragaria vesca HOM05D003917 ORTHO05D005104 5.5e-72 274.6 188 76.1
FAN21G1759 Fragaria x ananassa HOM05D003917 ORTHO05D005104 5.5e-72 274.6 188 76.1
FAN25G1034 Fragaria x ananassa HOM05D003917 ORTHO05D005104 5.5e-72 274.6 188 76.1
ECA240G3908 Erigeron canadensis HOM05D003917 ORTHO05D005104 7.2e-72 274.2 194 75.8
PSO832G0061 Papaver somniferum HOM05D003917 ORTHO05D005104 7.2e-72 274.2 188 76.1
Lalb_Chr15g0081161 Lupinus albus HOM05D003917 ORTHO05D005104 9.4e-72 273.9 188 76.6
Phvul.006G043400 Phaseolus vulgaris HOM05D003917 ORTHO05D005104 9.4e-72 273.9 186 75.8
vmacro09714 Vaccinium macrocarpon HOM05D003917 ORTHO05D005104 9.4e-72 273.9 192 75.5
VMungo0647G2080 Vigna mungo HOM05D003917 ORTHO05D005104 9.4e-72 273.9 187 75.4
Thecc.07G036800 Theobroma cacao HOM05D003917 ORTHO05D005104 2.1e-71 272.7 186 77.4
MBI18_g14473_MAGBIO Magnolia biondii HOM05D003917 ORTHO05D005104 3.6e-71 271.9 192 74.0
CSS0032620 Camellia sinensis var. sinensis HOM05D003917 ORTHO05D005104 1.0e-70 270.4 189 74.6
VMungo0540G1915 Vigna mungo HOM05D003917 ORTHO05D005104 1.0e-70 270.4 186 75.3
Gorai.013G159800 Gossypium raimondii HOM05D003917 ORTHO05D005104 1.4e-70 270.0 193 75.6
Atru.chr2.3409 Acer truncatum HOM05D003917 ORTHO05D005104 1.8e-70 269.6 189 76.2
DCAR_016705 Daucus carota HOM05D003917 ORTHO05D005104 1.8e-70 269.6 190 76.3
Medtr3g051740 Medicago truncatula HOM05D003917 ORTHO05D005104 2.3e-70 269.2 187 73.8
Glyma.14G023600 Glycine max HOM05D003917 ORTHO05D005104 3.9e-70 268.5 187 74.3
Eucgr.L03176 Eucalyptus grandis HOM05D003917 ORTHO05D005104 5.1e-70 268.1 190 74.7
PSO210G5830 Papaver somniferum HOM05D003917 ORTHO05D005104 5.1e-70 268.1 188 74.5
Lj6g0025956 Lotus japonicus HOM05D003917 ORTHO05D005104 6.7e-70 267.7 185 76.2
Eucgr.F00763 Eucalyptus grandis HOM05D003917 ORTHO05D005104 1.5e-69 266.5 190 74.2
COL.COLO4_09663 Corchorus olitorius HOM05D003917 ORTHO05D005104 2.0e-69 266.2 186 75.8
MSTRG.14435 Avicennia marina HOM05D003917 ORTHO05D005104 2.6e-69 265.8 189 75.1
Peaxi162Scf00834g00044 Petunia axillaris HOM05D003917 ORTHO05D005104 3.3e-69 265.4 189 76.7
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 7.4e-69 264.2 172 79.1
Lsat_1_v5_gn_5_3940 Lactuca sativa HOM05D003917 ORTHO05D005104 7.4e-69 264.2 183 76.0
HanXRQChr03g0076521 Helianthus annuus HOM05D003917 ORTHO05D005104 1.3e-68 263.5 194 76.8
PGSC0003DMG400014388 Solanum tuberosum HOM05D003917 ORTHO05D005104 1.3e-68 263.5 189 72.5
RcHm_v2.0_Chr5g0039491 Rosa chinensis HOM05D003917 ORTHO05D005104 2.2e-68 262.7 189 75.1
Solyc10g006290.3 Solanum lycopersicum HOM05D003917 ORTHO05D005104 2.2e-68 262.7 189 72.5
Sopen10g002240 Solanum pennellii HOM05D003917 ORTHO05D005104 2.8e-68 262.3 189 72.5
Lalb_Chr20g0113861 Lupinus albus HOM05D003917 ORTHO05D005104 3.7e-68 261.9 186 75.3
Sed0004226 Sechium edule HOM05D003917 ORTHO05D005104 4.8e-68 261.5 177 76.3
Manes.15G071800 Manihot esculenta HOM05D003917 ORTHO05D005104 8.2e-68 260.8 189 74.6
SGA_v2.0_scaffold8G04319 Striga asiatica HOM05D003917 ORTHO05D005104 8.2e-68 260.8 189 73.5
Psat5g178840 Pisum sativum HOM05D003917 ORTHO05D005104 1.1e-67 260.4 186 71.0
MD11G1218500 Malus domestica HOM05D003917 ORTHO05D005104 2.4e-67 259.2 188 73.4
Nitab4.5_0004829g0030 Nicotiana tabacum HOM05D003917 ORTHO05D005104 2.4e-67 259.2 204 67.2
Aa31LG8G7200 Aethionema arabicum HOM05D003917 ORTHO05D005104 3.1e-67 258.8 190 73.7
Ciclev10009443m.g Citrus clementina HOM05D003917 ORTHO05D005104 3.1e-67 258.8 215 64.7
Carub.0003s2033 Capsella rubella HOM05D003917 ORTHO05D005104 4.1e-67 258.5 190 75.3
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 9.1e-67 257.3 169 78.7
Dinv40754 Davidia involucrata HOM05D003917 ORTHO05D005104 1.5e-66 256.5 184 72.3
ECA246G4209 Erigeron canadensis HOM05D003917 ORTHO05D005104 1.5e-66 256.5 184 77.2
TWI39G1026 Tripterygium wilfordii HOM05D003917 ORTHO05D005104 1.5e-66 256.5 188 73.4
Thhalv10021595m.g Eutrema salsugineum HOM05D003917 ORTHO05D005104 7.7e-66 254.2 190 72.6
AT3G20390 Arabidopsis thaliana HOM05D003917 ORTHO05D005104 2.9e-65 252.3 190 73.2
Sp3g18400 Schrenkiella parvula HOM05D003917 ORTHO05D005104 2.9e-65 252.3 190 72.6
AL3G34100 Arabidopsis lyrata HOM05D003917 ORTHO05D005104 5.0e-65 251.5 190 73.2
A05p28510 Brassica napus HOM05D003917 ORTHO05D005104 8.5e-65 250.8 191 73.3
unitig_22.g6623 Utricularia gibba HOM05D001290 ORTHO05D001180 1.5e-64 250.0 188 71.8
BcaC05g28323 Brassica carinata HOM05D003917 ORTHO05D005104 2.5e-64 249.2 191 72.8
C05p43960 Brassica napus HOM05D003917 ORTHO05D005104 2.5e-64 249.2 191 72.8
BolC5t33114H Brassica oleracea HOM05D003917 ORTHO05D005104 2.5e-64 249.2 191 72.8
LjContig00272g0007438 Lotus japonicus HOM05D003917 ORTHO05D005104 2.5e-64 249.2 187 71.1
BcaB06g26102 Brassica carinata HOM05D003917 ORTHO05D005104 3.2e-64 248.8 192 73.4
BcaB06g26104 Brassica carinata HOM05D003917 ORTHO05D005104 3.2e-64 248.8 192 73.4
CARHR096100 Cardamine hirsuta HOM05D003917 ORTHO05D005104 4.2e-64 248.4 190 72.1
HanXRQChr05g0159361 Helianthus annuus HOM05D003917 ORTHO05D005104 5.5e-64 248.1 180 75.6
Nn1g03531 Nelumbo nucifera HOM05D003917 ORTHO05D005104 5.5e-64 248.1 226 61.1
Medtr5g092740 Medicago truncatula HOM05D003917 ORTHO05D005104 7.2e-64 247.7 190 71.1
Potri.001G435700 Populus trichocarpa HOM05D003917 ORTHO05D005104 1.2e-63 246.9 189 68.8
CAN.G1781.2 Capsicum annuum HOM05D003917 ORTHO05D005104 1.8e-62 243.0 161 78.3
Potri.011G139600 Populus trichocarpa HOM05D003917 ORTHO05D005104 3.0e-62 242.3 189 68.3
HPP92_004132 Vanilla planifolia HOM05D003917 ORTHO05D005104 4.0e-62 241.9 193 67.9
unitig_8.g3276 Utricularia gibba HOM05D003917 ORTHO05D005104 5.2e-62 241.5 188 70.2
Duzib093G2089 Durio zibethinus HOM05D003917 ORTHO05D005104 6.7e-62 241.1 186 70.4
THA.LOC104816925 Tarenaya hassleriana HOM05D003917 ORTHO05D005104 2.6e-61 239.2 191 71.2
TPR.G1217 Trifolium pratense HOM05D003917 ORTHO05D005104 1.1e-59 233.8 180 70.6
Lalb_Chr17g0348491 Lupinus albus HOM05D003917 ORTHO05D005104 3.1e-59 232.3 184 68.5
Oeu005531.1 Olea europaea HOM05D003917 ORTHO05D005104 4.1e-59 231.9 187 69.5
Psat2g010880 Pisum sativum HOM05D003917 ORTHO05D005104 7.0e-59 231.1 188 67.0
Sabra16G0289800 Salix brachista HOM05D003917 ORTHO05D005104 1.6e-58 229.9 217 60.4
CDE11G0283 Ceratophyllum demersum HOM05D000789 ORTHO05D005104 2.2e-57 226.1 159 76.1
BcaB04g19109 Brassica carinata HOM05D003917 ORTHO05D005104 6.5e-57 224.6 157 77.1
BcaB04g20655 Brassica carinata HOM05D003917 ORTHO05D005104 6.5e-57 224.6 197 62.9
Aqoxy1G03502 Aquilegia oxysepala HOM05D003917 ORTHO05D005104 1.5e-56 223.4 200 62.0
Nitab4.5_0001393g0140 Nicotiana tabacum HOM05D003917 ORTHO05D005104 1.5e-56 223.4 188 63.8
Os07g0516200 Oryza sativa ssp. japonica HOM05D003917 ORTHO05D005104 1.5e-56 223.4 187 66.8
A03p41760 Brassica napus HOM05D003917 ORTHO05D005104 4.2e-56 221.9 143 81.1
C03p51140 Brassica napus HOM05D003917 ORTHO05D005104 4.2e-56 221.9 143 81.8
BraA03t13329Z Brassica rapa HOM05D003917 ORTHO05D005104 4.2e-56 221.9 143 81.1
FAN11G2833 Fragaria x ananassa HOM05D003917 ORTHO05D005104 1.2e-55 220.3 157 72.6
Haze_09691 Corylus avellana HOM05D003917 ORTHO05D005104 3.6e-55 218.8 126 87.3
QL08p010146 Quercus lobata HOM05D003917 ORTHO05D005104 4.7e-55 218.4 127 85.0
BcaC01g03555 Brassica carinata HOM05D003917 ORTHO05D005104 1.0e-54 217.2 146 80.1
CiPaw.11G189400 Carya illinoinensis HOM05D003917 ORTHO05D005104 1.4e-54 216.9 188 64.4
Lj8C169T22 Lonicera japonica HOM05D003917 ORTHO05D005104 2.3e-54 216.1 205 60.5
Oeu007580.1 Olea europaea HOM05D003917 ORTHO05D005104 2.3e-54 216.1 125 88.8
Lsat_1_v5_gn_9_93900 Lactuca sativa HOM05D003917 ORTHO05D005104 3.0e-54 215.7 155 73.5
BolC1t04332H Brassica oleracea HOM05D003917 ORTHO05D005104 5.2e-54 214.9 195 63.1
Lj1A872G53 Lonicera japonica HOM05D003917 ORTHO05D005104 2.6e-53 212.6 190 66.3
Sabra11G0125600 Salix brachista HOM05D003917 ORTHO05D005104 3.4e-53 212.2 124 87.1
Zm00001eb322650 Zea mays HOM05D003917 ORTHO05D005104 4.4e-53 211.8 176 66.5
BcaC09g48993 Brassica carinata HOM05D003917 ORTHO05D005104 2.2e-52 209.5 197 60.4
SMO144G0016 Selaginella moellendorffii HOM05D003917 ORTHO05D005104 4.8e-52 208.4 125 85.6
MELO3C031909.2 Cucumis melo HOM05D003917 ORTHO05D005104 5.4e-51 204.9 147 78.9
Duzib093G1470 Durio zibethinus HOM05D003917 ORTHO05D005104 5.4e-51 204.9 155 68.4
Duzib093G1533 Durio zibethinus HOM05D003917 ORTHO05D005104 7.0e-51 204.5 155 68.4
AagrBONN_evm.TU.Sc2ySwM_117.1972 Anthoceros agrestis HOM05D003917 ORTHO05D005104 2.7e-50 202.6 151 72.2
BraA01t03528Z Brassica rapa HOM05D003917 ORTHO05D005104 3.5e-50 202.2 152 71.7
C01p43730 Brassica napus HOM05D003917 ORTHO05D005104 5.9e-50 201.4 152 71.7
A01p34300 Brassica napus HOM05D003917 ORTHO05D005104 7.7e-50 201.1 152 71.7
Solyc07g064600.3 Solanum lycopersicum HOM05D003917 ORTHO05D005104 7.7e-50 201.1 177 59.9
Mapoly0108s0009 Marchantia polymorpha HOM05D003917 ORTHO05D005104 2.9e-49 199.1 132 75.8
PGSC0003DMG400022217 Solanum tuberosum HOM05D003917 ORTHO05D005104 3.8e-49 198.7 177 59.3
Sopen07g032790 Solanum pennellii HOM05D003917 ORTHO05D005104 6.5e-49 198.0 174 60.3
Pp3c13_21770 Physcomitrium patens HOM05D003917 ORTHO05D005104 1.1e-48 197.2 124 79.0
Glyma.02G291100 Glycine max HOM05D003917 ORTHO05D005104 9.4e-48 194.1 139 70.5
A01p34290 Brassica napus HOM05D003917 ORTHO05D005104 1.8e-46 189.9 196 56.1
CBR_g32332 Chara braunii HOM05D003917 ORTHO05D005104 4.5e-42 175.3 125 69.6
Sed0024585 Sechium edule HOM05D003917 ORTHO05D005104 1.7e-41 173.3 192 53.6
MELO3C025369.2 Cucumis melo HOM05D003917 ORTHO05D005104 8.6e-41 171.0 144 62.5
CsaV3_3G005070 Cucumis sativus L. HOM05D003917 ORTHO05D005104 3.6e-39 165.6 188 50.5
ClCG10G005350 Citrullus lanatus HOM05D003917 ORTHO05D005104 6.1e-39 164.9 193 49.7
MCO11G845 Micromonas commoda HOM05D003917 ORTHO05D005104 8.0e-39 164.5 124 66.1
Sed0017343 Sechium edule HOM05D003917 ORTHO05D005104 3.0e-38 162.5 188 52.7
Phvul.008G266800 Phaseolus vulgaris HOM05D003917 ORTHO05D005104 4.4e-37 158.7 138 60.1
PRCOL_00004025 Prasinoderma coloniale HOM05D003917 ORTHO05D005104 3.7e-36 155.6 127 59.8
Cre16.g669650 Chlamydomonas reinhardtii HOM05D003917 ORTHO05D005104 3.2e-35 152.5 128 60.9
ATR0776G085 Amborella trichopoda HOM05D003917 ORTHO05D005104 2.0e-34 149.8 160 53.8
Oeu042771.1 Olea europaea HOM05D003917 ORTHO05D005104 2.3e-33 146.4 124 65.3
BcaC05g28324 Brassica carinata HOM05D000399 ORTHO05D000304 1.9e-32 143.3 96 79.2
FAN16G0616 Fragaria x ananassa HOM05D003917 ORTHO05D005104 3.3e-32 142.5 110 68.2
BraA01t03527Z Brassica rapa HOM05D003917 ORTHO05D005104 1.6e-31 140.2 151 54.3
ATR0794G030 Amborella trichopoda HOM05D003917 ORTHO05D005104 4.7e-31 138.7 177 45.8
BcaC01g01693 Brassica carinata HOM05D003917 ORTHO05D005104 4.0e-30 135.6 77 88.3
ATR0794G138 Amborella trichopoda HOM05D003917 ORTHO05D005104 1.3e-28 130.6 102 60.8
FAN16G0676 Fragaria x ananassa HOM05D003917 ORTHO05D005104 3.0e-25 119.4 69 87.0
Gorai.002G088600 Gossypium raimondii HOM05D003917 ORTHO05D005104 3.3e-24 115.9 68 86.8
Gohir.D01G066600 Gossypium hirsutum HOM05D003917 ORTHO05D005104 1.2e-23 114.0 68 85.3
CBR_g3731 Chara braunii HOM05D003917 ORTHO05D028724 5.4e-19 98.6 91 59.3
AUR62006502 Chenopodium quinoa HOM05D003917 ORTHO05D024981 2.1e-18 96.7 57 82.5
C01p43720 Brassica napus HOM05D003917 ORTHO05D005104 2.7e-18 96.3 125 48.0
AUR62016539 Chenopodium quinoa HOM05D003917 ORTHO05D024981 3.5e-18 95.9 54 85.2
BolC1t04330H Brassica oleracea HOM05D003917 ORTHO05D005104 4.6e-18 95.5 125 48.0
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 2.3e-17 93.2 79 58.2
SGA_v2.0_scaffold698G53480 Striga asiatica HOM05D003917 ORTHO05D024981 5.1e-17 92.0 69 69.6
SGA_v2.0_scaffold31G12886 Striga asiatica HOM05D003917 ORTHO05D024981 1.1e-16 90.9 69 68.1
Pp3s32_520 Physcomitrium patens HOM05D003917 ORTHO05D309786 2.5e-16 89.7 124 41.1
Oeu021198.1 Olea europaea HOM05D003917 ORTHO05D005104 4.7e-15 85.5 47 87.2
Aa31LG8G10060 Aethionema arabicum HOM05D002406 ORTHO05D007964 1.1e-11 74.3 102 50.0
BcaC05g26491 Brassica carinata HOM05D003917 ORTHO05D001048 1.6e-07 60.5 50 62.0
BolC6t38526H Brassica oleracea HOM05D003917 ORTHO05D001048 1.6e-07 60.5 57 56.1
C05p25410 Brassica napus HOM05D003917 ORTHO05D001048 2.8e-07 59.7 57 56.1
BolC6t39957H Brassica oleracea HOM05D003917 ORTHO05D001048 4.0e-06 55.8 57 52.6
RcHm_v2.0_Chr5g0039481 Rosa chinensis HOM05D003917 ORTHO05D347315 5.2e-06 55.5 31 87.1


User provided reference genes

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