Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 0.0e+00 1781.1 1026 100.0
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 0.0e+00 1137.9 1008 69.6
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 0.0e+00 1108.6 1007 69.1
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 2.0e-304 1049.3 1022 66.4
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 9.1e-302 1040.4 981 66.6
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.3e-292 1010.0 1048 62.7
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 1.8e-289 999.6 1029 63.6
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 9.1e-286 987.3 1020 64.5
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 5.9e-285 984.6 1041 63.9
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 7.7e-285 984.2 1015 62.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 1.0e-284 983.8 1018 62.9
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 4.7e-282 974.9 1018 61.9
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 3.0e-281 972.2 1016 62.8
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 6.3e-279 964.5 1038 61.5
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 2.3e-276 956.1 1063 59.4
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 5.0e-276 954.9 1040 61.4
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 2.6e-272 942.6 1019 61.5
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 3.4e-272 942.2 1011 61.7
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.2e-269 933.7 1075 58.0
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 7.8e-269 931.0 1031 60.6
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 5.6e-267 924.9 1037 59.6
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 5.6e-267 924.9 1025 59.6
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.6e-266 923.3 1024 58.7
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 4.7e-266 921.8 1048 59.2
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 6.1e-266 921.4 1022 61.2
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.8e-265 919.8 1050 60.0
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.8e-265 919.8 1076 57.6
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 2.3e-265 919.5 1020 61.1
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 3.0e-265 919.1 1025 60.0
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 2.6e-264 916.0 1027 59.8
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 5.8e-264 914.8 1008 60.3
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 2.2e-263 912.9 1014 60.4
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 4.9e-263 911.8 768 73.0
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 8.3e-263 911.0 1060 57.4
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 1.1e-262 910.6 1099 57.7
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 2.4e-262 909.4 1029 58.9
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.0e-261 906.4 1022 59.8
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 4.6e-261 905.2 1048 58.5
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 6.0e-261 904.8 1019 59.8
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 7.8e-261 904.4 1027 59.3
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.0e-260 904.0 1195 54.3
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 1.0e-260 904.0 1029 60.1
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.3e-260 903.7 1024 59.1
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 3.0e-260 902.5 1022 59.3
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 3.0e-260 902.5 1021 60.5
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.0e-260 902.5 1018 60.0
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.5e-259 900.2 1008 58.7
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 2.5e-259 899.4 1037 57.5
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 2.5e-259 899.4 1031 58.2
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 7.3e-259 897.9 1013 59.9
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 1.2e-258 897.1 1025 59.0
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.6e-258 895.6 1075 57.5
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 4.7e-258 895.2 1039 57.6
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 4.0e-257 892.1 1015 59.2
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 2.6e-256 889.4 1013 58.1
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 3.4e-256 889.0 1035 58.5
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 3.4e-256 889.0 1015 57.2
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 3.4e-256 889.0 1012 58.5
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.4e-256 888.6 1074 57.1
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 5.8e-256 888.3 1033 58.1
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 9.8e-256 887.5 1038 59.5
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.2e-255 886.3 1084 56.6
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.2e-255 886.3 1014 59.2
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 1.9e-254 883.2 1006 58.6
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 2.4e-254 882.9 1015 58.7
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 5.4e-254 881.7 1064 56.9
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 2.7e-253 879.4 1025 58.2
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 1.0e-252 877.5 1060 57.2
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.3e-252 877.1 1043 56.6
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 5.6e-251 871.7 1001 57.4
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-249 867.5 1014 57.7
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 3.1e-249 865.9 1005 57.1
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.2e-248 864.0 1052 56.7
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.3e-247 860.5 1108 54.8
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 1.3e-247 860.5 1034 57.1
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 3.7e-247 859.0 1051 56.3
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 2.4e-246 856.3 1014 55.9
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 5.4e-246 855.1 1063 56.1
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 9.2e-246 854.4 1016 58.1
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 1.7e-244 850.1 1023 56.5
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.7e-244 850.1 1086 55.8
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 2.3e-244 849.7 1010 56.2
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 2.3e-244 849.7 1012 59.4
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-243 847.4 1010 56.7
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.1e-243 847.4 1043 55.0
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.1e-243 847.4 1078 53.8
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.5e-243 846.3 1056 56.8
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 4.3e-243 845.5 1015 57.8
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 8.1e-242 841.3 1061 55.6
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 8.1e-242 841.3 1036 56.5
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.4e-241 840.5 1036 56.0
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 8.9e-241 837.8 1050 55.4
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 2.0e-240 836.6 1050 54.9
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 4.4e-240 835.5 1051 55.3
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 9.9e-240 834.3 1047 55.3
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.7e-239 833.6 1064 55.0
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 2.2e-239 833.2 1168 50.3
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 6.4e-239 831.6 1042 55.9
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.1e-238 830.9 1024 55.7
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.4e-238 830.5 1059 55.9
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.3e-236 823.9 1051 54.5
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 1.5e-235 820.5 1048 54.5
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.3e-235 819.3 1016 56.4
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 2.0e-232 810.1 1183 49.2
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 8.4e-231 804.7 1053 54.7
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 3.9e-228 795.8 1011 55.6
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 1.4e-225 787.3 1007 55.5
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 5.8e-224 781.9 1044 52.5
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 2.1e-221 773.5 1021 53.1
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.9e-219 766.9 1034 54.4
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 1.8e-217 760.4 1020 54.1
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 2.0e-216 756.9 1071 49.8
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.5e-214 750.0 1015 51.7
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 7.1e-214 748.4 1008 52.3
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 3.0e-212 743.0 1012 52.5
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 6.2e-210 735.3 1045 52.8
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.8e-204 717.2 1071 48.4
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 3.7e-194 682.9 1022 49.5
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 1.0e-183 648.3 1106 46.0
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 5.5e-174 615.9 504 75.6
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.4e-164 584.7 1027 43.0
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.5e-163 581.3 917 47.7
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 8.9e-156 555.4 1022 43.2
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 2.8e-149 533.9 576 61.6
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 6.8e-148 529.3 798 48.2
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 9.8e-147 525.4 759 50.2
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 6.2e-125 453.0 993 38.8
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 3.8e-114 417.2 416 62.5
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 3.5e-104 384.0 1050 34.8
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 1.0e-71 276.2 503 44.7
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 1.0e-71 276.2 454 44.7
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 2.4e-52 211.8 359 46.5
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 1.6e-51 209.1 165 71.5
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.8e-47 195.7 194 60.8
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.6e-46 191.8 342 44.7
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 4.4e-46 191.0 164 69.5
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 9.8e-38 163.3 351 36.8
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 1.1e-36 159.8 804 27.7
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 1.1e-36 159.8 488 32.0
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 4.3e-33 147.9 173 58.4
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 9.5e-33 146.7 399 36.8
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 4.0e-31 141.4 90 84.4
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 2.0e-30 139.0 386 33.9
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 1.7e-29 136.0 120 68.3
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 8.3e-29 133.7 429 32.9
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 1.4e-28 132.9 87 82.8
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.1e-28 131.3 256 42.6
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 5.4e-28 131.0 88 75.0
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 9.2e-28 130.2 438 31.1
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.1e-25 123.2 100 72.0
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 9.5e-25 120.2 392 34.4
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.8e-24 118.6 250 40.4
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.1e-23 116.7 99 69.7
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 5.2e-23 114.4 151 51.7
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 6.4e-21 107.5 380 29.7
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 1.6e-19 102.8 714 25.1
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.6e-19 102.8 106 58.5
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 3.5e-19 101.7 63 85.7
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 1.7e-18 99.4 74 77.0
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-17 96.7 111 55.0
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.1e-17 96.7 656 24.2
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 1.9e-17 95.9 140 45.7
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 3.3e-17 95.1 112 57.1
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 1.6e-16 92.8 81 65.4
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.8e-15 89.4 103 55.3
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 5.2e-15 87.8 73 71.2
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 1.2e-14 86.7 822 25.3
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 9.9e-14 83.6 60 76.7
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.7e-11 75.5 97 52.6
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 3.5e-11 75.1 72 65.3
EL10Ac6g13433 Beta vulgaris HOM05D000200 ORTHO05D000262 4.6e-11 74.7 48 75.0
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 8.6e-10 70.5 51 72.5
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 8.6e-10 70.5 51 72.5
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 9.6e-09 67.0 62 62.9
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 2.4e-07 62.4 45 68.9
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.1e-07 62.0 306 26.8
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 3.1e-07 62.0 79 50.6
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 7.6e-06 57.4 71 52.1


User provided reference genes

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