Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0703F.1_g206520 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.3e-88 329.7 167 100.0
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 9.5e-84 313.5 158 100.0
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 1.4e-58 229.9 163 74.8
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 3.4e-57 225.3 161 72.0
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 7.1e-55 217.6 158 69.6
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 8.7e-53 210.7 158 64.6
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.5e-52 209.9 161 64.6
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 3.3e-52 208.8 158 65.2
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 7.4e-52 207.6 160 63.8
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 4.8e-51 204.9 158 62.7
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 1.1e-50 203.8 158 63.9
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 3.1e-50 202.2 160 66.9
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 6.9e-50 201.1 158 62.0
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 9.0e-50 200.7 158 64.6
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 5.8e-49 198.0 168 58.9
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 7.6e-49 197.6 164 61.6
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 1.0e-48 197.2 164 62.2
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 2.2e-48 196.1 179 55.9
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 2.9e-48 195.7 158 61.4
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 6.5e-48 194.5 160 61.2
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.1e-47 193.7 158 61.4
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 1.1e-47 193.7 158 60.1
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 2.5e-47 192.6 158 60.8
FAN06G2580 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.5e-47 192.6 158 60.8
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.5e-47 192.6 158 60.8
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 2.5e-47 192.6 164 60.4
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 4.2e-47 191.8 165 59.4
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 5.5e-47 191.4 158 60.8
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 7.1e-47 191.0 162 61.7
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 9.3e-47 190.7 164 59.8
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 1.6e-46 189.9 158 60.1
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 1.6e-46 189.9 160 56.9
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 3.5e-46 188.7 159 58.5
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 4.6e-46 188.3 164 57.3
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 6.0e-46 188.0 162 58.0
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 6.0e-46 188.0 161 60.2
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.0e-45 187.2 144 64.6
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 1.0e-45 187.2 158 58.2
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.0e-45 187.2 161 59.6
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 2.3e-45 186.0 160 58.8
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 3.9e-45 185.3 160 61.9
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 5.1e-45 184.9 160 61.2
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 6.7e-45 184.5 159 56.6
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.1e-44 183.7 158 60.1
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 1.1e-44 183.7 159 58.5
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 1.9e-44 183.0 159 54.7
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.9e-44 183.0 158 59.5
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 2.5e-44 182.6 159 54.7
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.5e-44 182.6 162 58.0
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 4.3e-44 181.8 158 54.4
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 5.7e-44 181.4 130 65.4
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 9.7e-44 180.6 172 55.8
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 9.7e-44 180.6 138 63.0
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 1.3e-43 180.3 159 54.7
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 1.6e-43 179.9 162 59.3
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.2e-43 179.5 178 51.1
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 2.2e-43 179.5 160 59.4
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 2.2e-43 179.5 180 50.0
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.8e-43 179.1 167 52.7
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 3.7e-43 178.7 158 55.1
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 3.7e-43 178.7 158 56.3
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 4.8e-43 178.3 159 54.1
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 6.3e-43 177.9 161 60.2
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 8.2e-43 177.6 158 56.3
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 1.1e-42 177.2 159 54.7
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 1.8e-42 176.4 181 50.8
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 4.1e-42 175.3 137 62.0
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 6.9e-42 174.5 159 53.5
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 6.9e-42 174.5 166 55.4
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.2e-41 173.7 158 58.2
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 2.6e-41 172.6 158 53.8
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 5.9e-41 171.4 130 62.3
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 7.6e-41 171.0 135 59.3
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 1.7e-40 169.9 135 60.7
Glyma.18G028167 Glycine max HOM05D005539 ORTHO05D006644 3.8e-40 168.7 160 55.6
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 1.1e-39 167.2 144 57.6
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 2.5e-39 166.0 143 58.0
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 3.2e-39 165.6 146 58.9
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 4.2e-39 165.2 175 48.6
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 4.2e-39 165.2 137 59.1
Solyc11g020160.2 Solanum lycopersicum HOM05D005539 ORTHO05D006644 9.3e-39 164.1 130 60.8
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 3.6e-38 162.2 159 54.1
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 4.6e-38 161.8 158 49.4
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 6.1e-38 161.4 142 56.3
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 3.0e-37 159.1 166 54.2
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 8.8e-37 157.5 175 48.6
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 1.9e-36 156.4 144 56.2
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.7e-36 154.8 98 72.4
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 7.4e-36 154.5 108 61.1
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 7.4e-36 154.5 161 55.3
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 1.8e-34 149.8 183 48.1
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 4.1e-34 148.7 145 52.4
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 6.9e-34 147.9 145 52.4
MD07G1221200 Malus domestica HOM05D005539 ORTHO05D006644 1.7e-27 126.7 152 48.7
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 2.2e-27 126.3 146 46.6
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 4.8e-27 125.2 107 57.9
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 2.1e-22 109.8 72 75.0
CDE04G3215 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 2.8e-19 99.4 140 37.9
SHI03444 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-19 99.0 113 44.2
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 5.0e-16 88.6 143 36.4
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 3.6e-14 82.4 133 32.3
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 8.0e-14 81.3 161 37.9
SEGI_03850 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 2.3e-13 79.7 159 30.2
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 1.3e-11 73.9 98 38.8
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 4.7e-06 55.5 110 31.8


User provided reference genes

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