Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.6e-116 421.0 222 100.0
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 6.7e-85 317.8 173 98.3
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 8.5e-72 274.2 167 89.8
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 8.5e-72 274.2 167 89.8
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 4.2e-63 245.4 167 78.4
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 1.6e-62 243.4 167 79.0
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 2.7e-62 242.7 167 76.6
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 6.1e-62 241.5 167 79.0
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 8.0e-62 241.1 167 77.2
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 2.3e-61 239.6 167 77.2
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 4.0e-61 238.8 167 76.6
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 3.4e-60 235.7 167 74.9
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 5.7e-60 235.0 167 74.9
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 9.8e-60 234.2 167 73.7
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 8.3e-59 231.1 167 73.1
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 1.1e-58 230.7 167 72.5
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 4.1e-58 228.8 167 73.7
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 7.0e-58 228.0 167 73.1
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 9.2e-58 227.6 167 73.1
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 9.2e-58 227.6 167 71.9
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.2e-57 227.3 167 71.9
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.2e-57 227.3 167 71.9
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.2e-57 227.3 167 71.9
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 1.2e-57 227.3 167 73.1
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 1.2e-57 227.3 167 73.1
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.6e-57 226.9 167 71.3
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 2.0e-57 226.5 167 73.1
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 2.0e-57 226.5 167 71.3
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 2.0e-57 226.5 167 72.5
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 2.0e-57 226.5 168 72.6
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 2.9e-56 222.6 167 70.7
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 5.0e-56 221.9 167 69.5
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 1.1e-55 220.7 167 68.3
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.9e-55 219.9 167 69.5
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 1.9e-55 219.9 167 70.1
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 1.9e-55 219.9 167 69.5
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 2.5e-55 219.5 167 71.3
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 2.5e-55 219.5 167 71.3
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 3.3e-55 219.2 167 70.1
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 5.6e-55 218.4 168 71.4
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 9.5e-55 217.6 167 68.9
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 1.2e-54 217.2 167 72.5
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 2.1e-54 216.5 167 68.3
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 2.1e-54 216.5 167 69.5
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 3.6e-54 215.7 167 67.7
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 1.0e-53 214.2 167 67.1
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 1.0e-53 214.2 167 68.9
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 1.4e-53 213.8 167 68.3
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 4.0e-53 212.2 167 67.7
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 6.8e-53 211.5 167 67.7
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 8.9e-53 211.1 167 65.9
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 8.9e-53 211.1 169 68.0
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 8.9e-53 211.1 167 68.9
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 2.0e-52 209.9 167 67.1
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 4.4e-52 208.8 167 67.7
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 5.7e-52 208.4 167 66.5
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 1.7e-51 206.8 167 65.9
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 1.7e-51 206.8 167 65.9
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 1.7e-51 206.8 167 67.1
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 1.7e-51 206.8 167 67.1
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 2.2e-51 206.5 167 67.1
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 2.9e-51 206.1 167 65.3
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 3.7e-51 205.7 167 66.5
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 4.9e-51 205.3 167 64.7
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 4.9e-51 205.3 167 69.5
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 6.4e-51 204.9 167 64.7
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 6.4e-51 204.9 167 65.3
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 1.1e-50 204.1 168 64.9
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 2.4e-50 203.0 168 66.7
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 3.2e-50 202.6 168 64.9
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 3.2e-50 202.6 167 65.3
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 4.1e-50 202.2 168 64.9
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 5.4e-50 201.8 167 62.9
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 7.0e-50 201.4 169 63.3
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 7.0e-50 201.4 167 64.1
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 9.2e-50 201.1 168 64.3
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 1.2e-49 200.7 168 64.3
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 1.6e-49 200.3 167 61.7
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 3.5e-49 199.1 167 61.7
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 3.5e-49 199.1 168 63.7
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 7.8e-49 198.0 167 64.1
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 1.0e-48 197.6 168 63.1
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 5.0e-48 195.3 167 64.1
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 5.0e-48 195.3 167 63.5
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.1e-47 194.1 135 73.3
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 1.5e-47 193.7 168 63.7
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 1.9e-47 193.4 167 63.5
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 9.5e-47 191.0 197 54.8
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 9.5e-47 191.0 163 62.0
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 1.2e-46 190.7 149 69.8
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 1.2e-46 190.7 163 62.0
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 1.6e-46 190.3 167 63.5
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 6.8e-45 184.9 147 66.7
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 1.2e-44 184.1 130 73.1
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 1.2e-44 184.1 135 71.9
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 9.2e-42 174.5 168 58.9
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 1.2e-41 174.1 121 71.9
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 5.6e-39 165.2 167 55.1
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 2.1e-38 163.3 170 55.3
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 6.8e-37 158.3 136 62.5
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 8.3e-35 151.4 167 52.1
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 5.1e-32 142.1 143 57.3
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 2.5e-31 139.8 174 47.7
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 4.7e-30 135.6 101 64.4
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 1.1e-29 134.4 168 48.2
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 7.6e-28 128.3 136 50.0
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 5.4e-26 122.1 170 48.2
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.2e-25 120.9 171 42.7
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 1.6e-14 84.0 146 39.0
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.4e-10 70.9 181 31.5
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 1.3e-06 57.8 184 32.6


User provided reference genes

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