Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.6e-264 915.6 472 100.0
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.1e-184 649.4 477 71.5
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 1.2e-168 597.0 475 66.3
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 3.6e-152 542.3 476 61.8
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.7e-138 496.9 476 57.8
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.9e-137 493.4 463 57.9
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 1.6e-136 490.3 477 54.7
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 2.1e-136 490.0 484 55.8
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.2e-134 484.2 463 56.4
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 5.7e-134 481.9 471 58.4
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 3.7e-133 479.2 493 53.1
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 4.1e-132 475.7 482 55.4
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 9.1e-132 474.6 465 55.9
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 3.5e-131 472.6 474 55.7
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 2.3e-130 469.9 484 54.8
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 3.8e-130 469.2 473 55.8
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.6e-128 463.8 473 54.3
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 2.8e-128 463.0 474 55.1
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 4.7e-128 462.2 475 54.7
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.8e-127 460.3 473 54.5
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 3.0e-127 459.5 471 55.6
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.6e-126 456.4 456 55.5
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.2e-125 453.4 473 53.5
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.1e-124 451.1 463 52.7
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 2.4e-124 449.9 470 52.6
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 4.1e-124 449.1 466 54.5
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 3.5e-123 446.0 467 54.6
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 4.5e-123 445.7 469 54.4
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.0e-122 444.5 479 53.7
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 4.3e-121 439.1 464 53.9
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 9.5e-121 438.0 471 52.7
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 3.6e-120 436.0 476 51.9
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.0e-119 432.6 479 51.6
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 8.9e-119 431.4 478 50.6
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 1.2e-118 431.0 416 57.5
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.2e-118 431.0 469 53.1
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 2.0e-118 430.3 463 51.6
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 4.4e-118 429.1 469 52.0
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 7.5e-118 428.3 482 51.0
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.7e-117 427.2 468 50.9
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.4e-116 422.2 470 51.5
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.0e-115 420.2 458 51.5
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.0e-114 417.9 476 48.5
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 4.3e-113 412.5 471 48.6
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 5.6e-113 412.1 458 51.5
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 2.1e-112 410.2 468 50.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 8.0e-112 408.3 469 51.4
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.4e-111 407.5 471 48.2
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.2e-111 405.6 473 50.3
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 8.9e-111 404.8 474 47.5
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 8.9e-111 404.8 473 49.9
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 4.4e-110 402.5 470 50.0
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.3e-109 401.0 466 48.5
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 2.9e-109 399.8 467 47.8
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 3.2e-108 396.4 472 48.9
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 3.2e-108 396.4 471 49.3
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 3.2e-108 396.4 444 49.5
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 5.4e-108 395.6 465 49.5
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 9.2e-108 394.8 462 47.0
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.6e-107 394.0 449 49.2
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.7e-106 390.6 358 59.2
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.1e-106 389.0 480 48.5
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 1.5e-105 387.5 466 49.6
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.6e-104 384.0 438 49.8
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.6e-104 384.0 445 49.7
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 2.1e-104 383.6 481 48.2
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 2.8e-104 383.3 464 48.1
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-103 379.4 459 46.2
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 2.0e-102 377.1 465 45.8
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 4.4e-102 375.9 461 46.9
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.1e-100 371.3 430 47.9
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 3.2e-100 369.8 463 48.2
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 1.6e-99 367.5 465 47.1
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 6.0e-99 365.5 460 45.4
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 7.8e-99 365.2 460 44.6
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.3e-98 364.4 465 45.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.3e-98 364.4 460 45.9
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.1e-97 361.3 414 49.5
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.5e-97 360.9 460 45.0
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.9e-97 360.5 460 44.6
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 5.6e-97 359.0 460 45.0
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 2.8e-96 356.7 460 44.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 3.6e-96 356.3 461 44.3
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.8e-95 354.0 460 43.7
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.8e-95 354.0 440 45.7
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 4.0e-95 352.8 464 45.3
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.9e-93 346.7 465 43.0
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 4.2e-92 342.8 485 42.1
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 2.1e-91 340.5 347 53.9
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 7.8e-91 338.6 461 42.7
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 2.8e-88 330.1 460 42.8
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 4.2e-84 316.2 350 50.3
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.6e-83 314.3 308 57.1
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 1.6e-80 304.3 474 41.6
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.1e-79 301.6 299 55.9
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 3.8e-77 293.1 330 49.4
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.3e-72 278.1 462 38.5
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.2e-62 245.0 336 42.0
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.5e-57 228.0 182 59.9
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 2.8e-48 197.2 369 36.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 4.8e-32 143.3 155 46.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 2.6e-30 137.5 225 38.7
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 5.9e-30 136.3 495 27.3
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.0e-29 135.6 132 51.5
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 2.9e-29 134.0 196 40.8
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 8.5e-29 132.5 132 50.8
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 8.5e-29 132.5 132 50.8
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 4.7e-27 126.7 256 34.0
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-23 115.5 119 50.4
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.6e-22 111.7 165 36.4
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.6e-22 111.7 165 36.4
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.3e-21 108.6 89 64.0
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.7e-21 108.2 427 27.6
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.1e-20 105.5 142 47.9
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 5.5e-20 103.2 129 45.7
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 5.7e-17 93.2 78 60.3
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 3.7e-16 90.5 416 25.7
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.0e-14 84.7 121 38.0
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 2.5e-12 77.8 431 23.7
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 7.2e-12 76.3 55 61.8
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 4.7e-11 73.6 64 60.9
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.3e-10 71.2 179 33.5
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 3.2e-07 60.8 36 77.8
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 5.4e-07 60.1 78 39.7
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.7e-06 57.8 110 34.5


User provided reference genes

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