Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0096F.1_g047830 Hydrangea macrophylla HOM05D005236 ORTHO05D006557 7.3e-43 176.8 87 100.0
Dinv14429 Davidia involucrata HOM05D005236 ORTHO05D006557 2.9e-23 111.7 77 72.7
Lj3C872G3 Lonicera japonica HOM05D005236 ORTHO05D006557 1.1e-22 109.8 79 70.9
Prupe.1G325100 Prunus persica HOM05D005236 ORTHO05D006557 8.6e-20 100.1 85 62.4
TAR622G0787 Trochodendron aralioides HOM05D005236 ORTHO05D006557 1.9e-19 99.0 77 66.2
GSVIVG01011753001 Vitis vinifera HOM05D005236 ORTHO05D006557 2.5e-19 98.6 77 68.8
CSS0043470 Camellia sinensis var. sinensis HOM05D005236 ORTHO05D006557 4.3e-19 97.8 77 61.0
Duzib251G0654 Durio zibethinus HOM05D005236 ORTHO05D006557 9.5e-19 96.7 73 65.8
Gorai.005G161600 Gossypium raimondii HOM05D005236 ORTHO05D006557 9.5e-19 96.7 77 62.3
Thecc.02G282100 Theobroma cacao HOM05D005236 ORTHO05D006557 2.1e-18 95.5 77 63.6
Gohir.A03G121000 Gossypium hirsutum HOM05D005236 ORTHO05D006557 3.6e-18 94.7 74 62.2
Peaxi162Scf00159g00077 Petunia axillaris HOM05D005236 ORTHO05D006557 6.2e-18 94.0 80 58.8
Nitab4.5_0000742g0190 Nicotiana tabacum HOM05D005236 ORTHO05D006557 1.4e-17 92.8 77 61.0
Gohir.D02G144400 Gossypium hirsutum HOM05D005236 ORTHO05D006557 2.4e-17 92.0 77 59.7
PGSC0003DMG401030493 Solanum tuberosum HOM05D005236 ORTHO05D006557 2.4e-17 92.0 75 58.7
Rhsim09G0066800 Rhododendron simsii HOM05D005236 ORTHO05D006557 5.2e-17 90.9 73 60.3
RcHm_v2.0_Chr4g0441331 Rosa chinensis HOM05D005236 ORTHO05D006557 6.8e-17 90.5 77 59.7
FvH4_4g32470 Fragaria vesca HOM05D005236 ORTHO05D006557 1.2e-16 89.7 77 58.4
COL.COLO4_20490 Corchorus olitorius HOM05D000651 ORTHO05D003435 2.0e-16 89.0 68 66.2
FAN17G1995 Fragaria x ananassa HOM05D005236 ORTHO05D006557 2.6e-16 88.6 77 57.1
FAN22G1445 Fragaria x ananassa HOM05D005236 ORTHO05D006557 3.4e-16 88.2 77 58.4
Sopen05g003880 Solanum pennellii HOM05D005236 ORTHO05D006557 7.6e-16 87.0 73 53.4
MBI10_g08556_MAGBIO Magnolia biondii HOM05D005236 ORTHO05D006557 9.9e-16 86.7 76 59.2
MD13G1025100 Malus domestica HOM05D005236 ORTHO05D006557 2.2e-15 85.5 77 57.1
MD16G1027600 Malus domestica HOM05D005236 ORTHO05D006557 2.9e-15 85.1 87 52.9
Sc14g0007110 Simmondsia chinensis HOM05D005236 ORTHO05D006557 2.9e-15 85.1 75 60.0
Aqoxy3G00124 Aquilegia oxysepala HOM05D005236 ORTHO05D006557 3.8e-15 84.7 77 58.4
TWI79G0143 Tripterygium wilfordii HOM05D005236 ORTHO05D006557 3.2e-14 81.6 77 54.5
CAN.G1298.25 Capsicum annuum HOM05D005236 ORTHO05D006557 7.1e-14 80.5 73 56.2
ATR0598G134 Amborella trichopoda HOM05D005236 ORTHO05D006557 7.8e-13 77.0 80 48.8
CANSAT64G0788 Cannabis sativa HOM05D005236 ORTHO05D006557 1.0e-12 76.6 84 45.2
FAN12G1300 Fragaria x ananassa HOM05D005236 ORTHO05D006557 1.0e-12 76.6 64 57.8
Cc11_g08660 Coffea canephora HOM05D005236 ORTHO05D006557 5.1e-12 74.3 78 48.7
Manes.15G127900 Manihot esculenta HOM05D005236 ORTHO05D006557 8.7e-12 73.6 79 53.2
EL10Ac6g14212 Beta vulgaris HOM05D005236 ORTHO05D006557 4.3e-11 71.2 67 55.2
AUR62038508 Chenopodium quinoa HOM05D005236 ORTHO05D006557 9.6e-11 70.1 68 48.5
Hund24974 Selenicereus undatus HOM05D005236 ORTHO05D006557 4.8e-10 67.8 63 55.6
Migut.L00644 Erythranthe guttata HOM05D005236 ORTHO05D006557 1.4e-09 66.2 72 45.8
Migut.L00833 Erythranthe guttata HOM05D005236 ORTHO05D006557 1.4e-09 66.2 72 45.8
MSTRG.7621 Avicennia marina HOM05D005236 ORTHO05D006557 1.8e-09 65.9 66 53.0
DCAR_007297 Daucus carota HOM05D005236 ORTHO05D006557 2.4e-09 65.5 48 70.8
SalBow8G3693 Salvia bowleyana HOM05D005236 ORTHO05D006557 4.0e-09 64.7 71 45.1
SalBow8G4798 Salvia bowleyana HOM05D005236 ORTHO05D006557 4.0e-09 64.7 71 45.1
PSO017G4096 Papaver somniferum HOM05D005236 ORTHO05D006557 5.3e-09 64.3 73 46.6
Sp2g12880 Schrenkiella parvula HOM05D005236 ORTHO05D006557 6.9e-09 63.9 77 46.8
Ah.03g137280 Amaranthus hybridus HOM05D005236 ORTHO05D006557 9.0e-09 63.5 74 45.9
Psat6g043400 Pisum sativum HOM05D005236 ORTHO05D006557 7.6e-08 60.5 60 50.0
AT2G01440 Arabidopsis thaliana HOM05D005236 ORTHO05D006557 9.9e-08 60.1 85 37.6
CARHR143960 Cardamine hirsuta HOM05D005236 ORTHO05D006557 9.9e-08 60.1 77 41.6
Carub.0005s0040 Capsella rubella HOM05D005236 ORTHO05D006557 1.3e-07 59.7 77 39.0
Medtr1g031140 Medicago truncatula HOM05D005236 ORTHO05D006557 1.3e-07 59.7 64 45.3
Aa31LG2G8500 Aethionema arabicum HOM05D005236 ORTHO05D006557 2.9e-07 58.5 81 40.7
Thhalv10000760m.g Eutrema salsugineum HOM05D005236 ORTHO05D006557 3.8e-07 58.2 86 39.5
AL5G10420 Arabidopsis lyrata HOM05D005236 ORTHO05D006557 3.2e-06 55.1 77 41.6
BcaC06g34177 Brassica carinata HOM05D005236 ORTHO05D006557 4.2e-06 54.7 78 41.0
A06p44440 Brassica napus HOM05D005236 ORTHO05D006557 4.2e-06 54.7 78 41.0
C07p31870 Brassica napus HOM05D005236 ORTHO05D006557 4.2e-06 54.7 78 41.0
BolC7t43733H Brassica oleracea HOM05D005236 ORTHO05D006557 4.2e-06 54.7 78 41.0
BraA06t27318Z Brassica rapa HOM05D005236 ORTHO05D006557 4.2e-06 54.7 78 41.0
TPR.G36938 Trifolium pratense HOM05D005236 ORTHO05D006557 5.4e-06 54.3 78 38.5


User provided reference genes

Program Settings