Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 4.2e-63 244.6 128 100.0
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 7.6e-57 223.8 128 91.4
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 2.2e-56 222.2 129 89.9
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 2.9e-56 221.9 127 90.6
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 4.9e-56 221.1 129 90.7
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.2e-55 218.0 129 89.1
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.2e-55 218.0 129 89.1
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.2e-55 218.0 129 87.6
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.2e-55 218.0 129 87.6
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 7.1e-55 217.2 127 87.4
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 9.3e-55 216.9 131 87.0
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 9.3e-55 216.9 129 87.6
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 1.6e-54 216.1 129 86.8
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 2.1e-54 215.7 129 87.6
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 4.6e-54 214.5 129 87.6
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 1.8e-53 212.6 127 86.6
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 5.1e-53 211.1 129 83.7
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 5.1e-53 211.1 126 86.5
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 5.1e-53 211.1 126 86.5
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 5.1e-53 211.1 126 86.5
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 6.7e-53 210.7 125 87.2
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 2.5e-52 208.8 127 84.3
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 4.3e-52 208.0 129 83.7
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 5.7e-52 207.6 129 83.7
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 1.6e-51 206.1 127 84.3
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 2.1e-51 205.7 130 84.6
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 2.1e-51 205.7 127 83.5
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 2.8e-51 205.3 126 84.9
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 3.7e-51 204.9 127 84.3
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.8e-51 204.5 127 82.7
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 4.8e-51 204.5 127 81.9
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 6.2e-51 204.1 131 84.7
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 8.2e-51 203.8 147 76.2
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.8e-50 202.6 125 83.2
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 2.4e-50 202.2 129 82.2
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 4.1e-50 201.4 127 82.7
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 9.0e-50 200.3 125 82.4
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 9.0e-50 200.3 127 80.3
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 1.5e-49 199.5 130 83.1
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 2.0e-49 199.1 122 83.6
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 2.0e-49 199.1 121 84.3
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 2.0e-49 199.1 121 82.6
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 3.4e-49 198.4 122 82.0
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 5.8e-49 197.6 122 83.6
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 5.8e-49 197.6 131 77.9
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 7.6e-49 197.2 130 81.5
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 1.3e-48 196.4 134 76.9
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 1.7e-48 196.1 124 80.6
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 2.2e-48 195.7 128 81.2
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 2.2e-48 195.7 131 77.1
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.8e-48 194.9 128 81.2
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 6.5e-48 194.1 124 80.6
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 8.4e-48 193.7 130 81.5
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 1.1e-47 193.4 116 82.8
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 1.4e-47 193.0 124 79.8
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 1.4e-47 193.0 124 79.8
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.9e-47 192.6 116 81.9
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 2.5e-47 192.2 116 84.5
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.2e-47 191.4 127 80.3
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 4.2e-47 191.4 131 76.3
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 5.5e-47 191.0 128 78.9
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 1.2e-46 189.9 116 81.9
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.2e-46 189.9 116 81.9
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 1.2e-46 189.9 138 74.6
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 1.6e-46 189.5 119 80.7
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 2.1e-46 189.1 127 79.5
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 2.1e-46 189.1 122 79.5
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 2.1e-46 189.1 124 76.6
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 2.1e-46 189.1 116 81.0
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 2.7e-46 188.7 126 79.4
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 3.5e-46 188.3 125 72.8
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 6.1e-46 187.6 118 79.7
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 7.9e-46 187.2 123 77.2
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 7.9e-46 187.2 125 76.8
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 7.9e-46 187.2 125 76.8
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 1.3e-45 186.4 119 79.0
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 1.3e-45 186.4 128 76.6
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 2.3e-45 185.7 122 77.0
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 3.0e-45 185.3 125 78.4
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 5.1e-45 184.5 125 74.4
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 5.1e-45 184.5 124 75.8
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 5.1e-45 184.5 159 66.0
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 6.7e-45 184.1 131 74.8
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 1.5e-44 183.0 107 86.0
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 3.3e-44 181.8 128 76.6
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 5.7e-44 181.0 118 76.3
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 9.7e-44 180.3 115 79.1
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 1.3e-43 179.9 107 84.1
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 1.6e-43 179.5 125 74.4
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 1.6e-43 179.5 132 68.9
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 2.2e-43 179.1 125 72.0
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 2.2e-43 179.1 132 69.7
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 2.8e-43 178.7 129 73.6
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 2.8e-43 178.7 130 73.1
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 1.8e-42 176.0 122 72.1
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 4.1e-42 174.9 128 71.1
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 5.3e-42 174.5 100 85.0
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 2.0e-41 172.6 129 70.5
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 2.6e-41 172.2 123 72.4
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 5.9e-41 171.0 128 70.3
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.0e-40 170.2 155 63.9
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 1.9e-39 166.0 126 66.7
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 1.6e-38 162.9 125 65.6
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 1.6e-38 162.9 125 65.6
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 1.6e-38 162.9 125 65.6
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 2.1e-38 162.5 128 61.7
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 2.7e-38 162.2 120 67.5
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 2.7e-38 162.2 159 56.6
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 4.6e-38 161.4 115 69.6
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 4.6e-38 161.4 115 69.6
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 4.6e-38 161.4 120 70.0
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 6.1e-38 161.0 122 67.2
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 7.9e-38 160.6 123 66.7
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 7.9e-38 160.6 120 68.3
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 7.9e-38 160.6 121 67.8
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 1.0e-37 160.2 126 65.9
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 1.4e-37 159.8 100 76.0
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 1.4e-37 159.8 120 70.8
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 3.0e-37 158.7 110 70.9
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 3.0e-37 158.7 95 84.2
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 5.1e-37 157.9 125 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.1e-36 156.8 109 68.8
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.0e-36 156.0 114 65.8
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 2.0e-36 156.0 119 68.1
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.5e-36 155.6 109 67.9
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 2.5e-36 155.6 113 69.0
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 3.3e-36 155.2 110 66.4
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.3e-36 154.8 92 84.8
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 9.7e-36 153.7 94 81.9
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 9.7e-36 153.7 111 65.8
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 2.2e-35 152.5 125 70.4
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 3.7e-35 151.8 102 75.5
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 4.8e-35 151.4 162 53.7
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 5.3e-34 147.9 87 82.8
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 1.5e-33 146.4 91 81.3
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 3.4e-33 145.2 91 78.0
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 7.7e-33 144.1 101 68.3
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 5.0e-32 141.4 82 90.2
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 4.2e-31 138.3 119 64.7
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 2.1e-30 136.0 116 59.5
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 4.7e-30 134.8 119 63.0
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 1.5e-28 129.8 83 83.1
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 2.4e-26 122.5 126 56.3
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 2.0e-25 119.4 132 53.0
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 1.7e-24 116.3 63 84.1
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 4.7e-22 108.2 89 60.7
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 6.1e-22 107.8 76 68.4
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 6.1e-22 107.8 69 76.8
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 4.0e-21 105.1 95 57.9
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 6.7e-21 104.4 115 47.8
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 5.7e-20 101.3 61 85.2
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 5.3e-18 94.7 52 90.4
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 1.6e-17 93.2 116 50.9
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 2.2e-16 89.4 103 40.8
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 1.9e-15 86.3 89 47.2
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 5.5e-15 84.7 114 43.0
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 9.8e-12 73.9 50 70.0
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 2.4e-10 69.3 45 73.3
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 7.7e-09 64.3 93 33.3
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.5e-07 59.3 35 85.7


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