Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 0.0e+00 1445.6 703 100.0
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 2.3e-139 500.4 715 40.0
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 5.2e-139 499.2 714 40.3
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 1.5e-138 497.7 694 40.5
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 2.0e-138 497.3 724 39.6
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 5.7e-138 495.7 715 39.6
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 9.7e-138 495.0 714 39.1
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 3.7e-137 493.0 729 39.4
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 8.2e-137 491.9 700 39.3
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 2.4e-136 490.3 730 39.3
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 3.1e-136 490.0 717 39.2
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 3.1e-136 490.0 730 39.5
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 1.6e-135 487.6 717 39.2
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 1.6e-135 487.6 696 39.7
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 2.0e-135 487.3 713 38.7
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 2.0e-135 487.3 694 40.3
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 2.7e-135 486.9 719 39.2
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 4.5e-135 486.1 720 38.8
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.9e-135 485.7 726 38.6
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.0e-134 485.0 698 39.5
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 1.0e-134 485.0 723 38.9
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 1.0e-134 485.0 702 40.0
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 1.7e-134 484.2 722 38.8
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 3.8e-134 483.0 717 38.9
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 5.0e-134 482.6 694 39.5
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 5.0e-134 482.6 699 39.3
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 8.5e-134 481.9 718 39.1
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 1.5e-133 481.1 720 39.0
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.9e-133 480.7 719 38.7
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 4.2e-133 479.6 712 38.9
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 4.2e-133 479.6 724 39.2
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 4.2e-133 479.6 726 38.8
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 7.2e-133 478.8 727 38.7
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 7.2e-133 478.8 722 38.4
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 7.2e-133 478.8 702 39.6
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 9.4e-133 478.4 703 38.7
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 9.4e-133 478.4 718 39.0
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 9.4e-133 478.4 716 39.4
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.6e-132 477.6 714 39.2
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 2.1e-132 477.2 724 38.7
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 2.7e-132 476.9 689 38.5
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 2.7e-132 476.9 727 38.5
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 4.7e-132 476.1 722 38.9
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 6.1e-132 475.7 715 37.9
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 6.1e-132 475.7 722 38.4
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 8.0e-132 475.3 719 38.9
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 1.0e-131 474.9 702 39.0
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.4e-131 474.6 722 39.1
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 1.4e-131 474.6 699 38.1
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 2.3e-131 473.8 726 38.8
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 2.3e-131 473.8 716 38.8
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 3.0e-131 473.4 702 39.0
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 4.0e-131 473.0 712 38.5
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.2e-131 472.6 707 38.9
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 5.2e-131 472.6 719 38.1
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 8.8e-131 471.9 721 38.7
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 8.8e-131 471.9 722 39.1
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 1.2e-130 471.5 716 38.7
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 1.5e-130 471.1 712 38.5
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 2.0e-130 470.7 697 39.2
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 7.5e-130 468.8 724 38.7
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 1.3e-129 468.0 736 37.9
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 1.3e-129 468.0 729 38.3
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 6.3e-129 465.7 722 38.5
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 1.4e-128 464.5 722 38.2
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.4e-128 464.5 704 39.1
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 2.4e-128 463.8 720 38.2
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 2.4e-128 463.8 702 38.3
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 3.1e-128 463.4 730 38.9
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.1e-128 463.4 721 37.7
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 4.1e-128 463.0 706 39.0
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 4.1e-128 463.0 730 38.2
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 7.0e-128 462.2 737 37.4
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 7.0e-128 462.2 724 39.1
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 9.1e-128 461.8 720 37.5
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 9.1e-128 461.8 702 38.3
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 1.2e-127 461.5 699 37.8
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 1.2e-127 461.5 707 38.9
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 4.5e-127 459.5 722 38.4
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 1.0e-126 458.4 702 38.2
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 4.7e-124 449.5 628 41.2
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 3.0e-123 446.8 672 38.4
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 2.2e-121 440.7 727 36.5
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 2.2e-121 440.7 720 36.4
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 4.9e-121 439.5 738 37.3
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 8.3e-121 438.7 712 36.1
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 1.4e-120 438.0 752 35.6
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 9.2e-120 435.3 699 37.6
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 9.2e-120 435.3 710 37.7
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 2.0e-119 434.1 768 35.9
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 3.5e-119 433.3 652 37.4
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 7.7e-119 432.2 720 36.0
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 4.3e-117 426.4 698 36.5
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 1.2e-116 424.9 715 36.2
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 4.7e-116 422.9 729 35.9
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 1.8e-115 421.0 600 40.0
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 1.2e-114 418.3 610 39.8
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 5.7e-114 416.0 718 36.5
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 4.1e-112 409.8 747 34.4
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 2.0e-111 407.5 688 35.0
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 1.2e-108 398.3 724 34.3
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 4.7e-108 396.4 506 42.1
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 4.0e-107 393.3 682 36.4
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 9.2e-104 382.1 504 42.3
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 4.7e-100 369.8 806 32.0
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 3.4e-98 363.6 581 37.5
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 8.1e-92 342.4 722 32.3
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 3.0e-86 323.9 510 37.3
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 1.1e-85 322.0 494 37.9
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 8.1e-84 315.8 459 41.2
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 6.0e-79 299.7 682 29.8
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 4.0e-75 287.0 709 29.8
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.0e-70 272.3 302 47.0
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 2.0e-66 258.1 336 42.0
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 5.8e-58 229.9 326 39.3
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 5.5e-48 196.8 396 32.6
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 7.7e-42 176.4 247 37.7
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 2.6e-34 151.4 116 59.5
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 1.7e-28 132.1 102 59.8
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 2.2e-28 131.7 160 43.1
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 1.6e-23 115.5 111 51.4
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.3e-14 85.1 166 30.1
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.7e-12 79.0 76 46.1
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 1.0e-09 69.7 99 37.4
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.6e-07 62.4 109 35.8
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 1.8e-06 58.9 67 44.8
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 5.2e-06 57.4 110 25.5


User provided reference genes

Program Settings