Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26747 Corylus avellana HOM05D004007 ORTHO05D005127 1.5e-113 412.9 211 100.0
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 1.3e-61 240.4 189 63.0
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 1.7e-61 240.0 188 63.3
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 3.8e-61 238.8 191 61.3
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 3.8e-61 238.8 189 63.0
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 4.9e-61 238.4 189 61.9
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 4.9e-61 238.4 189 61.9
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 6.4e-61 238.0 189 61.9
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 6.4e-61 238.0 189 63.5
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 6.4e-61 238.0 189 61.9
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 6.4e-61 238.0 189 61.9
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 6.4e-61 238.0 191 61.8
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 6.4e-61 238.0 188 63.3
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 8.4e-61 237.7 189 62.4
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 8.4e-61 237.7 189 61.4
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 8.4e-61 237.7 189 61.4
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 8.4e-61 237.7 189 61.4
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 8.4e-61 237.7 188 63.3
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 62.4
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.4
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.4
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.4
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.4
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.4
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.4
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.4
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.9
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.9
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 1.1e-60 237.3 189 61.9
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 1.4e-60 236.9 189 61.4
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 1.4e-60 236.9 191 61.3
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 1.4e-60 236.9 189 61.4
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 1.4e-60 236.9 189 61.9
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 1.9e-60 236.5 189 60.8
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 1.9e-60 236.5 189 61.4
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 60.8
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 61.4
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 60.8
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 60.8
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 60.8
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 60.8
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 60.8
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 63.0
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 2.4e-60 236.1 189 63.0
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 2.4e-60 236.1 191 61.3
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 2.4e-60 236.1 191 60.7
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 2.4e-60 236.1 191 60.7
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 3.2e-60 235.7 189 60.8
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 3.2e-60 235.7 188 62.2
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 3.2e-60 235.7 189 62.4
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 3.2e-60 235.7 189 61.4
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 3.2e-60 235.7 189 60.3
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 3.2e-60 235.7 191 60.7
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 3.2e-60 235.7 191 60.7
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 4.2e-60 235.3 191 60.7
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 4.2e-60 235.3 189 61.4
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 4.2e-60 235.3 191 61.3
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 5.4e-60 235.0 189 62.4
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 5.4e-60 235.0 191 60.7
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 7.1e-60 234.6 189 61.4
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 7.1e-60 234.6 189 61.9
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 7.1e-60 234.6 191 60.7
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 7.1e-60 234.6 189 61.4
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 7.1e-60 234.6 188 60.6
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 7.1e-60 234.6 189 60.8
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 7.1e-60 234.6 189 61.4
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 9.3e-60 234.2 187 61.5
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 9.3e-60 234.2 191 61.3
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 9.3e-60 234.2 189 61.4
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 9.3e-60 234.2 189 60.8
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 9.3e-60 234.2 191 60.7
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 1.2e-59 233.8 191 60.7
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 1.2e-59 233.8 189 61.4
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 1.2e-59 233.8 189 60.8
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 1.2e-59 233.8 189 60.3
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.2e-59 233.8 189 60.8
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 1.6e-59 233.4 188 62.2
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 1.6e-59 233.4 188 61.7
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 1.6e-59 233.4 188 61.2
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 1.6e-59 233.4 189 60.8
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 1.6e-59 233.4 189 60.8
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 1.6e-59 233.4 189 60.3
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 1.6e-59 233.4 189 60.3
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 1.6e-59 233.4 191 60.2
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 2.1e-59 233.0 189 59.8
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 2.1e-59 233.0 189 60.8
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 2.1e-59 233.0 188 61.7
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 2.7e-59 232.6 189 60.8
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 2.7e-59 232.6 191 60.7
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 2.7e-59 232.6 189 60.8
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 2.7e-59 232.6 191 60.7
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 3.5e-59 232.3 189 60.3
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 3.5e-59 232.3 189 59.8
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 3.5e-59 232.3 191 60.2
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 3.5e-59 232.3 189 60.3
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 3.5e-59 232.3 189 60.8
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 3.5e-59 232.3 189 60.8
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 4.6e-59 231.9 191 59.7
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 4.6e-59 231.9 189 60.3
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 4.6e-59 231.9 189 61.9
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 4.6e-59 231.9 188 60.6
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 4.6e-59 231.9 189 60.8
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 4.6e-59 231.9 187 61.0
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 4.6e-59 231.9 189 61.4
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 4.6e-59 231.9 189 59.8
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 6.0e-59 231.5 188 60.6
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 6.0e-59 231.5 189 60.8
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 6.0e-59 231.5 188 61.2
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 6.0e-59 231.5 189 60.3
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 59.8
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 59.8
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 59.8
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 60.3
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 59.3
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 60.8
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 59.8
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 7.9e-59 231.1 189 60.3
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 1.0e-58 230.7 189 60.3
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 1.0e-58 230.7 189 59.8
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 1.0e-58 230.7 189 59.8
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 1.0e-58 230.7 189 60.3
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 1.0e-58 230.7 189 59.8
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 1.3e-58 230.3 192 58.3
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 1.3e-58 230.3 189 60.8
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 1.3e-58 230.3 189 59.3
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.8e-58 229.9 189 59.3
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 1.8e-58 229.9 191 60.2
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 3.0e-58 229.2 189 60.3
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 3.0e-58 229.2 189 59.8
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 3.9e-58 228.8 189 59.8
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 5.1e-58 228.4 191 59.2
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 5.1e-58 228.4 191 58.6
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 1.5e-57 226.9 188 60.1
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 1.9e-57 226.5 188 58.0
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 5.6e-57 224.9 197 57.4
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 2.8e-56 222.6 194 56.2
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.4e-55 220.3 189 60.8
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 2.4e-55 219.5 214 54.2
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 4.0e-55 218.8 167 62.3
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 5.3e-55 218.4 188 60.6
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 5.1e-50 201.8 189 55.6
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 2.1e-48 196.4 143 67.8
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 1.1e-47 194.1 148 63.5
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 6.9e-47 191.4 143 64.3
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 2.5e-36 156.4 186 45.7
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 3.7e-32 142.5 189 42.3
Cfa021785 Carpinus fangiana HOM05D001982 ORTHO05D003938 2.4e-31 139.8 185 41.1
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 4.1e-31 139.0 104 65.4
Actinidia30141 Actinidia chinensis HOM05D004007 ORTHO05D002753 9.4e-28 127.9 103 64.1
TAR365G0472 Trochodendron aralioides HOM05D004007 ORTHO05D022233 3.9e-26 122.5 109 56.0
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 1.3e-21 107.5 86 60.5
Lj2C1146T3 Lonicera japonica HOM05D004007 ORTHO05D022233 1.6e-19 100.5 156 42.3
Lj2C1145T6 Lonicera japonica HOM05D004007 ORTHO05D022233 1.8e-18 97.1 156 41.7
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 3.7e-08 62.8 57 54.4
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 4.1e-07 59.3 59 50.8
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 7.7e-06 55.1 48 52.1


User provided reference genes

Program Settings