Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 0.0e+00 1233.4 617 100.0
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 8.8e-159 564.7 611 48.8
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 1.1e-153 547.7 620 46.9
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 1.1e-153 547.7 610 46.9
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 4.2e-153 545.8 613 47.8
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 5.5e-153 545.4 611 48.1
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 5.5e-153 545.4 620 46.8
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 5.5e-153 545.4 610 46.7
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 6.1e-152 542.0 612 46.7
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 8.0e-152 541.6 611 47.5
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 6.7e-151 538.5 610 47.0
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 1.1e-150 537.7 613 47.5
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 1.5e-150 537.3 611 46.5
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 2.0e-150 537.0 613 46.3
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 2.0e-150 537.0 611 47.6
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 3.3e-150 536.2 611 47.5
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 3.3e-150 536.2 611 47.1
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 4.4e-150 535.8 623 46.5
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 4.4e-150 535.8 594 48.7
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 1.3e-149 534.3 613 46.5
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.7e-149 533.9 611 46.6
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.2e-149 533.5 623 46.4
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.2e-149 533.5 623 46.4
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.8e-149 533.1 623 46.4
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 3.7e-149 532.7 610 47.4
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 3.7e-149 532.7 611 46.0
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 8.2e-149 531.6 610 45.9
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 8.2e-149 531.6 612 46.6
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 1.1e-148 531.2 612 46.4
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.1e-148 531.2 614 46.6
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 1.1e-148 531.2 625 46.4
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.8e-148 530.4 610 46.9
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 2.4e-148 530.0 610 47.2
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 3.1e-148 529.6 613 46.5
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 4.1e-148 529.3 614 46.9
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 5.3e-148 528.9 613 46.3
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 1.2e-147 527.7 612 45.6
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 1.2e-147 527.7 610 47.2
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 1.6e-147 527.3 611 46.3
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.6e-147 527.3 616 45.9
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 7.7e-147 525.0 618 45.1
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 7.7e-147 525.0 618 45.0
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 1.7e-146 523.9 612 45.6
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 2.2e-146 523.5 615 45.7
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.9e-146 523.1 615 46.2
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 2.9e-146 523.1 612 46.6
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 3.8e-146 522.7 618 44.8
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 8.5e-146 521.5 639 44.6
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 8.5e-146 521.5 616 45.3
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 1.1e-145 521.2 615 45.5
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 1.1e-145 521.2 620 44.5
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 1.1e-145 521.2 618 45.0
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 1.9e-145 520.4 610 46.1
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 2.5e-145 520.0 613 45.4
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.5e-145 518.8 604 45.9
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 5.5e-145 518.8 615 45.0
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 5.5e-145 518.8 615 46.0
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 7.2e-145 518.5 613 45.5
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 7.2e-145 518.5 618 44.7
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 1.2e-144 517.7 618 44.8
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 1.6e-144 517.3 610 45.2
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 2.1e-144 516.9 611 46.5
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 2.1e-144 516.9 615 45.5
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 3.6e-144 516.2 618 44.5
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 8.0e-144 515.0 611 45.5
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 1.8e-143 513.8 619 44.6
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.8e-143 513.8 620 44.7
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.8e-143 513.8 621 44.8
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 1.8e-143 513.8 594 46.6
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 1.8e-143 513.8 626 44.6
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 2.3e-143 513.5 615 44.7
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 3.0e-143 513.1 591 46.0
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 3.0e-143 513.1 616 46.3
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 3.0e-143 513.1 616 46.3
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 4.0e-143 512.7 612 44.3
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 5.2e-143 512.3 615 44.9
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 5.2e-143 512.3 611 45.2
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 1.2e-142 511.1 616 46.1
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 1.2e-142 511.1 615 44.4
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.5e-142 510.8 616 46.1
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.0e-142 510.4 619 43.8
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 3.4e-142 509.6 618 44.2
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 5.7e-142 508.8 638 44.4
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 5.7e-142 508.8 615 46.0
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 7.5e-142 508.4 611 45.3
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 1.7e-141 507.3 624 44.7
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 2.8e-141 506.5 613 45.4
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 1.4e-140 504.2 609 45.0
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.4e-140 504.2 594 45.5
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.0e-139 500.4 611 44.7
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 2.7e-139 500.0 621 45.7
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.7e-138 497.3 611 44.7
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 3.8e-138 496.1 613 45.0
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 6.5e-138 495.4 613 46.2
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 3.2e-137 493.0 614 44.5
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 1.6e-136 490.7 607 45.1
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 1.6e-136 490.7 627 42.6
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 1.8e-135 487.3 687 41.0
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 6.8e-135 485.3 644 43.6
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 4.4e-134 482.6 614 43.6
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.4e-132 476.9 601 43.1
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 2.7e-131 473.4 594 42.8
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 3.5e-131 473.0 588 43.9
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 1.7e-130 470.7 531 49.2
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 2.8e-128 463.4 650 40.9
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 2.8e-128 463.4 616 43.3
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 6.1e-128 462.2 530 46.4
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 1.0e-127 461.5 532 45.9
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 1.0e-127 461.5 612 42.2
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 1.4e-127 461.1 745 37.4
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.5e-126 457.6 610 42.0
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 5.7e-126 455.7 616 42.4
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 5.0e-122 442.6 518 46.7
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.0e-122 442.6 529 46.1
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 8.6e-122 441.8 535 43.9
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.7e-117 427.6 528 42.2
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 2.7e-115 420.2 585 40.0
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 3.9e-114 416.4 597 41.0
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 2.8e-112 410.2 618 37.9
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 2.6e-110 403.7 505 45.1
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 1.1e-108 398.3 474 46.4
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 5.1e-106 389.4 446 45.5
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.4e-103 381.3 807 33.3
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 4.3e-97 359.8 438 45.2
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 4.2e-92 343.2 624 35.9
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 4.0e-87 326.6 507 38.3
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 1.1e-79 302.0 383 42.6
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 1.4e-76 291.6 414 39.4
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 6.7e-74 282.7 402 41.0
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 7.6e-70 269.2 744 28.2
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.1e-68 265.4 313 47.9
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.9e-68 264.6 501 34.7
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 5.7e-65 253.1 320 44.1
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.2e-59 235.3 272 48.2
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.9e-57 228.0 289 45.7
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 1.1e-55 222.2 261 46.0
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.4e-55 221.9 616 28.9
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 5.3e-55 219.9 435 34.7
HPP92_013143 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.0e-54 218.0 263 42.6
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 7.2e-52 209.5 318 39.9
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.6e-51 207.2 292 42.5
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 5.1e-50 203.4 202 51.0
Nitab4.5_0000069g0100 Nicotiana tabacum HOM05D003829 ORTHO05D004943 5.0e-45 186.8 262 41.2
Nitab4.5_0023875g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 9.4e-44 182.6 189 51.9
SEGI_31614 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 5.1e-42 176.8 187 49.7
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.9e-37 161.0 173 50.3
Migut.L00154 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.7e-35 154.5 164 50.0
Haze_18553 Corylus avellana HOM05D003829 ORTHO05D004943 8.0e-35 152.9 174 47.1
Haze_25313 Corylus avellana HOM05D003829 ORTHO05D004943 2.3e-34 151.4 166 47.0
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 6.7e-34 149.8 190 45.8
C02p08100 Brassica napus HOM05D003829 ORTHO05D004943 8.8e-34 149.4 206 39.3
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 4.4e-33 147.1 209 40.2
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 8.2e-32 142.9 207 39.1
HPP92_013186 Vanilla planifolia HOM05D003829 ORTHO05D004943 8.2e-32 142.9 184 40.2
SEGI_27435 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.6e-30 138.7 145 44.1
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.8e-26 125.2 120 50.8
BraA03t10079Z Brassica rapa HOM05D000168 ORTHO05D000811 2.0e-25 121.7 121 47.9
A03p07510 Brassica napus HOM05D003829 ORTHO05D004943 2.8e-24 117.9 121 47.1
SEGI_39885 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.7e-24 117.5 120 44.2
C03p08720 Brassica napus HOM05D003829 ORTHO05D004943 7.0e-23 113.2 121 45.5
BolC3t13370H Brassica oleracea HOM05D000168 ORTHO05D000811 1.6e-22 112.1 121 44.6
Oeu029991.1 Olea europaea HOM05D003829 ORTHO05D004943 2.7e-22 111.3 125 43.2
Glyma.05G172902 Glycine max HOM05D003829 ORTHO05D004943 5.0e-21 107.1 155 39.4
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 7.2e-20 103.2 132 45.5
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 2.0e-17 95.1 254 28.7
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 2.7e-14 84.7 121 37.2
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 1.7e-13 82.0 216 31.0
HanXRQChr05g0129701 Helianthus annuus HOM05D003829 ORTHO05D044979 4.3e-12 77.4 86 43.0
TPR.G25992 Trifolium pratense HOM05D003829 ORTHO05D015515 1.2e-11 75.9 83 45.8
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 5.2e-10 70.5 70 48.6
MELO3C000039.2 Cucumis melo HOM05D003829 ORTHO05D004943 2.2e-08 65.1 74 39.2
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 3.7e-08 64.3 175 30.3
HPP92_012679 Vanilla planifolia HOM05D000282 ORTHO05D004791 1.8e-07 62.0 73 45.2
MELO3C029751.2 Cucumis melo HOM05D003829 ORTHO05D044979 5.4e-07 60.5 59 47.5
Glyma.10G113400 Glycine max HOM05D003829 ORTHO05D028379 7.0e-07 60.1 94 38.3
Lsat_1_v5_gn_4_30320 Lactuca sativa HOM05D003829 ORTHO05D015515 4.6e-06 57.4 38 63.2


User provided reference genes

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