Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26591 Corylus avellana HOM05D003169 ORTHO05D003700 0.0e+00 2620.1 1357 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 5.6e-198 696.0 1239 36.8
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 1.6e-197 694.5 1234 36.7
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 2.1e-197 694.1 1239 36.8
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 2.3e-196 690.6 1228 36.4
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 6.8e-196 689.1 1266 36.4
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 1.2e-195 688.3 1228 36.6
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 9.8e-195 685.3 1245 36.1
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.3e-194 684.9 1223 36.8
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 1.7e-194 684.5 1237 35.8
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 1.7e-194 684.5 1234 36.1
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.7e-194 684.5 1252 36.5
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.9e-194 683.7 1245 36.9
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 3.7e-194 683.3 1238 36.3
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 3.7e-194 683.3 1246 36.6
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 4.9e-194 682.9 1239 36.2
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 6.4e-194 682.6 1223 36.8
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.4e-193 681.4 1252 36.5
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.8e-193 681.0 1223 36.7
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.8e-193 681.0 1225 35.9
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.4e-193 680.6 1243 36.0
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 4.1e-193 679.9 1240 36.0
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 7.0e-193 679.1 1227 36.3
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 1.2e-192 678.3 1246 35.7
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 1.2e-192 678.3 1223 36.8
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.6e-192 677.9 1234 36.2
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 2.7e-192 677.2 1239 36.6
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 2.7e-192 677.2 1314 35.5
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 2.7e-192 677.2 1239 36.2
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 3.5e-192 676.8 1248 35.7
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 4.6e-192 676.4 1231 36.1
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 4.6e-192 676.4 1229 36.2
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 5.9e-192 676.0 1259 36.0
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 5.9e-192 676.0 1252 36.4
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 1.0e-191 675.2 1226 36.1
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.7e-191 674.5 1242 35.4
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 2.3e-191 674.1 1230 35.4
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 2.3e-191 674.1 1221 37.2
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 2.3e-191 674.1 1227 36.5
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 3.9e-191 673.3 1221 35.5
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 5.0e-191 672.9 1246 35.7
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 1.1e-190 671.8 1217 36.5
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 1.1e-190 671.8 1240 36.2
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 1.9e-190 671.0 1232 36.1
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 2.5e-190 670.6 1245 35.5
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 3.3e-190 670.2 1239 36.0
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 4.3e-190 669.8 1243 36.3
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 4.3e-190 669.8 1229 35.8
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 1.2e-189 668.3 1233 36.0
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 1.2e-189 668.3 1241 35.9
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 1.6e-189 667.9 1232 36.2
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 2.8e-189 667.2 1227 36.2
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.8e-189 667.2 1274 35.5
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 3.6e-189 666.8 1266 35.2
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 3.6e-189 666.8 1166 36.7
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 3.6e-189 666.8 1247 35.5
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 4.7e-189 666.4 1243 36.4
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 4.7e-189 666.4 1243 34.8
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 6.2e-189 666.0 1223 36.1
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 6.2e-189 666.0 1243 35.2
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 1.0e-188 665.2 1255 35.5
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 1.0e-188 665.2 1249 35.7
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 1.4e-188 664.8 1221 36.3
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 2.3e-188 664.1 1232 35.5
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 3.1e-188 663.7 1255 35.5
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 3.1e-188 663.7 1236 35.5
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 4.0e-188 663.3 1250 35.6
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 5.2e-188 662.9 1251 35.5
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 1.2e-187 661.8 1205 36.8
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 1.5e-187 661.4 1254 35.5
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 2.0e-187 661.0 1237 37.1
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 2.6e-187 660.6 1262 34.8
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 2.6e-187 660.6 1238 36.5
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 2.6e-187 660.6 1236 34.9
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 5.8e-187 659.4 1262 34.7
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 5.8e-187 659.4 1230 36.0
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 1.7e-186 657.9 1224 35.7
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 1.9e-185 654.4 1273 34.7
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 3.2e-185 653.7 1242 35.3
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 1.2e-184 651.7 1260 36.3
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 1.6e-184 651.4 1285 34.9
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 2.7e-184 650.6 1277 34.5
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 3.5e-184 650.2 1238 35.9
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 4.6e-184 649.8 1266 35.2
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 4.6e-184 649.8 1195 37.4
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 1.0e-183 648.7 1269 35.1
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 1.3e-183 648.3 1249 34.3
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 3.0e-183 647.1 1263 35.5
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 3.9e-183 646.7 1267 34.4
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 8.6e-183 645.6 1197 36.5
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 1.5e-182 644.8 1311 34.2
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 4.3e-182 643.3 1240 35.3
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 7.3e-182 642.5 1239 35.1
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 3.6e-181 640.2 1173 36.3
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 3.1e-180 637.1 1214 35.0
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 2.4e-177 627.5 1224 34.5
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 1.3e-175 621.7 1050 38.8
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 5.6e-174 616.3 1165 34.9
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 6.2e-173 612.8 1241 32.8
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 8.1e-173 612.5 1341 33.4
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 8.6e-167 592.4 1165 36.2
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 8.9e-164 582.4 910 40.7
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 2.4e-161 574.3 1208 33.4
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 2.0e-155 554.7 1128 34.7
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 3.2e-153 547.4 1051 36.3
Ca_03187_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 1.3e-151 542.0 877 40.1
Ciclev10004277m.g Citrus clementina HOM05D003169 ORTHO05D003700 1.8e-151 541.6 852 38.0
Oeu005060.1 Olea europaea HOM05D003169 ORTHO05D003700 1.5e-150 538.5 861 38.7
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 3.1e-148 530.8 1100 33.7
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 2.2e-146 524.6 1244 32.2
Oeu029454.1 Olea europaea HOM05D003169 ORTHO05D003700 2.2e-146 524.6 856 38.6
MCO01G648 Micromonas commoda HOM05D003169 ORTHO05D003700 5.1e-143 513.5 1187 33.4
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 1.4e-140 505.4 1001 36.4
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 5.3e-140 503.4 1145 31.5
MCO16G570 Micromonas commoda HOM05D003169 ORTHO05D003700 2.6e-139 501.1 1180 32.0
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 1.7e-138 498.4 1067 32.6
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 3.5e-136 490.7 1039 35.4
Solyc10g005490.4 Solanum lycopersicum HOM05D003169 ORTHO05D003700 1.6e-125 455.3 458 49.1
VMungo1127G0472 Vigna mungo HOM05D003169 ORTHO05D003700 1.7e-122 445.3 449 48.8
PRCOL_00005992 Prasinoderma coloniale HOM05D003169 ORTHO05D003700 4.8e-117 427.2 1382 29.6
Cre13.g578501 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 6.5e-114 416.8 1348 29.2
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 6.7e-111 406.8 973 30.4
Cc00_g09110 Coffea canephora HOM05D003169 ORTHO05D003700 6.7e-111 406.8 420 48.6
Cre07.g350100 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 2.9e-106 391.3 1221 29.0
Ca_30144_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 2.9e-106 391.3 737 37.7
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 2.1e-104 385.2 934 30.4
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 5.3e-100 370.5 952 29.9
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.3e-95 355.1 947 29.3
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 5.4e-92 344.0 864 29.6
MBI18_g40795_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 1.2e-78 299.7 710 32.7
Cre02.g095045 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 2.6e-78 298.5 596 34.2
Medtr6g091930 Medicago truncatula HOM05D003169 ORTHO05D003700 3.4e-78 298.1 299 52.2
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 1.3e-77 296.2 555 35.7
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 2.0e-75 288.9 557 35.2
Cre01.g053250 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 4.6e-75 287.7 525 35.4
Lj2A8G63 Lonicera japonica HOM05D003169 ORTHO05D003700 1.0e-74 286.6 297 50.8
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 2.8e-72 278.5 506 35.4
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 2.0e-67 262.3 372 43.0
COL.COLO4_25000 Corchorus olitorius HOM05D003169 ORTHO05D003700 4.3e-65 254.6 316 40.2
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 4.3e-65 254.6 353 44.8
Os08g0223833 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 7.3e-65 253.8 280 52.5
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 4.4e-62 244.6 457 35.7
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 4.6e-59 234.6 434 35.7
Oeu005061.1 Olea europaea HOM05D003169 ORTHO05D003700 1.9e-57 229.2 248 49.2
MBI18_g42879_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 4.3e-57 228.0 271 46.5
HanXRQChr13g0408921 Helianthus annuus HOM05D003169 ORTHO05D003700 3.1e-55 221.9 248 47.2
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 1.1e-52 213.4 264 47.7
Os08g0223766 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 1.9e-52 212.6 275 38.9
TPR.G14822 Trifolium pratense HOM05D003169 ORTHO05D003700 4.1e-52 211.5 319 41.1
SEGI_39235 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 3.2e-44 185.3 164 52.4
TPR.G3623 Trifolium pratense HOM05D003169 ORTHO05D003700 9.9e-38 163.7 187 41.7
CiPaw.15G112000 Carya illinoinensis HOM05D003169 ORTHO05D003700 1.9e-36 159.5 145 54.5
Os08g0223700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 3.5e-35 155.2 123 60.2
Oeu025996.1 Olea europaea HOM05D003169 ORTHO05D003700 7.9e-35 154.1 144 51.4
Oeu029455.1 Olea europaea HOM05D003169 ORTHO05D003700 4.3e-33 148.3 393 29.3
SEGI_10615 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 7.4e-33 147.5 113 62.8
TPR.G3613 Trifolium pratense HOM05D003169 ORTHO05D003700 1.9e-28 132.9 130 53.8
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 2.4e-28 132.5 376 28.2
Cpa.g.sc32.149 Carica papaya HOM05D003169 ORTHO05D003700 9.3e-28 130.6 178 33.1
Cpa.g.sc32.155 Carica papaya HOM05D003169 ORTHO05D003700 2.1e-27 129.4 117 53.8
MD07G1097900 Malus domestica HOM05D003169 ORTHO05D003700 1.5e-25 123.2 144 48.6
Nitab4.5_0003291g0050 Nicotiana tabacum HOM05D003169 ORTHO05D003700 4.3e-25 121.7 130 50.8
Nitab4.5_0007774g0010 Nicotiana tabacum HOM05D003169 ORTHO05D003700 5.6e-25 121.3 142 48.6
TPR.G373 Trifolium pratense HOM05D003169 ORTHO05D003700 5.8e-22 111.3 114 50.9
Nn7g38412 Nelumbo nucifera HOM05D003169 ORTHO05D003700 5.5e-20 104.8 119 37.0
Actinidia33340 Actinidia chinensis HOM05D003169 ORTHO05D003700 3.5e-19 102.1 61 78.7
SGA_v2.0_scaffold4G01863 Striga asiatica HOM05D003169 ORTHO05D003700 1.0e-18 100.5 115 47.0
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 1.8e-18 99.8 123 38.2
Thhalv10000653m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.3e-16 93.6 96 44.8
Nitab4.5_0003291g0040 Nicotiana tabacum HOM05D003169 ORTHO05D003700 6.9e-15 87.8 307 27.4
Peaxi162Scf00166g00077 Petunia axillaris HOM05D003169 ORTHO05D003700 4.5e-14 85.1 269 26.8
Aqoxy1G03228 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 5.0e-13 81.6 162 37.0
BcaB02g08681 Brassica carinata HOM05D003169 ORTHO05D003700 5.0e-13 81.6 204 31.9
arahy.Tifrunner.gnm1.ann1.2P0S20 Arachis hypogaea HOM05D003169 ORTHO05D003700 7.9e-11 74.3 85 49.4
Rhsim06G0106300 Rhododendron simsii HOM05D003169 ORTHO05D003700 2.3e-10 72.8 260 23.8
Thhalv10000387m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 3.9e-10 72.0 90 44.4
SEGI_14617 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 1.1e-09 70.5 105 44.8
SEGI_09386 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 6.3e-08 64.7 124 30.6
TPR.G20402 Trifolium pratense HOM05D003169 ORTHO05D003700 1.2e-06 60.5 61 55.7
Cre02.g095052 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 7.7e-06 57.8 59 52.5


User provided reference genes

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