Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 2.6e-158 562.0 279 100.0
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 6.7e-58 228.4 258 47.3
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 5.7e-57 225.3 258 47.3
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 9.7e-57 224.6 242 48.3
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 1.3e-56 224.2 245 48.6
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 2.8e-56 223.0 256 45.7
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 3.7e-56 222.6 255 46.3
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 4.8e-56 222.2 251 47.0
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 4.8e-56 222.2 239 46.0
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 4.8e-56 222.2 248 46.0
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 8.2e-56 221.5 244 46.7
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 8.2e-56 221.5 251 44.6
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 1.1e-55 221.1 242 45.0
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 1.1e-55 221.1 246 47.2
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.1e-55 221.1 248 46.0
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.1e-55 221.1 259 44.8
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 1.4e-55 220.7 263 46.0
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 1.8e-55 220.3 236 47.0
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 2.4e-55 219.9 223 49.3
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 2.4e-55 219.9 244 46.3
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 3.1e-55 219.5 245 46.5
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 3.1e-55 219.5 241 46.9
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 3.1e-55 219.5 242 47.1
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 4.1e-55 219.2 248 46.0
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 5.3e-55 218.8 217 49.3
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 5.3e-55 218.8 238 45.8
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 5.3e-55 218.8 248 45.2
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 7.0e-55 218.4 259 44.0
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 7.0e-55 218.4 248 45.6
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 9.1e-55 218.0 244 46.7
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 9.1e-55 218.0 258 45.3
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 1.2e-54 217.6 244 45.9
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 1.6e-54 217.2 219 49.8
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.6e-54 217.2 246 46.3
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 2.0e-54 216.9 243 47.3
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 2.0e-54 216.9 245 46.1
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 2.0e-54 216.9 261 45.6
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 2.0e-54 216.9 219 50.2
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.7e-54 216.5 219 50.7
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.7e-54 216.5 219 51.1
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 2.7e-54 216.5 242 45.0
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 3.5e-54 216.1 245 46.5
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 3.5e-54 216.1 219 50.2
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 3.5e-54 216.1 245 45.3
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 3.5e-54 216.1 231 48.9
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 3.5e-54 216.1 243 45.7
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 4.5e-54 215.7 248 46.8
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.9e-54 215.3 223 49.3
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 5.9e-54 215.3 244 45.9
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 5.9e-54 215.3 258 46.1
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 5.9e-54 215.3 245 44.9
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 5.9e-54 215.3 217 50.2
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 7.7e-54 214.9 243 46.5
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 7.7e-54 214.9 239 44.4
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 7.7e-54 214.9 249 46.6
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 1.0e-53 214.5 262 44.3
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 1.0e-53 214.5 246 47.2
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 1.0e-53 214.5 232 47.0
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 1.0e-53 214.5 219 50.2
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.0e-53 214.5 259 44.8
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.3e-53 214.2 217 49.3
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 1.3e-53 214.2 245 46.5
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 1.3e-53 214.2 259 43.6
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.7e-53 213.8 245 45.7
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 1.7e-53 213.8 246 45.5
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 1.7e-53 213.8 246 45.9
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 2.2e-53 213.4 246 46.3
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 2.2e-53 213.4 246 46.3
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 2.2e-53 213.4 246 46.3
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 2.2e-53 213.4 246 46.7
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 2.2e-53 213.4 248 45.2
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 2.9e-53 213.0 219 48.4
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 3.8e-53 212.6 246 45.1
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 3.8e-53 212.6 219 48.9
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 3.8e-53 212.6 238 45.4
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 5.0e-53 212.2 243 46.1
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 5.0e-53 212.2 240 45.8
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 6.5e-53 211.8 244 45.1
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 6.5e-53 211.8 245 45.7
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.1e-52 211.1 241 44.8
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 1.5e-52 210.7 218 48.6
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 1.5e-52 210.7 219 47.5
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 1.9e-52 210.3 217 48.4
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 4.2e-52 209.1 245 45.7
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 5.5e-52 208.8 241 46.9
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 5.5e-52 208.8 258 45.0
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 5.5e-52 208.8 238 46.2
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 1.6e-51 207.2 244 44.7
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 1.8e-50 203.8 216 47.7
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 1.8e-50 203.8 265 43.0
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 2.3e-50 203.4 250 43.2
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 3.4e-49 199.5 281 39.9
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 2.2e-48 196.8 226 45.1
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 8.3e-48 194.9 226 46.5
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 1.8e-47 193.7 219 45.2
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.2e-46 191.0 254 41.3
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 5.0e-45 185.7 243 42.4
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 8.0e-43 178.3 256 39.1
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 1.8e-42 177.2 223 42.6
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 3.0e-42 176.4 235 42.6
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 9.8e-41 171.4 229 42.4
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.8e-39 167.2 182 47.3
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 1.0e-37 161.4 202 42.6
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 2.1e-35 153.7 237 40.9
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.2e-33 147.9 189 41.8
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 2.0e-33 147.1 202 41.1
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 2.4e-31 140.2 167 46.1
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.6e-30 137.5 151 47.0
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.1e-26 124.8 356 30.6
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 3.4e-25 119.8 114 53.5
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 3.5e-22 109.8 132 42.4
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 2.7e-14 83.6 81 54.3
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.1e-13 79.3 191 30.9
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 6.6e-13 79.0 147 36.1
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 4.0e-10 69.7 59 55.9
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 3.4e-09 66.6 109 38.5
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 7.6e-09 65.5 52 59.6
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 2.2e-08 63.9 180 26.7
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 4.1e-07 59.7 65 40.0
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 7.8e-06 55.5 107 36.4


User provided reference genes

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