Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23453 Corylus avellana HOM05D000234 ORTHO05D165716 4.1e-62 241.1 115 100.0
CiPaw.14G105300 Carya illinoinensis HOM05D000234 ORTHO05D000335 2.9e-15 85.5 166 36.1
Haze_18728 Corylus avellana HOM05D000234 ORTHO05D000335 1.1e-14 83.6 166 34.3
Haze_23501 Corylus avellana HOM05D000234 ORTHO05D000335 5.5e-14 81.3 166 36.1
QL01p014230 Quercus lobata HOM05D000234 ORTHO05D000335 1.6e-13 79.7 165 37.6
Haze_18738 Corylus avellana HOM05D000234 ORTHO05D000335 2.7e-13 79.0 166 32.5
QL01p014277 Quercus lobata HOM05D000234 ORTHO05D000335 6.1e-13 77.8 165 36.4
Lj2C1001G4 Lonicera japonica HOM05D000234 ORTHO05D000335 5.1e-12 74.7 115 40.9
QL01p014201 Quercus lobata HOM05D000234 ORTHO05D000335 5.1e-12 74.7 165 36.4
Cfa010114 Carpinus fangiana HOM05D000234 ORTHO05D000335 1.5e-11 73.2 163 35.6
Potri.001G213700 Populus trichocarpa HOM05D000234 ORTHO05D000335 3.7e-10 68.6 165 32.7
TWI75G1151 Tripterygium wilfordii HOM05D000234 ORTHO05D000335 6.3e-10 67.8 160 31.9
Thecc.01G094000 Theobroma cacao HOM05D000234 ORTHO05D000335 4.1e-09 65.1 126 37.3
PSO339G5633 Papaver somniferum HOM05D000234 ORTHO05D000335 5.3e-09 64.7 67 50.7
PSO384G4486 Papaver somniferum HOM05D000234 ORTHO05D000335 5.3e-09 64.7 67 50.7
GSVIVG01031430001 Vitis vinifera HOM05D000234 ORTHO05D000335 5.3e-09 64.7 66 48.5
CSS0021146 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 6.9e-09 64.3 162 30.9
Lalb_Chr03g0027831 Lupinus albus HOM05D000234 ORTHO05D000335 6.9e-09 64.3 164 32.3
Lalb_Chr19g0136821 Lupinus albus HOM05D000234 ORTHO05D000335 6.9e-09 64.3 165 31.5
Hma1.2p1_0981F.1_g243680 Hydrangea macrophylla HOM05D000234 ORTHO05D000335 9.1e-09 63.9 162 30.9
Oeu039142.1 Olea europaea HOM05D000234 ORTHO05D000335 9.1e-09 63.9 165 27.9
Sabra04G0149000 Salix brachista HOM05D000234 ORTHO05D000335 9.1e-09 63.9 165 30.9
CSS0036081 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 1.2e-08 63.5 161 31.1
Duzib168G1838 Durio zibethinus HOM05D000234 ORTHO05D000335 1.2e-08 63.5 126 37.3
MD03G1130600 Malus domestica HOM05D000234 ORTHO05D000335 1.5e-08 63.2 66 53.0
TAR636G1923 Trochodendron aralioides HOM05D000234 ORTHO05D000335 1.5e-08 63.2 66 47.0
Ciclev10027752m.g Citrus clementina HOM05D000234 ORTHO05D000335 2.0e-08 62.8 165 30.9
Manes.04G011400 Manihot esculenta HOM05D000234 ORTHO05D000335 2.0e-08 62.8 67 50.7
Oeu008371.1 Olea europaea HOM05D000234 ORTHO05D000335 2.0e-08 62.8 67 49.3
Potri.009G001500 Populus trichocarpa HOM05D000234 ORTHO05D000335 2.0e-08 62.8 67 49.3
TAR636G2444 Trochodendron aralioides HOM05D000234 ORTHO05D000335 2.0e-08 62.8 66 45.5
RcHm_v2.0_Chr5g0056091 Rosa chinensis HOM05D000234 ORTHO05D000335 2.6e-08 62.4 66 50.0
AT2G27880 Arabidopsis thaliana HOM05D000234 ORTHO05D000335 4.5e-08 61.6 165 33.3
CSS0010812 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 4.5e-08 61.6 64 48.4
Prupe.6G115400 Prunus persica HOM05D000234 ORTHO05D000335 4.5e-08 61.6 161 30.4
CSS0014326 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 5.9e-08 61.2 161 31.1
CSS0033840 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 5.9e-08 61.2 161 30.4
MD11G1152200 Malus domestica HOM05D000234 ORTHO05D000335 7.7e-08 60.8 66 50.0
PSO339G6171 Papaver somniferum HOM05D000234 ORTHO05D000335 7.7e-08 60.8 66 47.0
Ciclev10027760m.g Citrus clementina HOM05D000234 ORTHO05D000335 1.3e-07 60.1 165 29.7
Lsat_1_v5_gn_1_61441 Lactuca sativa HOM05D000234 ORTHO05D000335 1.3e-07 60.1 67 46.3
CSS0022825 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 1.7e-07 59.7 164 26.8
Thecc.01G094200 Theobroma cacao HOM05D000234 ORTHO05D000335 1.7e-07 59.7 124 36.3
ClCG01G014010 Citrullus lanatus HOM05D000234 ORTHO05D000335 2.2e-07 59.3 164 31.7
COL.COLO4_19252 Corchorus olitorius HOM05D000234 ORTHO05D000335 2.2e-07 59.3 126 33.3
FvH4_3g30202 Fragaria vesca HOM05D000234 ORTHO05D000335 2.2e-07 59.3 66 47.0
FAN11G3679 Fragaria x ananassa HOM05D000234 ORTHO05D000335 2.2e-07 59.3 66 47.0
FAN16G2944 Fragaria x ananassa HOM05D000234 ORTHO05D000335 2.2e-07 59.3 66 47.0
FAN25G1574 Fragaria x ananassa HOM05D000234 ORTHO05D000335 2.2e-07 59.3 66 47.0
CSS0011348 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 2.9e-07 58.9 55 50.9
Ciclev10027750m.g Citrus clementina HOM05D000234 ORTHO05D000335 2.9e-07 58.9 165 29.1
Sed0001076 Sechium edule HOM05D000234 ORTHO05D000335 2.9e-07 58.9 161 30.4
SGA_v2.0_scaffold27G11585 Striga asiatica HOM05D000234 ORTHO05D000335 2.9e-07 58.9 67 44.8
HanXRQChr11g0345791 Helianthus annuus HOM05D000234 ORTHO05D000335 3.8e-07 58.5 67 44.8
Oeu026990.1 Olea europaea HOM05D000234 ORTHO05D000335 3.8e-07 58.5 67 41.8
Atru.chr2.696 Acer truncatum HOM05D000234 ORTHO05D000335 5.0e-07 58.2 62 50.0
CiPaw.13G143000 Carya illinoinensis HOM05D000234 ORTHO05D000335 5.0e-07 58.2 162 31.5
Ciclev10027763m.g Citrus clementina HOM05D000234 ORTHO05D000335 5.0e-07 58.2 162 29.6
Lj1C217T2 Lonicera japonica HOM05D000234 ORTHO05D000335 5.0e-07 58.2 66 45.5
Dinv29398 Davidia involucrata HOM05D000234 ORTHO05D000335 6.5e-07 57.8 160 30.6
Gorai.006G103100 Gossypium raimondii HOM05D000234 ORTHO05D000335 6.5e-07 57.8 118 33.9
Manes.11G154900 Manihot esculenta HOM05D000234 ORTHO05D000335 6.5e-07 57.8 62 48.4
Phvul.011G088200 Phaseolus vulgaris HOM05D000234 ORTHO05D000335 6.5e-07 57.8 67 49.3
Thecc.09G294900 Theobroma cacao HOM05D000234 ORTHO05D000335 6.5e-07 57.8 126 35.7
CiPaw.13G142700 Carya illinoinensis HOM05D000234 ORTHO05D000335 1.1e-06 57.0 162 30.9
Lj3g0004248 Lotus japonicus HOM05D000234 ORTHO05D000335 1.1e-06 57.0 67 44.8
Sc12g0003830 Simmondsia chinensis HOM05D000234 ORTHO05D000335 1.1e-06 57.0 55 52.7
Oeu040150.1 Olea europaea HOM05D000234 ORTHO05D000335 1.4e-06 56.6 156 26.9
PGR102G3042 Punica granatum HOM05D000234 ORTHO05D000335 1.4e-06 56.6 70 47.1
VMungo1127G1983 Vigna mungo HOM05D000234 ORTHO05D000335 1.4e-06 56.6 65 47.7
Actinidia07198 Actinidia chinensis HOM05D000234 ORTHO05D000335 1.9e-06 56.2 162 30.9
Actinidia24164 Actinidia chinensis HOM05D000234 ORTHO05D000335 1.9e-06 56.2 162 30.2
AL4G22360 Arabidopsis lyrata HOM05D000234 ORTHO05D000335 1.9e-06 56.2 129 32.6
Cpa.g.sc47.31 Carica papaya HOM05D000234 ORTHO05D000335 1.9e-06 56.2 161 29.2
Thhalv10016181m.g Eutrema salsugineum HOM05D000234 ORTHO05D000335 1.9e-06 56.2 129 33.3
FAN25G2668 Fragaria x ananassa HOM05D000234 ORTHO05D000335 1.9e-06 56.2 120 36.7
Lj2A999G36 Lonicera japonica HOM05D000234 ORTHO05D000335 1.9e-06 56.2 66 45.5
Atru.chr8.1479 Acer truncatum HOM05D000234 ORTHO05D000335 2.5e-06 55.8 158 30.4
CARHR120570 Cardamine hirsuta HOM05D000234 ORTHO05D000335 2.5e-06 55.8 65 52.3
Carub.0004s0863 Capsella rubella HOM05D000234 ORTHO05D000335 3.2e-06 55.5 65 49.2
Psat3g037280 Pisum sativum HOM05D000234 ORTHO05D000335 3.2e-06 55.5 162 29.6
EL10Ac9g21040 Beta vulgaris HOM05D000234 ORTHO05D000335 4.2e-06 55.1 54 51.9
Gorai.006G103000 Gossypium raimondii HOM05D000234 ORTHO05D000335 4.2e-06 55.1 31 77.4
SalBow6G5706 Salvia bowleyana HOM05D000234 ORTHO05D000335 4.2e-06 55.1 67 43.3
BcaB02g10122 Brassica carinata HOM05D000234 ORTHO05D000335 5.5e-06 54.7 126 32.5
Ciclev10027755m.g Citrus clementina HOM05D000234 ORTHO05D000335 5.5e-06 54.7 165 28.5
CsaV3_4G022010 Cucumis sativus L. HOM05D000234 ORTHO05D000335 5.5e-06 54.7 67 46.3
Gohir.A09G086900 Gossypium hirsutum HOM05D000234 ORTHO05D000335 5.5e-06 54.7 31 77.4
Gohir.D09G086500 Gossypium hirsutum HOM05D000234 ORTHO05D000335 5.5e-06 54.7 31 77.4
Sp4g10713 Schrenkiella parvula HOM05D000234 ORTHO05D000335 5.5e-06 54.7 129 31.8
vmacro03236 Vaccinium macrocarpon HOM05D000234 ORTHO05D000335 5.5e-06 54.7 67 44.8
Zm00001eb212800 Zea mays HOM05D000234 ORTHO05D000335 5.5e-06 54.7 67 43.3
Nn6g35123 Nelumbo nucifera HOM05D000234 ORTHO05D000335 7.2e-06 54.3 126 29.4
Aqoxy5G02218 Aquilegia oxysepala HOM05D000234 ORTHO05D000335 9.4e-06 53.9 31 74.2
BcaC02g09335 Brassica carinata HOM05D000234 ORTHO05D000335 9.4e-06 53.9 161 31.1
BcaC02g10913 Brassica carinata HOM05D000234 ORTHO05D000335 9.4e-06 53.9 161 31.1
A07p18430 Brassica napus HOM05D000234 ORTHO05D000335 9.4e-06 53.9 161 31.1
C04p23730 Brassica napus HOM05D000234 ORTHO05D000335 9.4e-06 53.9 161 31.1
BolC4t23872H Brassica oleracea HOM05D000234 ORTHO05D000335 9.4e-06 53.9 161 31.1
BraA07t29559Z Brassica rapa HOM05D000234 ORTHO05D000335 9.4e-06 53.9 161 31.1
CANSAT64G0728 Cannabis sativa HOM05D000234 ORTHO05D000335 9.4e-06 53.9 67 44.8
AUR62031777 Chenopodium quinoa HOM05D000234 ORTHO05D000335 9.4e-06 53.9 31 71.0
MELO3C004836.2 Cucumis melo HOM05D000234 ORTHO05D000335 9.4e-06 53.9 67 46.3
CsaV3_1G014330 Cucumis sativus L. HOM05D000234 ORTHO05D000335 9.4e-06 53.9 67 46.3
Eucgr.B03907 Eucalyptus grandis HOM05D000234 ORTHO05D000335 9.4e-06 53.9 31 74.2
FAN11G0222 Fragaria x ananassa HOM05D000234 ORTHO05D000335 9.4e-06 53.9 67 46.3
FAN21G0058 Fragaria x ananassa HOM05D000234 ORTHO05D000335 9.4e-06 53.9 67 46.3


User provided reference genes

Program Settings