Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17068 Corylus avellana HOM05D004187 ORTHO05D004890 2.0e-112 409.1 205 100.0
Cfa001472 Carpinus fangiana HOM05D004187 ORTHO05D004890 2.6e-91 339.0 206 85.0
QL08p059729 Quercus lobata HOM05D004187 ORTHO05D004890 6.9e-60 234.6 214 60.3
RcHm_v2.0_Chr1g0367131 Rosa chinensis HOM05D004187 ORTHO05D004890 1.7e-45 186.8 206 52.4
Prupe.2G235500 Prunus persica HOM05D004187 ORTHO05D004890 1.1e-44 184.1 204 48.5
Dinv03045 Davidia involucrata HOM05D004187 ORTHO05D004890 4.5e-43 178.7 193 50.8
Cfa008463 Carpinus fangiana HOM05D004187 ORTHO05D004890 2.6e-35 152.9 127 58.3
Dinv25939 Davidia involucrata HOM05D004187 ORTHO05D004890 4.5e-35 152.1 127 54.3
Potri.008G076500 Populus trichocarpa HOM05D004187 ORTHO05D004890 4.5e-35 152.1 214 41.6
Aqoxy2G03437 Aquilegia oxysepala HOM05D004187 ORTHO05D004890 5.9e-35 151.8 127 56.7
Rhsim04G0199500 Rhododendron simsii HOM05D004187 ORTHO05D004890 7.7e-35 151.4 172 45.3
Haze_11210 Corylus avellana HOM05D004187 ORTHO05D004890 1.0e-34 151.0 127 57.5
CANSAT78G1519 Cannabis sativa HOM05D004187 ORTHO05D004890 1.3e-34 150.6 127 57.5
Glyma.01G235900 Glycine max HOM05D004187 ORTHO05D004890 2.9e-34 149.4 161 45.3
Rhsim02G0027200 Rhododendron simsii HOM05D004187 ORTHO05D004890 2.9e-34 149.4 137 52.6
QL06p001566 Quercus lobata HOM05D004187 ORTHO05D004890 5.0e-34 148.7 127 53.5
TWI73G1209 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 5.0e-34 148.7 136 50.7
VMungo0251G0090 Vigna mungo HOM05D004187 ORTHO05D004890 5.0e-34 148.7 132 50.8
GSVIVG01018017001 Vitis vinifera HOM05D004187 ORTHO05D004890 6.5e-34 148.3 128 53.9
Actinidia40129 Actinidia chinensis HOM05D004187 ORTHO05D004890 8.5e-34 147.9 153 48.4
Gohir.A10G118400 Gossypium hirsutum HOM05D004187 ORTHO05D004890 8.5e-34 147.9 147 48.3
Gorai.011G165600 Gossypium raimondii HOM05D004187 ORTHO05D004890 8.5e-34 147.9 147 48.3
VMungo1383G1788 Vigna mungo HOM05D004187 ORTHO05D004890 8.5e-34 147.9 205 41.5
Ca_24413_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.5e-33 147.1 132 52.3
Thecc.04G235800 Theobroma cacao HOM05D002650 ORTHO05D002924 1.5e-33 147.1 132 53.0
CiPaw.02G122700 Carya illinoinensis HOM05D004187 ORTHO05D004890 1.9e-33 146.7 127 55.9
Sed0024336 Sechium edule HOM05D004187 ORTHO05D004890 2.5e-33 146.4 128 53.9
CSS0045006 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 3.2e-33 146.0 132 53.0
TAR362G0393 Trochodendron aralioides HOM05D004187 ORTHO05D004890 3.2e-33 146.0 147 50.3
Carub.0003s2284 Capsella rubella HOM05D004187 ORTHO05D004890 4.2e-33 145.6 127 52.0
MELO3C006513.2 Cucumis melo HOM05D004187 ORTHO05D004890 4.2e-33 145.6 128 53.9
CsaV3_3G013040 Cucumis sativus L. HOM05D004187 ORTHO05D004890 4.2e-33 145.6 128 53.9
Gohir.D10G148300 Gossypium hirsutum HOM05D004187 ORTHO05D004890 4.2e-33 145.6 145 49.0
vmacro15360 Vaccinium macrocarpon HOM05D004187 ORTHO05D004890 4.2e-33 145.6 131 52.7
ClCG05G004990 Citrullus lanatus HOM05D004187 ORTHO05D004890 5.5e-33 145.2 128 53.9
Eucgr.H03428 Eucalyptus grandis HOM05D004187 ORTHO05D004890 5.5e-33 145.2 127 54.3
MBI11_g32998_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 7.2e-33 144.8 126 52.4
THA.LOC104803042 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 9.4e-33 144.4 127 53.5
CSS0034976 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 1.2e-32 144.1 148 47.3
Medtr5g006610 Medicago truncatula HOM05D004187 ORTHO05D004890 1.2e-32 144.1 132 50.0
Nn1g02390 Nelumbo nucifera HOM05D004187 ORTHO05D004890 1.2e-32 144.1 127 52.8
AL3G36980 Arabidopsis lyrata HOM05D004187 ORTHO05D004890 2.1e-32 143.3 136 50.7
RcHm_v2.0_Chr4g0407591 Rosa chinensis HOM05D004187 ORTHO05D004890 2.1e-32 143.3 127 52.8
AT3G22680 Arabidopsis thaliana HOM05D004187 ORTHO05D004890 2.7e-32 142.9 127 52.0
Phvul.002G043400 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 2.7e-32 142.9 132 51.5
Medtr5g006600 Medicago truncatula HOM05D004187 ORTHO05D004890 4.7e-32 142.1 132 49.2
TPR.G37866 Trifolium pratense HOM05D004187 ORTHO05D004890 4.7e-32 142.1 132 50.8
LjContig00408g0013113 Lotus japonicus HOM05D004187 ORTHO05D004890 6.1e-32 141.7 138 50.0
Lalb_Chr05g0211101 Lupinus albus HOM05D004187 ORTHO05D004890 6.1e-32 141.7 154 46.8
Duzib212G0360 Durio zibethinus HOM05D004187 ORTHO05D004890 8.0e-32 141.4 147 47.6
CARHR098560 Cardamine hirsuta HOM05D004187 ORTHO05D004890 1.0e-31 141.0 127 48.8
MD16G1197500 Malus domestica HOM05D004187 ORTHO05D004890 1.4e-31 140.6 148 48.0
Psat2g190440 Pisum sativum HOM05D004187 ORTHO05D004890 1.8e-31 140.2 128 51.6
TPR.G37887 Trifolium pratense HOM05D004187 ORTHO05D004890 1.8e-31 140.2 158 45.6
COL.COLO4_21526 Corchorus olitorius HOM05D004187 ORTHO05D004890 2.3e-31 139.8 122 54.1
FAN13G2545 Fragaria x ananassa HOM05D004187 ORTHO05D004890 2.3e-31 139.8 127 52.0
Glyma.11G007300 Glycine max HOM05D004187 ORTHO05D004890 2.3e-31 139.8 120 51.7
Prupe.1G018500 Prunus persica HOM05D004187 ORTHO05D004890 2.3e-31 139.8 201 42.3
Rhsim03G0003800 Rhododendron simsii HOM05D004187 ORTHO05D004890 2.3e-31 139.8 199 44.7
Sc19g0004030 Simmondsia chinensis HOM05D004187 ORTHO05D004890 3.0e-31 139.4 132 48.5
Thhalv10021679m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 4.0e-31 139.0 136 50.0
FvH4_5g32450 Fragaria vesca HOM05D004187 ORTHO05D004890 4.0e-31 139.0 148 46.6
FAN18G3642 Fragaria x ananassa HOM05D004187 ORTHO05D004890 4.0e-31 139.0 148 46.6
TWI53G1349 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 4.0e-31 139.0 138 48.6
Atru.chr1.2916 Acer truncatum HOM05D004187 ORTHO05D004890 5.2e-31 138.7 126 50.0
TAR633G0827 Trochodendron aralioides HOM05D004187 ORTHO05D004890 5.2e-31 138.7 127 53.5
FvH4_4g00760 Fragaria vesca HOM05D004187 ORTHO05D004890 8.8e-31 137.9 164 43.9
FAN12G2319 Fragaria x ananassa HOM05D004187 ORTHO05D004890 8.8e-31 137.9 164 43.9
Manes.15G031200 Manihot esculenta HOM05D004187 ORTHO05D004890 8.8e-31 137.9 127 50.4
Sed0012407 Sechium edule HOM05D004187 ORTHO05D004890 8.8e-31 137.9 128 51.6
AUR62008916 Chenopodium quinoa HOM05D004187 ORTHO05D004890 1.2e-30 137.5 135 49.6
Nitab4.5_0000050g0260 Nicotiana tabacum HOM05D004187 ORTHO05D004890 1.2e-30 137.5 160 44.4
Potri.008G155800 Populus trichocarpa HOM05D004187 ORTHO05D004890 1.2e-30 137.5 128 49.2
FAN22G0369 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.5e-30 137.1 164 44.5
Nitab4.5_0001792g0010 Nicotiana tabacum HOM05D004187 ORTHO05D004890 1.5e-30 137.1 120 52.5
arahy.Tifrunner.gnm1.ann1.Q6C7EF Arachis hypogaea HOM05D004187 ORTHO05D004890 2.6e-30 136.3 150 47.3
ECA247G0434 Erigeron canadensis HOM05D000045 ORTHO05D004890 2.6e-30 136.3 128 53.1
arahy.Tifrunner.gnm1.ann1.8FXP11 Arachis hypogaea HOM05D004187 ORTHO05D004890 3.3e-30 136.0 128 50.8
arahy.Tifrunner.gnm1.ann1.Q4QH0F Arachis hypogaea HOM05D004187 ORTHO05D004890 9.7e-30 134.4 176 44.3
Lj1g0019332 Lotus japonicus HOM05D004187 ORTHO05D004890 9.7e-30 134.4 210 40.5
PGR129G0008 Punica granatum HOM05D004187 ORTHO05D004890 9.7e-30 134.4 145 47.6
PGR142G1722 Punica granatum HOM05D004187 ORTHO05D004890 9.7e-30 134.4 145 47.6
BcaB06g26379 Brassica carinata HOM05D004187 ORTHO05D004890 1.3e-29 134.0 159 44.0
Sabra08G0118600 Salix brachista HOM05D004187 ORTHO05D004890 1.3e-29 134.0 128 48.4
PSO170G4884 Papaver somniferum HOM05D004187 ORTHO05D004890 1.7e-29 133.7 126 50.8
A05p26020 Brassica napus HOM05D004187 ORTHO05D004890 2.8e-29 132.9 161 43.5
Ca_24412_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 2.8e-29 132.9 132 48.5
Ca_30960_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 2.8e-29 132.9 132 48.5
FAN08G0419 Fragaria x ananassa HOM05D004187 ORTHO05D004890 2.8e-29 132.9 127 50.4
Actinidia32414 Actinidia chinensis HOM05D004187 ORTHO05D004890 3.7e-29 132.5 201 39.3
arahy.Tifrunner.gnm1.ann1.LSRC2Y Arachis hypogaea HOM05D004187 ORTHO05D004890 3.7e-29 132.5 161 45.3
BcaC05g28028 Brassica carinata HOM05D004187 ORTHO05D004890 3.7e-29 132.5 160 42.5
C05p40440 Brassica napus HOM05D004187 ORTHO05D004890 3.7e-29 132.5 160 42.5
BolC5t32785H Brassica oleracea HOM05D004187 ORTHO05D004890 3.7e-29 132.5 160 42.5
Ciclev10005993m.g Citrus clementina HOM05D004187 ORTHO05D004890 8.2e-29 131.3 125 49.6
ECA233G0410 Erigeron canadensis HOM05D004187 ORTHO05D004890 8.2e-29 131.3 128 52.3
Hma1.2p1_0207F.1_g088010 Hydrangea macrophylla HOM05D004187 ORTHO05D004890 8.2e-29 131.3 149 45.6
Lj1g0009372 Lotus japonicus HOM05D004187 ORTHO05D004890 8.2e-29 131.3 205 39.5
PSO210G5857 Papaver somniferum HOM05D004187 ORTHO05D004890 8.2e-29 131.3 126 50.0
THA.LOC104808564 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 8.2e-29 131.3 153 44.4
Thhalv10017318m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 1.1e-28 131.0 128 46.9
Lj3A731T58 Lonicera japonica HOM05D004187 ORTHO05D004890 1.1e-28 131.0 147 42.9
Lj1g0011366 Lotus japonicus HOM05D004187 ORTHO05D004890 1.1e-28 131.0 205 39.5
Peaxi162Scf00092g00016 Petunia axillaris HOM05D004187 ORTHO05D004890 1.1e-28 131.0 133 48.1
HanXRQChr08g0219391 Helianthus annuus HOM05D004187 ORTHO05D004890 1.4e-28 130.6 128 53.1
BraA05t21487Z Brassica rapa HOM05D004187 ORTHO05D004890 1.8e-28 130.2 161 42.9
MSTRG.4047 Avicennia marina HOM05D004187 ORTHO05D004890 2.4e-28 129.8 156 45.5
DCAR_031726 Daucus carota HOM05D004187 ORTHO05D004890 4.1e-28 129.0 123 49.6
Atru.chr4.2417 Acer truncatum HOM05D004187 ORTHO05D004890 5.3e-28 128.6 127 47.2
BcaC01g03429 Brassica carinata HOM05D004187 ORTHO05D004890 5.3e-28 128.6 160 43.8
BcaC01g03430 Brassica carinata HOM05D004187 ORTHO05D004890 5.3e-28 128.6 160 43.8
C03p52670 Brassica napus HOM05D004187 ORTHO05D004890 5.3e-28 128.6 160 43.8
BolC3t17535H Brassica oleracea HOM05D004187 ORTHO05D004890 5.3e-28 128.6 160 43.8
CDE07G0031 Ceratophyllum demersum HOM05D004187 ORTHO05D004890 5.3e-28 128.6 154 46.8
AUR62001090 Chenopodium quinoa HOM05D004187 ORTHO05D004890 5.3e-28 128.6 149 45.0
COL.COLO4_15044 Corchorus olitorius HOM05D004187 ORTHO05D004890 5.3e-28 128.6 215 37.7
Psat2g190480 Pisum sativum HOM05D004187 ORTHO05D004890 5.3e-28 128.6 132 45.5
ECA247G1582 Erigeron canadensis HOM05D004187 ORTHO05D004890 7.0e-28 128.3 188 43.6
Aa31LG3G2350 Aethionema arabicum HOM05D004187 ORTHO05D004890 9.1e-28 127.9 129 51.2
Sp3g20440 Schrenkiella parvula HOM05D004187 ORTHO05D004890 1.6e-27 127.1 165 42.4
Sopen10g014270 Solanum pennellii HOM05D004187 ORTHO05D004890 2.0e-27 126.7 132 47.0
Ca_12246_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 2.7e-27 126.3 116 50.9
Cc10_g08560 Coffea canephora HOM05D004187 ORTHO05D004890 2.7e-27 126.3 147 46.3
ATR0665G390 Amborella trichopoda HOM05D004187 ORTHO05D004890 3.5e-27 125.9 127 48.0
A03p42920 Brassica napus HOM05D004187 ORTHO05D004890 4.5e-27 125.6 166 41.6
BraA03t13436Z Brassica rapa HOM05D004187 ORTHO05D004890 4.5e-27 125.6 166 41.6
Nitab4.5_0000085g0360 Nicotiana tabacum HOM05D004187 ORTHO05D004890 5.9e-27 125.2 127 48.0
Phvul.008G010500 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 1.0e-26 124.4 127 48.0
Atru.chr4.2392 Acer truncatum HOM05D004187 ORTHO05D004890 1.3e-26 124.0 177 41.2
Lalb_Chr10g0091621 Lupinus albus HOM05D004187 ORTHO05D004890 2.9e-26 122.9 127 45.7
Nitab4.5_0001547g0030 Nicotiana tabacum HOM05D004187 ORTHO05D004890 5.0e-26 122.1 126 46.8
PGSC0003DMG402028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 6.5e-26 121.7 120 49.2
HPP92_009615 Vanilla planifolia HOM05D004187 ORTHO05D004890 6.5e-26 121.7 178 37.1
CAN.G1402.3 Capsicum annuum HOM05D004187 ORTHO05D004890 8.5e-26 121.3 187 36.9
Manes.03G175300 Manihot esculenta HOM05D004187 ORTHO05D004890 8.5e-26 121.3 147 41.5
PGSC0003DMG401028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 8.5e-26 121.3 158 42.4
SalBow2G2347 Salvia bowleyana HOM05D004187 ORTHO05D004890 1.1e-25 120.9 171 39.2
Solyc10g045190.3 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.5e-25 120.6 120 49.2
Duzib114G0324 Durio zibethinus HOM05D004187 ORTHO05D004890 1.9e-25 120.2 121 47.9
Solyc09g082480.2 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.9e-25 120.2 128 43.8
PGSC0003DMG400039476 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.9e-25 120.2 120 48.3
Thhalv10029384m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 2.5e-25 119.8 150 40.7
Peaxi162Scf00245g00106 Petunia axillaris HOM05D004187 ORTHO05D004890 2.5e-25 119.8 166 37.3
SalBow2G0844 Salvia bowleyana HOM05D004187 ORTHO05D004890 3.2e-25 119.4 171 39.2
Manes.12G002301 Manihot esculenta HOM05D004187 ORTHO05D004890 6.1e-24 115.2 117 47.9
Lsat_1_v5_gn_8_21341 Lactuca sativa HOM05D004187 ORTHO05D004890 8.0e-24 114.8 128 45.3
Migut.G00365 Erythranthe guttata HOM05D004187 ORTHO05D004890 1.4e-23 114.0 127 44.1
Atru.chr7.913 Acer truncatum HOM05D004187 ORTHO05D004890 3.0e-23 112.8 117 43.6
Sopen09g031340 Solanum pennellii HOM05D004187 ORTHO05D004890 4.0e-23 112.5 128 42.2
AUR62001087 Chenopodium quinoa HOM05D004187 ORTHO05D004890 5.2e-23 112.1 90 54.4
PGSC0003DMG400040737 Solanum tuberosum HOM05D004187 ORTHO05D004890 5.2e-23 112.1 116 46.6
SGA_v2.0_scaffold191G40487 Striga asiatica HOM05D004187 ORTHO05D004890 5.2e-23 112.1 139 41.7
unitig_22.g6822 Utricularia gibba HOM05D004187 ORTHO05D004890 2.6e-22 109.8 144 41.0
PGSC0003DMG400039782 Solanum tuberosum HOM05D004187 ORTHO05D004890 3.4e-22 109.4 92 52.2
Atru.chr1.2920 Acer truncatum HOM05D004187 ORTHO05D004890 5.7e-22 108.6 152 38.2
Sopen09g031300 Solanum pennellii HOM05D004187 ORTHO05D004890 8.3e-21 104.8 120 42.5
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 4.1e-20 102.4 187 39.6
PGSC0003DMG400032269 Solanum tuberosum HOM05D004187 ORTHO05D004890 3.5e-19 99.4 82 52.4
Sopen09g031290 Solanum pennellii HOM05D004187 ORTHO05D004890 4.2e-17 92.4 105 42.9
Nn6g35138 Nelumbo nucifera HOM05D004187 ORTHO05D004890 1.6e-16 90.5 116 43.1
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 6.1e-16 88.6 192 34.4
Solyc09g082420.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.8e-15 87.0 97 45.4
Solyc09g082430.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 2.3e-15 86.7 104 43.3
PGSC0003DMG400032265 Solanum tuberosum HOM05D004187 ORTHO05D004890 2.8e-13 79.7 66 50.0
Solyc09g082440.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 3.1e-12 76.3 67 50.7
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 4.1e-12 75.9 132 36.4
PGSC0003DMG400013771 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.6e-11 73.9 106 39.6
Sabra10G0059200 Salix brachista HOM05D004187 ORTHO05D004890 5.6e-09 65.5 63 50.8
BcaB03g14654 Brassica carinata HOM05D004187 ORTHO05D004890 1.2e-06 57.8 70 37.1


User provided reference genes

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