Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 2618.2 1320 100.0
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 2528.8 1320 96.8
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 2189.5 1319 83.1
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1953.7 1334 72.9
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1930.2 1328 73.2
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1929.8 1328 73.2
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1928.7 1328 73.1
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1926.8 1325 72.5
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1925.6 1328 73.0
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1922.1 1332 71.9
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1914.0 1328 72.7
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1911.0 1326 72.1
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1906.0 1330 72.0
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1906.0 1336 72.2
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1903.3 1330 71.6
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1899.0 1334 71.3
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1894.4 1330 71.7
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1890.9 1331 72.2
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1890.2 1330 71.7
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1885.5 1335 70.6
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1877.8 1332 71.3
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1877.1 1327 71.1
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1875.9 1327 71.2
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1867.8 1247 75.7
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1860.5 1330 70.2
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1858.2 1335 70.5
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1833.9 1244 74.0
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1825.4 1331 68.9
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1815.4 1326 68.3
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1815.0 1332 68.9
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1810.8 1332 68.2
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1801.6 1326 68.2
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1796.2 1244 72.7
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1789.2 1327 67.7
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1782.7 1328 67.2
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1775.8 1328 67.1
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1765.7 1329 67.2
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1762.3 1329 66.8
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1759.6 1341 66.4
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1755.0 1278 68.2
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1753.8 1330 66.7
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1749.9 1325 66.2
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1748.4 1321 68.1
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1747.3 1324 66.2
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1746.5 1330 66.5
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1744.2 1328 66.6
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1743.8 1325 66.0
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1743.0 1326 65.9
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1740.7 1325 66.4
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1738.8 1270 68.7
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1735.3 1349 64.9
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1728.4 1346 65.8
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1728.4 1330 66.2
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1714.5 1338 65.0
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1714.5 1323 65.8
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1707.6 1346 65.3
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1705.6 1328 64.1
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1699.1 1333 64.7
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1697.9 1096 78.1
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1692.2 1334 64.3
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1686.8 1258 67.0
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1686.0 1327 63.9
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1684.8 1332 64.3
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1682.2 1241 67.3
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1679.5 1343 63.5
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1671.4 1333 63.5
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1652.5 1100 74.5
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1641.3 1322 62.9
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1631.7 1331 62.4
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1627.1 1330 62.3
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1610.1 1330 62.0
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1609.3 1332 61.6
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1609.3 1332 61.6
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1603.2 1330 62.0
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1603.2 1330 61.9
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1598.2 1330 62.5
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1595.5 1334 61.4
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1593.9 1330 61.7
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1588.5 1358 60.0
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1578.5 1286 64.9
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1576.6 1326 60.9
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1576.2 1324 61.2
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1567.0 1319 61.6
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1564.7 1195 65.9
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1558.1 940 81.7
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1551.6 1130 68.7
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1544.6 1110 68.3
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1522.7 1091 69.6
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1513.4 1329 59.4
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1472.6 1556 52.4
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1470.7 1341 55.7
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1443.7 1148 64.1
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1432.9 1324 55.0
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1431.8 1324 58.8
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1392.1 1355 54.4
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1391.3 1322 54.9
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1266.9 906 69.1
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1237.2 863 72.5
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1218.8 1347 51.2
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1134.4 756 75.8
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1110.1 1264 48.6
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.1e-256 891.0 1377 38.9
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.5e-235 820.8 1306 38.4
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 9.4e-235 818.1 1160 41.0
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 2.8e-231 806.6 853 49.2
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 1.3e-228 797.7 1197 39.8
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.3e-215 754.6 803 51.8
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 2.5e-163 580.9 1499 30.6
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 5.0e-151 540.0 358 76.3
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 5.5e-142 510.0 460 58.9
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 5.5e-134 483.4 379 63.1
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 4.0e-92 344.4 1370 26.9
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 2.0e-88 332.0 1535 25.6
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 1.1e-86 326.2 255 61.2
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 9.5e-86 323.2 302 54.6
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 8.1e-85 320.1 332 53.0
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 4.6e-72 277.7 196 76.0
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 2.9e-66 258.5 1281 25.7
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 8.1e-61 240.4 233 52.8
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 8.4e-58 230.3 256 48.8
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 6.0e-56 224.2 167 73.1
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 4.5e-51 208.0 1350 25.3
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 7.1e-41 174.1 130 69.2
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 2.7e-40 172.2 289 43.3
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.3e-37 163.3 121 69.4
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 3.6e-32 145.2 139 56.8


User provided reference genes

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