Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 2.6e-181 638.6 329 100.0
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 3.4e-125 452.2 332 72.9
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 7.1e-115 417.9 329 66.9
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 7.1e-115 417.9 331 67.1
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 9.2e-115 417.5 329 66.9
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 1.7e-113 413.3 329 66.9
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.3e-112 409.1 329 66.3
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 2.1e-111 406.4 331 65.6
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.9e-110 401.4 339 64.3
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 6.9e-110 401.4 329 65.7
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 1.2e-109 400.6 331 66.5
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 9.9e-109 397.5 329 64.7
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 8.4e-108 394.4 329 64.1
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 2.4e-107 392.9 329 62.3
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 2.4e-107 392.9 331 63.4
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 3.2e-107 392.5 329 63.5
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 7.1e-107 391.3 331 64.4
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.2e-106 390.6 331 62.2
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.1e-106 389.8 331 61.9
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 2.7e-106 389.4 330 62.7
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 4.6e-106 388.7 331 61.3
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 6.0e-106 388.3 330 62.1
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 7.8e-106 387.9 328 61.6
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 7.8e-106 387.9 328 61.3
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 1.0e-105 387.5 364 59.6
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 1.0e-105 387.5 364 59.6
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 1.7e-105 386.7 328 61.3
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.3e-105 386.3 330 63.0
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 2.3e-105 386.3 328 60.7
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 3.0e-105 386.0 329 62.9
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 3.9e-105 385.6 328 61.6
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 5.1e-105 385.2 329 61.7
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 6.6e-105 384.8 332 61.4
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 6.6e-105 384.8 328 60.7
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 1.1e-104 384.0 330 61.2
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 1.1e-104 384.0 329 61.4
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.5e-104 383.6 330 61.2
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 1.5e-104 383.6 329 62.0
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 1.9e-104 383.3 330 62.1
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 2.5e-104 382.9 330 61.2
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 3.3e-104 382.5 329 61.1
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 3.3e-104 382.5 330 61.8
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 5.6e-104 381.7 330 60.9
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 7.3e-104 381.3 330 62.4
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 9.6e-104 380.9 330 60.9
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 9.6e-104 380.9 329 61.1
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 9.6e-104 380.9 328 61.3
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 1.6e-103 380.2 329 62.3
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 2.1e-103 379.8 329 60.5
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 6.2e-103 378.3 329 61.1
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 1.1e-102 377.5 330 60.9
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-102 377.1 331 60.7
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.8e-102 376.7 329 60.8
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.8e-102 376.7 329 60.8
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.4e-102 376.3 332 60.5
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 2.4e-102 376.3 329 60.8
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 2.4e-102 376.3 328 60.7
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.1e-102 375.9 331 60.7
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.0e-102 375.6 331 60.4
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.0e-102 375.6 331 60.4
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 9.0e-102 374.4 342 59.6
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 9.0e-102 374.4 329 59.9
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 1.5e-101 373.6 328 60.4
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 2.6e-101 372.9 329 60.5
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 3.4e-101 372.5 330 59.4
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 9.9e-101 370.9 331 58.9
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 1.7e-100 370.2 328 61.3
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 2.9e-100 369.4 343 58.0
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 8.4e-100 367.9 331 60.1
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 1.4e-99 367.1 328 58.2
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 2.4e-99 366.3 329 61.1
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 7.1e-99 364.8 329 60.5
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 7.1e-99 364.8 330 59.1
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.6e-98 363.6 329 59.0
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 4.6e-98 362.1 331 58.9
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 4.6e-98 362.1 331 58.9
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.0e-98 361.7 329 58.7
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.0e-98 361.7 329 58.7
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.0e-98 361.7 329 59.3
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.8e-97 360.1 329 59.3
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 1.8e-97 360.1 331 59.8
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 2.3e-97 359.8 329 59.0
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 6.7e-97 358.2 356 57.3
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.1e-96 357.5 329 59.0
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.9e-96 356.7 401 51.1
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 2.5e-96 356.3 330 57.9
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 2.5e-96 356.3 329 58.7
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 5.6e-96 355.1 332 57.8
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 4.8e-95 352.1 351 53.8
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 6.2e-95 351.7 332 57.5
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 1.1e-94 350.9 329 57.4
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 1.4e-94 350.5 329 57.4
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 2.4e-94 349.7 331 58.6
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.2e-93 347.4 329 57.8
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 2.6e-93 346.3 313 58.8
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 5.8e-93 345.1 315 60.6
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 7.6e-93 344.7 354 53.7
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 7.6e-93 344.7 329 57.1
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 9.9e-93 344.4 331 58.0
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 3.8e-92 342.4 337 59.6
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 3.8e-92 342.4 314 59.2
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 4.9e-92 342.0 329 57.1
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 6.4e-92 341.7 364 52.7
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 8.4e-92 341.3 332 57.5
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 8.4e-92 341.3 331 55.9
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 1.9e-91 340.1 328 56.1
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 4.2e-91 339.0 329 57.4
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 5.5e-91 338.6 328 55.5
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 7.1e-91 338.2 331 56.5
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 2.1e-90 336.7 295 63.1
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.1e-90 336.7 345 55.1
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 6.0e-90 335.1 335 55.2
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 5.6e-88 328.6 331 56.8
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 6.9e-86 321.6 334 55.4
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 2.0e-85 320.1 334 53.3
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 2.0e-85 320.1 390 48.7
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 7.6e-85 318.2 289 59.5
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 3.8e-84 315.8 230 68.3
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 6.5e-84 315.1 289 58.1
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.2e-83 312.4 308 55.5
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.5e-83 312.0 290 58.6
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 9.3e-83 311.2 291 58.4
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 9.3e-83 311.2 332 53.9
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 2.1e-82 310.1 234 65.8
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 7.9e-82 308.1 332 53.6
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 1.3e-79 300.8 330 51.5
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 4.8e-79 298.9 336 51.8
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.4e-78 297.4 329 53.5
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 4.1e-78 295.8 319 52.4
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 9.0e-78 294.7 290 56.9
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 3.4e-77 292.7 326 50.9
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 2.2e-76 290.0 289 54.7
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 3.0e-73 279.6 418 44.5
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 1.8e-70 270.4 294 53.1
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 3.8e-68 262.7 326 47.5
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 4.2e-67 259.2 329 47.7
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 2.7e-66 256.5 229 59.4
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 4.7e-66 255.8 176 72.7
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 7.9e-66 255.0 201 64.7
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.1e-64 251.1 238 58.0
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 2.2e-63 246.9 173 68.8
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 3.7e-63 246.1 333 44.1
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 2.6e-61 240.0 172 66.9
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 3.2e-59 233.0 173 67.1
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 6.7e-57 225.3 240 52.5
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 6.7e-57 225.3 327 42.5
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 6.7e-57 225.3 161 67.1
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.1e-56 224.6 175 64.0
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 2.0e-56 223.8 319 43.3
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 7.4e-56 221.9 148 70.9
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 9.7e-56 221.5 332 42.5
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 3.5e-53 213.0 330 40.6
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 1.7e-52 210.7 169 63.9
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 3.8e-52 209.5 141 70.2
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 1.7e-47 194.1 131 71.8
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.7e-47 194.1 268 43.7
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 1.8e-46 190.7 199 51.8
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 7.0e-46 188.7 221 48.9
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 1.7e-44 184.1 212 49.5
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 4.2e-43 179.5 151 62.9
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.7e-42 176.0 125 68.0
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.0e-41 172.9 204 51.0
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.7e-39 167.5 142 60.6
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 3.8e-36 156.4 291 38.1
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.4e-30 137.1 91 75.8
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 4.1e-30 136.3 192 46.4
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 5.4e-30 136.0 270 34.8
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 7.0e-30 135.6 221 37.1
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 3.3e-27 126.7 88 71.6
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 8.0e-26 122.1 72 80.6
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.4e-24 116.3 221 34.8
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.1e-22 111.7 74 70.3
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.9e-19 100.9 171 40.4
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 4.3e-19 99.8 209 39.7
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 7.3e-19 99.0 71 71.8
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 2.2e-15 87.4 74 56.8
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.1e-09 68.6 138 33.3
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 4.0e-09 66.6 129 36.4
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 4.4e-08 63.2 39 84.6
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.7e-07 61.2 34 79.4
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 2.9e-07 60.5 56 51.8


User provided reference genes

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