Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11429 Corylus avellana HOM05D006602 ORTHO05D007927 1.9e-192 675.6 335 100.0
Cfa014754 Carpinus fangiana HOM05D006602 ORTHO05D007927 4.0e-174 614.8 337 91.7
QL06p020003 Quercus lobata HOM05D006602 ORTHO05D007927 1.8e-118 429.9 337 68.0
CiPaw.01G180800 Carya illinoinensis HOM05D006602 ORTHO05D007927 5.3e-118 428.3 337 67.1
Dinv27089 Davidia involucrata HOM05D006602 ORTHO05D007927 3.7e-79 299.3 338 50.3
Prupe.1G045200 Prunus persica HOM05D006602 ORTHO05D007927 5.4e-78 295.4 347 50.7
MD13G1218500 Malus domestica HOM05D006602 ORTHO05D007927 1.7e-76 290.4 342 49.1
Atru.chr4.1980 Acer truncatum HOM05D006602 ORTHO05D007927 1.5e-75 287.3 338 50.6
RcHm_v2.0_Chr4g0394621 Rosa chinensis HOM05D006602 ORTHO05D007927 1.5e-75 287.3 334 48.5
GSVIVG01027871001 Vitis vinifera HOM05D006602 ORTHO05D007927 1.7e-71 273.9 338 48.2
Ciclev10004248m.g Citrus clementina HOM05D006602 ORTHO05D007927 2.2e-71 273.5 337 47.5
FvH4_4g04160 Fragaria vesca HOM05D006602 ORTHO05D007927 4.9e-71 272.3 342 47.7
FAN22G1758 Fragaria x ananassa HOM05D006602 ORTHO05D007927 6.4e-71 271.9 334 48.8
FAN17G1576 Fragaria x ananassa HOM05D006602 ORTHO05D007927 2.7e-69 266.5 324 46.6
FAN12G1920 Fragaria x ananassa HOM05D006602 ORTHO05D007927 8.6e-68 261.5 334 47.6
Manes.03G161700 Manihot esculenta HOM05D006602 ORTHO05D007927 8.6e-68 261.5 338 47.3
TAR636G1896 Trochodendron aralioides HOM05D006602 ORTHO05D007927 1.9e-67 260.4 338 47.6
Potri.010G068400 Populus trichocarpa HOM05D006602 ORTHO05D007927 4.0e-65 252.7 349 43.0
Eucgr.H02994 Eucalyptus grandis HOM05D006602 ORTHO05D007927 3.2e-62 243.0 338 44.4
CANSAT78G1730 Cannabis sativa HOM05D006602 ORTHO05D007927 7.1e-62 241.9 338 44.1
Sabra08G0129700 Salix brachista HOM05D006602 ORTHO05D007927 2.8e-58 229.9 336 42.0
Lj6g0020892 Lotus japonicus HOM05D006602 ORTHO05D007927 2.4e-57 226.9 345 42.9
Sabra10G0038600 Salix brachista HOM05D006602 ORTHO05D007927 2.4e-57 226.9 349 41.0
Thecc.04G260100 Theobroma cacao HOM05D006602 ORTHO05D007927 3.1e-57 226.5 442 34.6
Rhsim02G0042400 Rhododendron simsii HOM05D006602 ORTHO05D007927 4.0e-57 226.1 347 43.5
vmacro15464 Vaccinium macrocarpon HOM05D006602 ORTHO05D007927 5.2e-57 225.7 339 42.2
CSS0038498 Camellia sinensis var. sinensis HOM05D006602 ORTHO05D007927 1.3e-55 221.1 338 41.1
Nn2g12538 Nelumbo nucifera HOM05D006602 ORTHO05D007927 1.9e-54 217.2 340 41.5
Glyma.10G005000 Glycine max HOM05D006602 ORTHO05D007927 2.4e-54 216.9 339 41.3
Lalb_Chr01g0021011 Lupinus albus HOM05D006602 ORTHO05D007927 3.0e-52 209.9 337 42.4
COL.COLO4_15932 Corchorus olitorius HOM05D006602 ORTHO05D007927 7.3e-51 205.3 427 35.4
Cc03_g05910 Coffea canephora HOM05D006602 ORTHO05D007927 9.6e-51 204.9 360 38.9
TWI09G0121 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 9.6e-51 204.9 341 42.2
TWI09G1114 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 9.6e-51 204.9 341 42.2
VMungo0720G1075 Vigna mungo HOM05D006602 ORTHO05D007927 4.8e-50 202.6 346 41.9
MBI10_g19236_MAGBIO Magnolia biondii HOM05D006602 ORTHO05D007927 3.1e-49 199.9 342 38.0
Gohir.D10G157900 Gossypium hirsutum HOM05D006602 ORTHO05D007927 6.9e-49 198.7 442 34.6
CsaV3_2G012590 Cucumis sativus L. HOM05D006602 ORTHO05D007927 1.2e-48 198.0 335 39.7
DCAR_002305 Daucus carota HOM05D006602 ORTHO05D007927 1.5e-48 197.6 369 39.0
Aqoxy5G00174 Aquilegia oxysepala HOM05D006602 ORTHO05D007927 9.9e-48 194.9 336 39.0
Gohir.A10G109300 Gossypium hirsutum HOM05D006602 ORTHO05D007927 1.7e-47 194.1 434 33.6
Peaxi162Scf00602g00056 Petunia axillaris HOM05D006602 ORTHO05D007927 1.7e-47 194.1 366 37.2
Gorai.011G177400 Gossypium raimondii HOM05D006602 ORTHO05D007927 3.8e-47 193.0 435 33.8
MSTRG.9876 Avicennia marina HOM05D006602 ORTHO05D007927 1.9e-46 190.7 364 36.3
MELO3C023018.2 Cucumis melo HOM05D006602 ORTHO05D007927 2.4e-46 190.3 328 38.1
ClCG06G007140 Citrullus lanatus HOM05D006602 ORTHO05D007927 5.4e-46 189.1 350 37.1
Sc13g0005920 Simmondsia chinensis HOM05D006602 ORTHO05D007927 1.2e-45 188.0 345 38.0
Cpa.g.sc44.24 Carica papaya HOM05D006602 ORTHO05D007927 3.5e-45 186.4 340 39.4
Sed0025551 Sechium edule HOM05D006602 ORTHO05D007927 3.9e-44 183.0 349 37.8
Nitab4.5_0001425g0110 Nicotiana tabacum HOM05D006602 ORTHO05D007927 8.7e-44 181.8 370 37.6
PGR004G1839 Punica granatum HOM05D006602 ORTHO05D007927 1.1e-43 181.4 342 38.3
Medtr1g041735 Medicago truncatula HOM05D006602 ORTHO05D007927 4.3e-43 179.5 340 38.8
SalBow3G2492 Salvia bowleyana HOM05D006602 ORTHO05D007927 7.4e-43 178.7 349 37.5
Lj6A624G54 Lonicera japonica HOM05D006602 ORTHO05D007927 1.3e-42 177.9 393 36.9
Migut.G00495 Erythranthe guttata HOM05D006602 ORTHO05D007927 2.1e-42 177.2 339 38.9
Nitab4.5_0006936g0050 Nicotiana tabacum HOM05D006602 ORTHO05D007927 2.8e-42 176.8 391 34.5
PSO423G0061 Papaver somniferum HOM05D006602 ORTHO05D007927 4.8e-42 176.0 338 36.7
Ca_12143_v3 Cicer arietinum L. HOM05D006602 ORTHO05D007927 6.2e-42 175.6 342 38.3
Hund11918 Selenicereus undatus HOM05D006602 ORTHO05D007927 2.4e-41 173.7 362 37.0
SGA_v2.0_scaffold67G22733 Striga asiatica HOM05D006602 ORTHO05D007927 6.9e-41 172.2 364 36.5
Psat6g105120 Pisum sativum HOM05D006602 ORTHO05D007927 3.4e-40 169.9 347 34.9
AUR62015537 Chenopodium quinoa HOM05D006602 ORTHO05D007927 9.9e-40 168.3 368 37.8
ECA248G0430 Erigeron canadensis HOM05D006602 ORTHO05D007927 1.7e-39 167.5 339 37.5
AUR62002172 Chenopodium quinoa HOM05D006602 ORTHO05D007927 6.4e-39 165.6 367 36.0
CDE02G3785 Ceratophyllum demersum HOM05D006602 ORTHO05D007927 8.4e-39 165.2 363 35.0
AT2G33435 Arabidopsis thaliana HOM05D006602 ORTHO05D007927 1.1e-38 164.9 341 33.7
Duzib151G0058 Durio zibethinus HOM05D006602 ORTHO05D007927 1.4e-38 164.5 385 32.7
CARHR127450 Cardamine hirsuta HOM05D006602 ORTHO05D007927 3.2e-38 163.3 338 35.2
TPR.G25155 Trifolium pratense HOM05D006602 ORTHO05D007927 4.2e-38 162.9 355 33.0
Aa31LG5G3850 Aethionema arabicum HOM05D006602 ORTHO05D007927 5.5e-38 162.5 333 35.4
PSO079G0005 Papaver somniferum HOM05D006602 ORTHO05D007927 1.6e-37 161.0 338 35.5
Solyc09g090420.4 Solanum lycopersicum HOM05D006602 ORTHO05D007927 3.0e-36 156.8 400 32.2
HanXRQChr04g0115381 Helianthus annuus HOM05D006602 ORTHO05D007927 6.7e-36 155.6 335 33.7
Sopen09g033330 Solanum pennellii HOM05D006602 ORTHO05D007927 6.7e-36 155.6 400 32.0
Thhalv10016911m.g Eutrema salsugineum HOM05D006602 ORTHO05D007927 2.5e-35 153.7 340 33.5
ATR0736G103 Amborella trichopoda HOM05D006602 ORTHO05D007927 4.3e-35 152.9 353 34.3
AL4G29110 Arabidopsis lyrata HOM05D006602 ORTHO05D007927 7.4e-35 152.1 335 33.7
Carub.0004s1507 Capsella rubella HOM05D006602 ORTHO05D007927 1.3e-34 151.4 338 33.1
RcHm_v2.0_Chr4g0394661 Rosa chinensis HOM05D006602 ORTHO05D007927 1.3e-34 151.4 126 59.5
THA.LOC104801076 Tarenaya hassleriana HOM05D006602 ORTHO05D007927 1.3e-34 151.4 335 34.9
Oeu002939.1 Olea europaea HOM05D006602 ORTHO05D007927 2.1e-34 150.6 332 34.3
C03p21910 Brassica napus HOM05D006602 ORTHO05D007927 1.4e-33 147.9 338 32.5
BraA03t11135Z Brassica rapa HOM05D006602 ORTHO05D007927 1.8e-33 147.5 343 31.2
A03p18750 Brassica napus HOM05D006602 ORTHO05D007927 6.9e-33 145.6 336 31.8
Glyma.02G003600 Glycine max HOM05D006602 ORTHO05D007927 1.5e-32 144.4 210 44.3
BolC3t14573H Brassica oleracea HOM05D006602 ORTHO05D007927 4.5e-32 142.9 352 30.7
unitig_32.g10852 Utricularia gibba HOM05D006602 ORTHO05D007927 5.8e-32 142.5 350 33.1
EL10Ac3g04970 Beta vulgaris HOM05D006602 ORTHO05D007927 9.3e-30 135.2 353 31.2
HPP92_005119 Vanilla planifolia HOM05D006602 ORTHO05D007927 1.2e-29 134.8 340 30.9
SEGI_08720 Sequoiadendron giganteum HOM05D006602 ORTHO05D007927 6.0e-29 132.5 348 31.0
Mapoly0007s0229 Marchantia polymorpha HOM05D006602 ORTHO05D007927 6.3e-26 122.5 354 31.4
Hma1.2p1_0385F.1_g141200 Hydrangea macrophylla HOM05D006602 ORTHO05D007927 3.6e-21 106.7 89 62.9
Lsat_1_v5_gn_1_75121 Lactuca sativa HOM05D006602 ORTHO05D007927 6.7e-20 102.4 103 53.4
AagrBONN_evm.TU.Sc2ySwM_344.2542 Anthoceros agrestis HOM05D006602 ORTHO05D007927 3.2e-14 83.6 103 38.8
Os01g0956600 Oryza sativa ssp. japonica HOM05D006602 ORTHO05D007927 4.2e-14 83.2 110 44.5
Glyma.02G003650 Glycine max HOM05D006602 ORTHO05D007927 1.4e-12 78.2 57 59.6
Zm00001eb402770 Zea mays HOM05D006602 ORTHO05D007927 2.3e-12 77.4 82 50.0
Phvul.007G275200 Phaseolus vulgaris HOM05D006602 ORTHO05D007927 1.3e-10 71.6 52 73.1


User provided reference genes

Program Settings