Gene: AT2G33435

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G33435
  • Transcript Identifier AT2G33435.1
  • Gene Type Coding gene
  • Location Chr2 : 14166037-14173226 : positive

Gene Family Information

  • ID HOM05D006602
  • #Genes/#Species 121/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G33435.1
  • uniprot F4IVU7

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein
  • Computational description RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.1); Has 62164 Blast hits to 35633 proteins in 1636 species: Archae - 185; Bacteria - 4712; Metazoa - 29770; Fungi - 5811; Plants - 3284; Viruses - 214; Other Eukaryotes - 18188 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008187
IBA
Gene Ontologypoly-pyrimidine tract binding1
GO:0030628
IBA
Gene Ontologypre-mRNA 3'-splice site binding1
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0071004
IBA
Gene OntologyU2-type prespliceosome1
GO:0016607
IBA
Gene Ontologynuclear speck1
GO:0089701
IBA
Gene OntologyU2AF complex1
GO:0000243
IBA
Gene Ontologycommitment complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated