Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10423 Corylus avellana HOM05D039774 ORTHO05D034140 7.5e-175 617.1 310 100.0
Haze_10418 Corylus avellana HOM05D039774 ORTHO05D034140 2.0e-143 512.7 289 92.7
arahy.Tifrunner.gnm1.ann1.LN6NXX Arachis hypogaea HOM05D000319 ORTHO05D000903 1.7e-09 67.8 169 33.7
arahy.Tifrunner.gnm1.ann1.RGHX4L Arachis hypogaea HOM05D000319 ORTHO05D000903 2.2e-09 67.4 169 33.7
arahy.Tifrunner.gnm1.ann1.JP0LY8 Arachis hypogaea HOM05D000319 ORTHO05D012272 6.4e-09 65.9 173 32.4
Lj1g0006325 Lotus japonicus HOM05D000319 ORTHO05D000903 1.9e-08 64.3 186 30.6
Actinidia21064 Actinidia chinensis HOM05D000319 ORTHO05D000903 2.4e-08 63.9 172 30.8
vmacro14987 Vaccinium macrocarpon HOM05D000319 ORTHO05D000903 2.4e-08 63.9 172 30.8
Lsat_1_v5_gn_8_54481 Lactuca sativa HOM05D000319 ORTHO05D000903 5.4e-08 62.8 239 28.0
TPR.G22214 Trifolium pratense HOM05D000319 ORTHO05D000903 5.4e-08 62.8 193 30.6
Eucgr.H03894 Eucalyptus grandis HOM05D000319 ORTHO05D000903 1.2e-07 61.6 175 29.7
Nn3g21390 Nelumbo nucifera HOM05D000319 ORTHO05D000903 1.2e-07 61.6 239 27.2
SEGI_28641 Sequoiadendron giganteum HOM05D000319 ORTHO05D000903 1.6e-07 61.2 179 31.3
FvH4_5g19660 Fragaria vesca HOM05D000319 ORTHO05D000903 2.1e-07 60.8 210 29.5
TPR.G28370 Trifolium pratense HOM05D000319 ORTHO05D000903 2.1e-07 60.8 193 30.1
Eucgr.L02866 Eucalyptus grandis HOM05D000319 ORTHO05D010858 2.7e-07 60.5 172 30.8
Gohir.D10G169400 Gossypium hirsutum HOM05D000319 ORTHO05D000903 3.5e-07 60.1 179 30.7
Gorai.011G188900 Gossypium raimondii HOM05D000319 ORTHO05D000903 3.5e-07 60.1 179 30.7
CSS0025504 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 4.6e-07 59.7 179 30.7
CSS0026292 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 4.6e-07 59.7 179 30.7
FAN18G0364 Fragaria x ananassa HOM05D000319 ORTHO05D000903 4.6e-07 59.7 178 30.9
AagrBONN_evm.TU.Sc2ySwM_362.889 Anthoceros agrestis HOM05D000319 ORTHO05D000903 6.0e-07 59.3 178 30.3
Pp3c6_12900 Physcomitrium patens HOM05D000319 ORTHO05D000903 6.0e-07 59.3 208 28.8
Sabra01G0090100 Salix brachista HOM05D000319 ORTHO05D000903 6.0e-07 59.3 181 30.4
DCAR_024561 Daucus carota HOM05D000319 ORTHO05D000903 7.9e-07 58.9 172 30.2
Dinv19734 Davidia involucrata HOM05D000319 ORTHO05D000903 7.9e-07 58.9 179 31.3
Eucgr.B01285 Eucalyptus grandis HOM05D000319 ORTHO05D000903 7.9e-07 58.9 239 26.4
FAN04G2239 Fragaria x ananassa HOM05D000319 ORTHO05D000903 7.9e-07 58.9 178 30.3
Pp3c16_1640 Physcomitrium patens HOM05D000319 ORTHO05D000903 7.9e-07 58.9 208 28.8
SMO146G0265 Selaginella moellendorffii HOM05D000319 ORTHO05D000903 7.9e-07 58.9 233 27.0
THA.LOC104801259 Tarenaya hassleriana HOM05D000319 ORTHO05D000903 7.9e-07 58.9 179 31.8
Thecc.04G282500 Theobroma cacao HOM05D000319 ORTHO05D000903 7.9e-07 58.9 172 30.8
Rhsim01G0282300 Rhododendron simsii HOM05D000319 ORTHO05D000903 1.0e-06 58.5 172 30.2
RhsimUnG0017700 Rhododendron simsii HOM05D000319 ORTHO05D000903 1.0e-06 58.5 172 30.2
SEGI_22209 Sequoiadendron giganteum HOM05D000319 ORTHO05D000903 1.0e-06 58.5 208 28.8
Mapoly0012s0104 Marchantia polymorpha HOM05D000319 ORTHO05D000903 1.3e-06 58.2 225 29.3
SGA_v2.0_scaffold86G26892 Striga asiatica HOM05D000319 ORTHO05D000903 1.3e-06 58.2 246 26.0
AT1G59790 Arabidopsis thaliana HOM05D000319 ORTHO05D000903 1.8e-06 57.8 286 27.6
CDE01G0396 Ceratophyllum demersum HOM05D000319 ORTHO05D000903 1.8e-06 57.8 179 27.9
Ca_09133_v3 Cicer arietinum L. HOM05D000319 ORTHO05D000903 1.8e-06 57.8 194 29.9
Medtr7g108340 Medicago truncatula HOM05D000319 ORTHO05D000903 1.8e-06 57.8 212 29.7
Potri.001G117200 Populus trichocarpa HOM05D000319 ORTHO05D000903 1.8e-06 57.8 199 28.6
TWI09G0531 Tripterygium wilfordii HOM05D000319 ORTHO05D000903 1.8e-06 57.8 204 28.4
BcaC07g42281 Brassica carinata HOM05D000319 ORTHO05D000903 2.3e-06 57.4 233 24.0
Gohir.A01G030451 Gossypium hirsutum HOM05D000319 ORTHO05D000903 2.3e-06 57.4 179 30.7
Gohir.A09G062400 Gossypium hirsutum HOM05D000319 ORTHO05D000903 2.3e-06 57.4 172 30.2
Gohir.D01G023466 Gossypium hirsutum HOM05D000319 ORTHO05D000903 2.3e-06 57.4 179 30.7
Gohir.D09G061300 Gossypium hirsutum HOM05D000319 ORTHO05D000903 2.3e-06 57.4 172 30.2
Gorai.002G027800 Gossypium raimondii HOM05D000319 ORTHO05D000903 2.3e-06 57.4 179 30.7
Gorai.006G075900 Gossypium raimondii HOM05D000319 ORTHO05D000903 2.3e-06 57.4 172 30.2
Sopen01g028980 Solanum pennellii HOM05D000319 ORTHO05D000903 2.3e-06 57.4 172 29.7
BcaB05g25161 Brassica carinata HOM05D000319 ORTHO05D000903 3.0e-06 57.0 234 24.8
Lsat_1_v5_gn_5_49221 Lactuca sativa HOM05D000319 ORTHO05D000903 3.0e-06 57.0 172 29.1
Oeu011427.2 Olea europaea HOM05D000319 ORTHO05D000903 3.0e-06 57.0 199 28.1
Pp3c5_14660 Physcomitrium patens HOM05D000319 ORTHO05D000903 3.0e-06 57.0 199 30.2
RcHm_v2.0_Chr5g0039521 Rosa chinensis HOM05D000319 ORTHO05D000903 3.0e-06 57.0 196 30.1
HPP92_017215 Vanilla planifolia HOM05D000319 ORTHO05D000903 3.0e-06 57.0 172 29.1
AL2G17050 Arabidopsis lyrata HOM05D000319 ORTHO05D000903 3.9e-06 56.6 223 27.4
FvH4_2g25090 Fragaria vesca HOM05D000319 ORTHO05D000903 3.9e-06 56.6 179 31.3
Lsat_1_v5_gn_3_24140 Lactuca sativa HOM05D000319 ORTHO05D000903 3.9e-06 56.6 172 29.7
DCAR_002806 Daucus carota HOM05D000319 ORTHO05D000903 5.1e-06 56.2 189 28.6
MD16G1171700 Malus domestica HOM05D000319 ORTHO05D000903 5.1e-06 56.2 172 29.7
Prupe.8G255500 Prunus persica HOM05D000319 ORTHO05D000903 5.1e-06 56.2 199 29.6
EL10Ac1g00238 Beta vulgaris HOM05D000319 ORTHO05D000903 6.7e-06 55.8 200 29.0
A10p01610 Brassica napus HOM05D000319 ORTHO05D021959 6.7e-06 55.8 197 28.4
Cfa015371 Carpinus fangiana HOM05D000319 ORTHO05D000903 6.7e-06 55.8 172 30.2
Migut.G00178 Erythranthe guttata HOM05D000319 ORTHO05D000903 6.7e-06 55.8 172 28.5
Nn4g25931 Nelumbo nucifera HOM05D000319 ORTHO05D000903 6.7e-06 55.8 172 30.2
RcHm_v2.0_Chr7g0204391 Rosa chinensis HOM05D000319 ORTHO05D000903 6.7e-06 55.8 197 27.9
Sp6g02480 Schrenkiella parvula HOM05D000319 ORTHO05D000903 6.7e-06 55.8 179 30.7
A09p68440 Brassica napus HOM05D000319 ORTHO05D000903 8.7e-06 55.5 241 26.6
C08p53060 Brassica napus HOM05D000319 ORTHO05D000903 8.7e-06 55.5 241 25.7
BolC8t52820H Brassica oleracea HOM05D000319 ORTHO05D000903 8.7e-06 55.5 241 25.7
BraA09t42187Z Brassica rapa HOM05D000319 ORTHO05D000903 8.7e-06 55.5 241 26.6
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 8.7e-06 55.5 179 30.7
DCAR_027084 Daucus carota HOM05D000319 ORTHO05D000903 8.7e-06 55.5 172 30.2
Duzib151G0035 Durio zibethinus HOM05D000319 ORTHO05D000903 8.7e-06 55.5 204 28.9
FAN13G0014 Fragaria x ananassa HOM05D000319 ORTHO05D000903 8.7e-06 55.5 178 29.2
Gorai.004G088000 Gossypium raimondii HOM05D000319 ORTHO05D000903 8.7e-06 55.5 200 29.5
Oeu021106.1 Olea europaea HOM05D000319 ORTHO05D000903 8.7e-06 55.5 181 29.8
Oeu021107.1 Olea europaea HOM05D000319 ORTHO05D000903 8.7e-06 55.5 181 29.8
Psat1g152360 Pisum sativum HOM05D000319 ORTHO05D000903 8.7e-06 55.5 179 30.2
Psat3g023520 Pisum sativum HOM05D000319 ORTHO05D000903 8.7e-06 55.5 192 30.7
Potri.008G217300 Populus trichocarpa HOM05D000319 ORTHO05D000903 8.7e-06 55.5 172 30.2
Sabra08G0154600 Salix brachista HOM05D000319 ORTHO05D000903 8.7e-06 55.5 172 30.2


User provided reference genes

Program Settings